BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0569500 Os12g0569500|AK066624
(233 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250 109 1e-24
AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317 82 3e-16
AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254 81 4e-16
AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346 78 4e-15
AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666 77 7e-15
AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331 76 1e-14
AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302 75 4e-14
AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282 74 5e-14
AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247 72 4e-13
AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421 71 5e-13
AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240 70 8e-13
AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257 70 9e-13
AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265 69 2e-12
AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357 65 2e-11
AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245 63 1e-10
AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245 62 2e-10
AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247 61 5e-10
AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261 58 3e-09
AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248 58 5e-09
AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209 51 5e-07
AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800 49 2e-06
>AT2G28790.1 | chr2:12354664-12355413 REVERSE LENGTH=250
Length = 249
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 103/231 (44%), Gaps = 57/231 (24%)
Query: 32 MLTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGL-----RSLNLPAGFWSGRVVPR 86
LT+ N CP+TVWP + P++G P + G G L RS N+P WSGR+ R
Sbjct: 28 FLTVVNNCPFTVWPAIQPNAGHPVLEKG------GFALPTFTHRSFNVPTTHWSGRIWAR 81
Query: 87 TWCRD------------GGRCD---TGNAPPATVVRLSFN--GAGGLAEYSVNLGEGFNV 129
TWC G R + G APPA++ + + G + Y V+L +G+NV
Sbjct: 82 TWCAHYNGKFSCLTGDCGNRLECNGLGGAPPASLAQFDLHHGGHHDFSSYGVSLVDGYNV 141
Query: 130 PTVVSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACR-------------- 175
P V+PH G G+CP +GC DL C A +V G VVAC+
Sbjct: 142 PMTVTPHE-GHGVCPVVGCREDLIKTCPAHLQVRSHS--GHVVACKSGCEAFHTDELCCR 198
Query: 176 ------------GPASYFKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFCQ 214
+ +FK CP + T D + C SP E+K++FC
Sbjct: 199 GHYNSPNTCKASSHSLFFKHACPSSFTFAHDSPSLMHDCASPRELKVIFCH 249
>AT1G20030.2 | chr1:6945725-6947017 FORWARD LENGTH=317
Length = 316
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPI--ADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCR 90
T N C YTVWP + ++G P+ + L+G R++N P+ W GR RT C
Sbjct: 22 FTFSNKCDYTVWPGILSNAGVSPLPTTGFVLLKGE---TRTINAPSS-WGGRFWGRTLCS 77
Query: 91 ---DG------GRCDTGN--------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVV 133
DG G C +G APPAT+ + +G+GGL Y V+L +G+NV +V
Sbjct: 78 TDSDGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLDGSGGLDFYDVSLVDGYNVQMLV 137
