BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0571900 Os12g0571900|AK102914
(731 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17760.1 | chr1:6110208-6116271 REVERSE LENGTH=735 888 0.0
AT5G41770.1 | chr5:16718021-16720936 FORWARD LENGTH=706 67 4e-11
AT5G45990.1 | chr5:18651324-18653892 FORWARD LENGTH=674 67 4e-11
AT4G24270.2 | chr4:12581765-12587293 REVERSE LENGTH=818 62 1e-09
AT3G51110.1 | chr3:18983711-18984952 FORWARD LENGTH=414 60 4e-09
AT3G13210.1 | chr3:4244921-4247697 FORWARD LENGTH=658 54 2e-07
>AT1G17760.1 | chr1:6110208-6116271 REVERSE LENGTH=735
Length = 734
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/727 (59%), Positives = 547/727 (75%), Gaps = 47/727 (6%)
Query: 2 DIYNVEAAEILANEAQLLPIGEAAPIYEKLLSTFPTAAKYWKQYVEAYMSAKDDEATKQI 61
D Y VE AE LA A PI +A PIYE+LLS +PT+A++WKQYVEA M+ +D+ATKQI
Sbjct: 3 DKYIVEEAEALAKRALHSPIAQATPIYEQLLSLYPTSARFWKQYVEAQMAVNNDDATKQI 62
Query: 62 FSRCLLSCLQINLWRCYINFIRRVNDKRGSDGLEETKKAFDFMLNYVGNDVASGPVWMDY 121
FSRCLL+CLQ+ LW+CYI FIR+V DK+G++G EET KAF+FMLNY+G D+ASGP+W +Y
Sbjct: 63 FSRCLLTCLQVPLWQCYIRFIRKVYDKKGAEGQEETTKAFEFMLNYIGTDIASGPIWTEY 122
Query: 122 IAFLKSMPVVTPQEESHRMTTVRKVYQKAILVPTNHVEQLWKDYENFENSVSRTLAKGLL 181
IAFLKS+P + E+ HR T +RKVY +AIL PT+HVEQLWKDYENFEN+V+R LAKGL+
Sbjct: 123 IAFLKSLPALNLNEDLHRKTALRKVYHRAILTPTHHVEQLWKDYENFENTVNRQLAKGLV 182
Query: 182 SEYQPKFNSAKAVYRERKKYIDDIDWNMLAVPPTGSYKEEQQCMAWKRLLAFEKGNPQRI 241
+EYQPKFNSA+AVYRERKKYI++IDWNMLAVPPTG+ KEE Q +AWK+ L+FEKGNPQRI
Sbjct: 183 NEYQPKFNSARAVYRERKKYIEEIDWNMLAVPPTGTSKEETQWVAWKKFLSFEKGNPQRI 242
Query: 242 DATTANRRVTFTFEQCLMYLYHHPDIWYDYAMWHAKNGSVDSAIKIFQRAVKALPDSGVL 301
D ++ +R+ + +EQCLM LYH+PD+WYDYA WH K+GS D+AIK+FQRA+KA+PDS +L
Sbjct: 243 DTASSTKRIIYAYEQCLMCLYHYPDVWYDYAEWHVKSGSTDAAIKVFQRALKAIPDSEML 302
Query: 302 KYAFAELEESRGAIQPAKAIYESLIAENAGMTSLAHIQFIRFLRRTEGIEAARKYFLDAR 361
KYAFAE+EESRGAIQ AK +YE+++ A SLAHIQ++RFLRR EG+EAARKYFLDAR
Sbjct: 303 KYAFAEMEESRGAIQSAKKLYENILG--ASTNSLAHIQYLRFLRRAEGVEAARKYFLDAR 360
Query: 362 KLPGCTYHVYVAYATMAFCLDKDAKVAQSVFEAGLKRFMHEPGYILEYADFLCRLNDDRN 421
K P CTYHVY+A+ATMAFC+DK+ KVA ++FE GLK +M EP YIL+YADFL RLNDDRN
Sbjct: 361 KSPSCTYHVYIAFATMAFCIDKEPKVAHNIFEEGLKLYMSEPVYILKYADFLTRLNDDRN 420