Query: 134 SPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDV-VACRGPASYFKQ 183
P G C + GC DLN C + RV D V +AC+ F+Q
Sbjct: 138 VPQGGSGQNCSSTGCVVDLNGSCPSELRVNSVDGKEAVAMACKSACEAFRQ 188
>AT2G17860.1 | chr2:7762257-7763018 REVERSE LENGTH=254
Length = 253
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPI-ADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRD 91
T+ N C YTVWP + +G+ P+ G L R +++PA WSGR+ RT C
Sbjct: 25 FTIVNQCNYTVWPGLLSGAGTAPLPTTGFSL--NSFESRLISIPAA-WSGRIWGRTLCNQ 81
Query: 92 G----------GRCDT--------GNAPPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVV 133
G C + G PPAT+ + NGA L Y V+L +G+N+P +
Sbjct: 82 NEITGIFTCVTGDCGSSQIECSGAGAIPPATLAEFTLNGAENLDFYDVSLVDGYNIPMTI 141
Query: 134 SPH--AIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYF 181
P+ AIG G C A GC ADLN C +V G VAC+ F
Sbjct: 142 VPYGGAIGVGKCNATGCAADLNGLCPEQLKVTVEAAGTGAVACKSACEAF 191
>AT4G38660.1 | chr4:18066448-18067984 REVERSE LENGTH=346
Length = 345
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 75/152 (49%), Gaps = 23/152 (15%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIAD-GIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCR- 90
T N C YTVWP + ++GSP ++ G L +G RSL P G WSGR RT C+
Sbjct: 32 FTFANRCGYTVWPGILSNAGSPTLSTTGFELP-KGTS-RSLQAPTG-WSGRFWARTGCKF 88
Query: 91 ---DGGRCDTGN-------------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVS 134
G C TG+ APP T+ + G GG Y V+L +G+N+P +V
Sbjct: 89 DSSGSGTCKTGDCGSNAVECAGLGAAPPVTLAEFTL-GTGGDDFYDVSLVDGYNIPMIVE 147
Query: 135 PHAIGGGMCPALGCTADLNAGCAAGQRVYGGD 166
A G G C + GCT DLN C A R GD
Sbjct: 148 -VAGGSGQCASTGCTTDLNIQCPAELRFGDGD 178
>AT5G38280.1 | chr5:15293325-15295838 REVERSE LENGTH=666
Length = 665
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 88/230 (38%), Gaps = 56/230 (24%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGL-----RSLNLPAGFWSGRVVPRT 87
T+ N C YTVWP G + + L G L R +N+P WSGR+ R+
Sbjct: 27 FTIENKCDYTVWP------GFLTMTTAVSLPTNGFSLKKGESRVINVPPS-WSGRLWGRS 79
Query: 88 WCRDG---------GRC--------DTGNAPPATVVRLSFNGAGGLAEYSVNLGEGFNVP 130
+C G C D+G PP T++ + + G Y V++ +G+N+P
Sbjct: 80 FCSTSSTGNFSCATGDCGSGKIECSDSGARPPTTLIDFTLDATDGQDFYDVSVVDGYNLP 139
Query: 131 TVVSPHAIGGG-MCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRG------------- 176
VV P +G G C +GC +LN C + +V G +AC
Sbjct: 140 LVVVPQRLGSGRTCSNVGCVVNLNKTCPSELKVMGSSNKEHPIACMNACQKFGLPEFCCY 199
Query: 177 ----------PASY---FKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFC 213
P Y FK CPL + D E C + + FC
Sbjct: 200 GEYGKPAKCQPTLYSTNFKNECPLAYSYAYDNENNTFRCSNSPNYVITFC 249
>AT1G75800.1 | chr1:28458889-28460447 FORWARD LENGTH=331
Length = 330
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCR-- 90
M N C YTVWP + ++G PP+ + +G R+++ P W GR RT C
Sbjct: 25 FIMVNKCEYTVWPGLLSNAGVPPLPTTGFVLQKGEE-RTISAPTS-WGGRFWGRTQCSTD 82
Query: 91 -DG------GRCDTGN--------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSP 135
DG G C +G PPAT+ + +G+ GL Y V+L +G+NVP +V+P
Sbjct: 83 TDGKFTCLTGDCGSGTLECSGSGATPPATLAEFTLDGSNGLDFYDVSLVDGYNVPMLVAP 142
Query: 136 HAIGGGMCPALGCTADLNAGCAAGQRVYGGD-TGGDVVACRGPASYFK 182
G C + GC DLN C + +V D G + C+ F+
Sbjct: 143 QGGSGLNCSSTGCVVDLNGSCPSELKVTSLDGRGKQSMGCKSACEAFR 190
>AT4G36010.1 | chr4:17039472-17040976 REVERSE LENGTH=302
Length = 301
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 80/173 (46%), Gaps = 29/173 (16%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPI-ADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRD 91
T+ N C YTVWP + +G+ P+ G L R + +PA WSGR+ RT C
Sbjct: 25 FTIVNQCSYTVWPGLLSGAGTSPLPTTGFSLNPTET--RVIPIPAA-WSGRIWGRTLCTQ 81
Query: 92 G---GR--CDTGN-------------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVV 133
GR C TG+ APPAT+ + NGA GL Y V+L +G+N+P +
Sbjct: 82 DATTGRFTCITGDCGSSTVECSGSGAAPPATLAEFTLNGANGLDFYDVSLVDGYNIPMTI 141
Query: 134 SPHAIGGGM-----CPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYF 181
P G C GC A+LN C A +V TG + VAC+ F
Sbjct: 142 VPQGGGDAGGVAGNCTTTGCVAELNGPCPAQLKV--ATTGAEGVACKSACEAF 192
>AT4G38670.1 | chr4:18069856-18071227 REVERSE LENGTH=282
Length = 281
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 49/226 (21%)
Query: 33 LTMHNLCPYTVWP-IVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWC-- 89
+ N C T+WP ++S + +P G RL RG +++ +P WSGR+ RT C
Sbjct: 25 FKITNRCRNTIWPGLLSGANSAPLPTTGFRLS-RGKS-KTVAIPES-WSGRLWARTLCSQ 81
Query: 90 -RDGGR--CDTGN-------------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVV 133
R G C TG+ PPAT+ + NG GGL Y V+L +G+N+P ++
Sbjct: 82 DRSSGSFVCLTGDCGSGKVECSGSGAKPPATLAEFTLNGTGGLDFYDVSLVDGYNLPMLI 141
Query: 134 SPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRG----------------- 176
P I G C A GC DLN C ++ G+ VACR
Sbjct: 142 LPKKIVIGGCGATGCLVDLNGACPRDLKLV-TRGNGNGVACRSACEAFGDPRYCCSDAYA 200
Query: 177 ------PASY---FKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFC 213
P+ Y FK CP + D + C + + ++FC
Sbjct: 201 TPDTCQPSVYSLFFKHACPRAYSYAYDDKTSTYTCATGADYFIIFC 246
>AT1G75050.1 | chr1:28180116-28181062 FORWARD LENGTH=247
Length = 246
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 89/200 (44%), Gaps = 27/200 (13%)
Query: 32 MLTMHNLCPYTVWP-IVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCR 90
+ T+ N CPYTVWP I+S + + + DG G ++ L PAG WSGR RT C
Sbjct: 26 VFTLQNSCPYTVWPGILSGNDNT--LGDGGFPLTPGASVQ-LTAPAG-WSGRFWARTGCN 81
Query: 91 ------------DGG---RCDTGNAPPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSP 135
D G +C+ G PP T+ + G GG Y V+L +G+NV + P
Sbjct: 82 FDASGHGNCGTGDCGGVLKCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVEMGIKP 141
Query: 136 HAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQRCPLTRTGGGDV 195
G G C GC AD+NA C R+ T G + AC+ + F TG
Sbjct: 142 QG-GSGDCHYAGCVADVNAVCPNELRLMDPHT-GIIAACKSACAAFNSE-EFCCTG---A 195
Query: 196 EPVPQHCISPGEIKLVFCQA 215
PQ C SP +F A
Sbjct: 196 HATPQTC-SPTHYSAMFKSA 214
>AT5G24620.1 | chr5:8430918-8432289 FORWARD LENGTH=421
Length = 420