Query: 422 VRALFERALSLLPPEESIEVWKRFAQFEQTYGDLSSMLKVEQRRKEALSRTSEDALSALE 481
+RALFERALS LP E+S EVWKRF QFEQTYGDL+S+LKVEQR KEALS E+ S E
Sbjct: 421 IRALFERALSTLPVEDSAEVWKRFIQFEQTYGDLASILKVEQRMKEALSGKGEEGSSPPE 480
Query: 482 NTLYDVVSRYSYMDLWPCSTKELDYLSRHEWLAKNIANRGDKSVVLTGGATLGDIRVGSN 541
++L DVVSRYSYMDLWPC++ +LD+L+R E L KN+ + K+ + A +G
Sbjct: 481 SSLQDVVSRYSYMDLWPCTSNDLDHLARQELLVKNLNKKAGKTNLPHVPAAIG------- 533
Query: 542 KKSFPQSSKVVRPEISRMVIYDPRQMKGPDFSTTAS--------------------GYTK 581
S SSKVV P+ S+MV+ DP K +F+++A+ G
Sbjct: 534 --SVASSSKVVYPDTSQMVVQDP--TKKSEFASSANPVAASASNTFPSTVTATATHGSAS 589
Query: 582 EIDEILKRLSPQMMSFITNLPAIEGPSPDMDIVLSVLMQSTLPVGD--KPGSQVPG--PA 637
DEI K P +++F+ NLP ++GP+P++D+VLS+ +QS P G K G P+
Sbjct: 590 TFDEIPKTTPPALVAFLANLPIVDGPTPNVDVVLSICLQSDFPTGQTVKQSFAAKGNPPS 649
Query: 638 TSDLSGPGKSGLNQNGSIHRPPRDGQPTKRKNSERGRAQEEDDTSTTVQSRAMPRDIFRL 697
+D SGP + G R PRD + TKRK+S+R QEEDDT+ TVQS+ +P D+FRL
Sbjct: 650 QNDPSGPTR------GVSQRLPRDRRATKRKDSDR---QEEDDTA-TVQSQPLPTDVFRL 699
Query: 698 RQIQRNR 704
RQ+++ R
Sbjct: 700 RQMRKAR 706
>AT5G41770.1 | chr5:16718021-16720936 FORWARD LENGTH=706
Length = 705
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 15/213 (7%)
Query: 249 RVTFTFEQCLMYLYHHPDIWYDYAMWHAKNGSVDSAIKIFQRAVKALPDSGVLKYAFAEL 308
R +E+ + Y + +W YA + KN V+SA ++ RAV LP L Y + +
Sbjct: 110 RARSVWERAIEGDYRNHTLWLKYAEFEMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHM 169
Query: 309 EESRGAIQPAKAIYESLIAENAGMTSLAHIQFIRFLRRTEGIEAARKYFLDARKLPGCTY 368
EE G I A+ I+E + + + FI+F R IE AR + + C
Sbjct: 170 EEILGNIAGARQIFERWM--DWSPDQQGWLSFIKFELRYNEIERARTIY---ERFVLCHP 224
Query: 369 HV--YVAYATMAFCLDKDAKVA--QSVFEAGLKRFM-HEPGYIL--EYADFLCRLNDDRN 421
V Y+ YA K +VA +SV+E ++ E IL +A+F R +
Sbjct: 225 KVSAYIRYAKFEM---KGGEVARCRSVYERATEKLADDEEAEILFVAFAEFEERCKEVER 281
Query: 422 VRALFERALSLLPPEESIEVWKRFAQFEQTYGD 454
R +++ AL +P + +++++F FE+ YGD
Sbjct: 282 ARFIYKFALDHIPKGRAEDLYRKFVAFEKQYGD 314
>AT5G45990.1 | chr5:18651324-18653892 FORWARD LENGTH=674
Length = 673
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 10/211 (4%)
Query: 249 RVTFTFEQCLMYLYHHPDIWYDYAMWHAKNGSVDSAIKIFQRAVKALPDSGVLKYAFAEL 308
R +E+ L Y + +W YA + KN V++A ++ R+V LP L + +
Sbjct: 96 RARSVWERALEGEYRNHTLWVKYAEFEMKNKFVNNARNVWDRSVTLLPRVDQLWEKYIYM 155
Query: 309 EESRGAIQPAKAIYESLIAENAGMTSLAHIQFIRFLRRTEGIEAARKYFLDARKLPGCTY 368
EE G + A+ I+E + N A + FI+F R IE AR + + C
Sbjct: 156 EEKLGNVTGARQIFERWM--NWSPDQKAWLCFIKFELRYNEIERARSIY---ERFVLCHP 210
Query: 369 HV--YVAYATMAFCLDKDAKVAQSVFEAGLKRFMH-EPGYIL--EYADFLCRLNDDRNVR 423
V ++ YA K+A+ V+E + + + E IL +A+F R + R
Sbjct: 211 KVSAFIRYAKFEMKRGGQVKLAREVYERAVDKLANDEEAEILFVSFAEFEERCKEVERAR 270
Query: 424 ALFERALSLLPPEESIEVWKRFAQFEQTYGD 454
+++ AL + + E++K+F FE+ YGD
Sbjct: 271 FIYKFALDHIRKGRAEELYKKFVAFEKQYGD 301
>AT4G24270.2 | chr4:12581765-12587293 REVERSE LENGTH=818
Length = 817
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 190/475 (40%), Gaps = 72/475 (15%)
Query: 29 EKLLSTFPTAAKYWKQYVEAYMSAKDDEATKQI---FSRCLLSCLQINLWRCYINFIRRV 85
E + + FP + W ++ S E +I + R L ++LW Y++F+
Sbjct: 90 EAMSAIFPLSPSLWLEWARDEASLAASENVPEIVMLYERGLSDYQSVSLWCDYLSFMLEF 149
Query: 86 NDK-RG--SDGLEETKKAFDFMLNYVGNDVASGP-VWMDYIAF----LKSMPVVTPQEES 137
+ RG S+G+ + + F+ + G V G +W Y F L ++ +E +
Sbjct: 150 DPSVRGYPSEGISKMRSLFERAIPAAGFHVTEGNRIWEGYREFEQGVLATIDEADIEERN 209
Query: 138 HRMTTVRKVYQKAILVPTNHVEQLWKDYENF--ENSVSRTLAKGLLSEYQPKF----NSA 191
++ +R ++ + + VP ++ Y+ + E + + LS+ + A
Sbjct: 210 KQIQRIRSIFHRHLSVPLENLSSTLIAYKTWELEQGIDLDIGSDDLSKVSHQVAVANKKA 269
Query: 192 KAVYRERKKYIDDIDWNMLAVPPTGSYKEEQQCMAWKRLLAFEK--GNPQRIDATTANRR 249
+ +Y ER ++I L+ + ++ + + FEK G+P R+ A
Sbjct: 270 QQMYSERAHLEENISKQDLS--------DTEKFQEFMNYIKFEKTSGDPTRVQA------ 315
Query: 250 VTFTFEQCLMYLYHHPDIWYDYAMWHAKNGSVDSAI-KIFQRAVKALPDSGVLKYAFAEL 308
+E+ + D+W DY ++ K V AI + RA ++ P +G L +A L
Sbjct: 316 ---IYERAVAEYPVSSDLWIDYTVYLDKTLKVGKAITHAYSRATRSCPWTGDL-WARYLL 371
Query: 309 EESRGAIQPAKAIYESLIAENAGMTSLAHIQ--FIRFLRRTEGIEAARKYFLDARKLPGC 366
RG+ K IY+ + E + + + + +L R +G+ R+ L R L
Sbjct: 372 ALERGSASE-KEIYD--VFEKSLQCTFSSFEEYLDLYLTRVDGL---RRRMLSTRMLEAL 425
Query: 367 TY-------------------------HVYVAYATMAFCLDKDAKVAQSVFEAGLKRFMH 401
Y H++ +A + + KD A+ V+++ LK+
Sbjct: 426 DYSLIRETFQQASDYLTPHMQNTDSLLHLHTYWANLELNIGKDLAGARGVWDSFLKKSGG 485
Query: 402 EPGYILEYADFLCRLNDDRNVRALFERALSL-LPPEESIEVWKRFAQFEQTYGDL 455