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 85/173 (49%), Gaps = 30/173 (17%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPI-ADGIRLEGRGVGLRSLNLPAGF-WSGRVVPRTWCR 90
+ N CP+T+WP SG+ P+ G RL+ VG +S+ +P WSGR+ RT C
Sbjct: 27 FVITNNCPFTIWPGTLAGSGTQPLPTTGFRLD---VG-QSVRIPTALGWSGRIWARTGCN 82
Query: 91 ----DGGRCDTGN------------APPATVVRLSF-NGAGGLAEYSVNLGEGFNVPTVV 133
G+C TG+ APP ++ ++ +G+ Y V+L +G+N+P V
Sbjct: 83 FDANGAGKCMTGDCGGKLECAGNGAAPPTSLFEITLGHGSDDKDFYDVSLVDGYNLPIVA 142
Query: 134 SPHAIGGGM---CPALGCTADLNAGCAAGQRVYGGDTG--GDVVACRGPASYF 181
P GGG+ C A GC AD+N C +V G + G VVAC+ F
Sbjct: 143 LP--TGGGLVGACNATGCVADINISCPKELQVMGEEEAERGGVVACKSACEAF 193
>AT1G75040.1 | chr1:28177754-28178731 FORWARD LENGTH=240
Length = 239
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCR-- 90
T+ N CP TVW G P + DG E R L PAG WSGR RT C
Sbjct: 26 FTLRNNCPTTVWAGTLAGQG-PKLGDG-GFELTPGASRQLTAPAG-WSGRFWARTGCNFD 82
Query: 91 ------------DGGRCDTGNAPPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSPHAI 138
G RC+ G PP T+ + G GG Y V+L +G+NV + P
Sbjct: 83 ASGNGRCVTGDCGGLRCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSG- 141
Query: 139 GGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYFK 182
G G C GC +DLNA C +V + +VVAC+ F
Sbjct: 142 GSGDCKYAGCVSDLNAACPDMLKVMDQN---NVVACKSACERFN 182
>AT5G40020.1 | chr5:16022896-16024294 REVERSE LENGTH=257
Length = 256
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 22/161 (13%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWC--- 89
+ N C + +WP V+P+SG P +A G G G++ ++ P G WSGR+ RT C
Sbjct: 30 FYVQNKCSFPIWPAVAPNSGHPVLASGGFYLPCG-GIKRIDAPLG-WSGRIWARTGCDFT 87
Query: 90 -RDGGRCDTGN------------APPATVVRLSFNGAGGLAE-YSVNLGEGFNVPTVVSP 135
C+TG+ PPAT+++++ Y V+L +G+N+P VV+
Sbjct: 88 SNSKQACETGDCDGHLECNGLIGKPPATLIQIAVQADKSKPNFYDVSLVDGYNLPVVVNS 147
Query: 136 HAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRG 176
+ C LGC DL C +V + G VVAC+
Sbjct: 148 KPVSSK-CTILGCHKDLKTTCPEELQVLNEE--GRVVACKS 185
>AT1G73620.1 | chr1:27681432-27682954 FORWARD LENGTH=265
Length = 264
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 77/168 (45%), Gaps = 24/168 (14%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIA-DGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWC-- 89
+ +N C YTVWP + P SG +A G +L +L LP WSGR R C
Sbjct: 44 VIFYNKCTYTVWPGIQPSSGQSLLAGGGFKLSPNRA--YTLQLPP-LWSGRFWGRHGCSF 100
Query: 90 -RDG-GRCDTGN------------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSP 135
R G GRC TG+ PPAT+ ++ + Y V+L +G+N+ + P
Sbjct: 101 DRSGRGRCATGDCGGSFLCNGAGGVPPATLAEITL--GHDMDFYDVSLVDGYNLAMSIMP 158
Query: 136 HAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQ 183
G G C GC +DLN C G +V D G VVAC+ S F
Sbjct: 159 -VKGTGKCTYAGCVSDLNRMCPVGLQVRSRD-GTQVVACKSACSAFNS 204
>AT1G77700.1 | chr1:29204747-29206217 FORWARD LENGTH=357
Length = 356
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 90/233 (38%), Gaps = 64/233 (27%)
Query: 32 MLTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLR-----SLNLPAGFWSGRVVPR 86