Y D L + R+++ R + S ++ K + +FE+ +GDL
Sbjct: 486 MLAAWHAYIDMEVHLGHIKEARSIYRRCYTRKFDGTGSEDICKGWLRFEREHGDL 540
>AT3G51110.1 | chr3:18983711-18984952 FORWARD LENGTH=414
Length = 413
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 262 YHHPDIWYDYAMWHAKNGSVDSAIKIFQRAVKALPDSGVLKYAFAELEESRGAIQPAKAI 321
Y + +W YA + +N SV+ A ++ RAVK LP Y + +EE G I A+ I
Sbjct: 103 YRNHTLWLKYAEFEMRNKSVNHARNVWDRAVKILPRVDQFWYKYIHMEEILGNIDGARKI 162
Query: 322 YESLIAENAGMTSLAHIQFIRFLRRTEGIEAARKYFLDARKLPGC--TYHVYVAYATMAF 379
+E + + A + FI+F R IE +R + + C ++ YA
Sbjct: 163 FERWM--DWSPDQQAWLCFIKFELRYNEIERSRSIY---ERFVLCHPKASSFIRYAKFEM 217
Query: 380 CLDKDAKVAQSVFEAG---LKRFMHEPGYI-LEYADF--LCRLNDDRNVRALFERALSLL 433
+ +A+ V+E LK E I + +A+F LC+ + R L++ AL +
Sbjct: 218 -KNSQVSLARIVYERAIEMLKDVEEEAEMIFVAFAEFEELCK--EVERARFLYKYALDHI 274
Query: 434 PPEESIEVWKRFAQFEQTYGD 454
P + +++K+F FE+ YG+
Sbjct: 275 PKGRAEDLYKKFVAFEKQYGN 295
>AT3G13210.1 | chr3:4244921-4247697 FORWARD LENGTH=658
Length = 657
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 78/190 (41%), Gaps = 15/190 (7%)
Query: 267 IWYDYAMWHAKNGSVDSAIKIFQRAVKALPDSGVLKYAFAELEESRGAIQPAKAIYESLI 326
+W YA + KN SV+ A ++ RAV LP L Y F +EE G I A+ I E I
Sbjct: 93 VWVKYADFEMKNKSVNEARNVWDRAVSLLPRVDQLWYKFIHMEEKLGNIAGARQILERWI 152
Query: 327 AENAGMTSLAHIQFIRFLRRTEGIEAARKYFLDARKLPGCTYHV--YVAYATMAFCLDKD 384
+ A + FI+F + IE AR + + C V Y+ YA
Sbjct: 153 --HCSPDQQAWLCFIKFELKYNEIECARSIY---ERFVLCHPKVSAYIRYAKFEM-KHGQ 206
Query: 385 AKVAQSVFEAGLKRFMHEPGYILEYADFLCRLNDDRNVRALFERALSLLPPEESIEVWKR 444
++A VFE K + + + F ++ AL +P + ++ +
Sbjct: 207 VELAMKVFERAKKELADDEEAEILFVAFA-------EFEEQYKFALDQIPKGRAENLYSK 259
Query: 445 FAQFEQTYGD 454
F FE+ GD
Sbjct: 260 FVAFEKQNGD 269
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,370,322
Number of extensions: 656344
Number of successful extensions: 2017
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1984
Number of HSP's successfully gapped: 9
Length of query: 731
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 625
Effective length of database: 8,200,473
Effective search space: 5125295625
Effective search space used: 5125295625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)