+ T+ N C T+WP ++P G G G L+ + P G WSGR+ R
Sbjct: 90 VFTIINSCDQTIWPAITP---------GENFNGGGFELKPGQSIVFHAPVG-WSGRIWGR 139
Query: 87 TWCRDG----GRCDTGN-----------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPT 131
T C+ G C+TG+ PPA++ + L Y V+L +GFN+P
Sbjct: 140 TGCKFDSTGTGTCETGSCGSTLKCSASGKPPASLAEFTL---AALDFYDVSLVDGFNLPM 196
Query: 132 VVSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRG--------------- 176
V+P G G C GC ADL C V + G V++CR
Sbjct: 197 SVTPMN-GKGNCSVAGCVADLRPHCPQELAV---KSNGKVISCRSACDVFDRDEYCCRGV 252
Query: 177 --------PASY---FKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFCQAAMV 218
P Y FKQ CP + D +P + + + FC + V
Sbjct: 253 YGNPVVCQPTYYSKIFKQACPTAYSYAYD-DPTSIMTCTASDYVISFCSSRFV 304
>AT1G18250.2 | chr1:6277024-6278005 REVERSE LENGTH=245
Length = 244
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADG-IRLEGRGVGLRSLNLPAGFWSGRVVPRTWC-- 89
+ +N C + VWP + P +G +A G +L SL LP WSGR R C
Sbjct: 24 VIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKA--HSLQLPP-LWSGRFWGRHGCTF 80
Query: 90 -RDG-GRCDTGNAPPATVVRLSFNGAGG-----LAE---------YSVNLGEGFNVPTVV 133
R G G C TG+ + LS NGAGG LAE Y V+L +G+N+ +
Sbjct: 81 DRSGRGHCATGDCGGS----LSCNGAGGEPPATLAEITLGPELDFYDVSLVDGYNLAMSI 136
Query: 134 SPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQ 183
P G G C GC +DLN C G +V + G VVAC+ S F
Sbjct: 137 MP-VKGSGQCSYAGCVSDLNQMCPVGLQVRSRN-GKRVVACKSACSAFNS 184
>AT4G11650.1 | chr4:7025127-7026113 REVERSE LENGTH=245
Length = 244
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 83/211 (39%), Gaps = 43/211 (20%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRDG 92
+ N C YTVW SP G RL+ G R L++ AG R+ RT C
Sbjct: 25 FEILNQCSYTVWAAASPGGGR-------RLDA-GQSWR-LDVAAGTKMARIWGRTNCNFD 75
Query: 93 ----GRCDTGN-----------APPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSPHA 137
GRC TG+ PP T+ + N L Y ++L +GFN+P SP +
Sbjct: 76 SSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTS 135
Query: 138 IGGGMCPALGCTADLNAGCAAGQRVYGG---------------DTGGDVVACRGPASYFK 182
C + CTAD+N C R GG G + + +FK
Sbjct: 136 ---SNCHRILCTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFK 192
Query: 183 QRCPLTRTGGGDVEPVPQHCISPGEIKLVFC 213
QRCP + D +P + ++VFC
Sbjct: 193 QRCPDAYSYPQD-DPTSTFTCTNTNYRVVFC 222
>AT1G75030.1 | chr1:28174418-28175255 FORWARD LENGTH=247
Length = 246
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 75/174 (43%), Gaps = 33/174 (18%)
Query: 32 MLTMHNLCPYTVWP------IVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVP 85
+ T+ N C YTVWP ++ G P+ G ++ L P G WSGR
Sbjct: 25 VFTLQNSCAYTVWPGTLSGNSITLGDGGFPLTPGASVQ--------LTAPTG-WSGRFWA 75
Query: 86 RTWCR------------DGG---RCDTGNAPPATVVRLSFNGA-GGLAEYSVNLGEGFNV 129
RT C D G +C G PPAT+ + + G+ Y V+L +G+NV
Sbjct: 76 RTGCNFDASGHGTCVTGDCGGVLKCTGGGVPPATLAEFTVGSSNAGMDFYDVSLVDGYNV 135
Query: 130 PTVVSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQ 183
+ P G G C GC +D+N C + R+ ++ G V AC+ + F
Sbjct: 136 KMGIKPQG-GFGNCKYAGCVSDINEICPSELRIMDPNS-GSVAACKSACAAFSS 187
>AT4G24180.1 | chr4:12550356-12551221 REVERSE LENGTH=261
Length = 260
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 82/224 (36%), Gaps = 46/224 (20%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRDG 92
+T+ N C +TVWP + +SGS I E G RS PA WSGR RT C
Sbjct: 35 ITIVNRCSFTVWPGILSNSGSGDIGT-TGFELVPGGSRSFQAPAS-WSGRFWARTGCNFN 92
Query: 93 -----GRCDTGN-------------APPATVVRLSFNG-----AGGLAEYSVNLGEGFNV 129
G C TG+ PPAT+ + A Y V+L +G+NV
Sbjct: 93 SDTGQGTCLTGDCGSNQVECNGAGAKPPATLAEFTIGSGPADPARKQDFYDVSLVDGYNV 152
Query: 130 PTVVSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDT--------GGDVVACRG----- 176
P +V G C GC DLN C R G G C G
Sbjct: 153 PMLVEASGGSEGTCLTTGCVTDLNQKCPTELRFGSGSACKSACEAFGSPEYCCSGAYASP 212
Query: 177 ----PASY---FKQRCPLTRTGGGDVEPVPQHCISPGEIKLVFC 213
P+ Y FK CP + + D C + + + FC
Sbjct: 213 TECKPSMYSEIFKSACPRSYSYAFDDATSTFTC-TDADYTITFC 255
>AT1G19320.1 | chr1:6679327-6680178 FORWARD LENGTH=248
Length = 247
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCR-- 90
T+ N C T+WP + +G+ + DG G + P WSGR RT+C
Sbjct: 28 FTLTNHCGSTIWPGILTANGAQ-LGDGGFALASGSSVTFTVSPG--WSGRFWARTYCNFD 84
Query: 91 --DGGRCDTGN------------APPATVVRLSFNGAGGLAE----YSVNLGEGFNVPTV 132
G+C TG+ APPAT+ + +G Y V+L +G+NV
Sbjct: 85 ASGSGKCGTGDCGSKLKCAGAGGAPPATLAEFTIGSSGKKNAVQDFYDVSLVDGYNVQMK 144
Query: 133 VSPHAIGGGMCPALGCTADLNAGCAAGQRVYGGDTGGDVVACRGPASYFKQ 183
++P G G C GC +D+NA C +V G V AC+ F +
Sbjct: 145 ITPQG-GSGDCKTAGCVSDVNAICPKELQVTGPS---GVAACKSACEAFNK 191
>AT4G36000.1 | chr4:17037583-17038297 REVERSE LENGTH=209
Length = 208
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 97 TGNAPPATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSPHAIGGGMCPALGCTADLNAGC 156
+G PPAT+ + +G L Y V+L +G+N+P +V G G+CP GC DLN C
Sbjct: 6 SGAEPPATLAEFTLGISGSLDFYDVSLVDGYNLPMIVE----GSGLCPTTGCVTDLNQNC 61
>AT1G70250.1 | chr1:26452975-26456088 FORWARD LENGTH=800
Length = 799
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 24/142 (16%)
Query: 33 LTMHNLCPYTVWPIVSPDSGSPPIADGIRLEGRGVGLRSLNLPAGFWSGRVVPRTWCRD- 91
T+ N C YT+WP S + +G R++ P+ W GR RT C
Sbjct: 147 FTIENKCQYTIWPATYGYRRSLETTGFVLEKGE---TRTIKAPSS-WIGRFWGRTLCSTN 202
Query: 92 ---GGRCDTGNAP------------PATVVRLSFNGAGGLAEYSVNLGEGFNVPTVVSPH 136
G C TG+ P TVV + + G+ Y VN+ G+N+P +V+P
Sbjct: 203 STGGFSCATGDCTSGKIKCLGIPIDPTTVVEFNL-ASYGVDYYVVNVFNGYNLPLLVTPE 261
Query: 137 AIGGGMCPALGCTADLNAGCAA 158
C ++ C D+N C +
Sbjct: 262 ---NKNCRSIECVIDMNETCPS 280
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.140 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,322,436
Number of extensions: 257291
Number of successful extensions: 516
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 474
Number of HSP's successfully gapped: 22
Length of query: 233
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 138
Effective length of database: 8,502,049
Effective search space: 1173282762
Effective search space used: 1173282762
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)