BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0566300 Os12g0566300|AK071114
         (423 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G09430.1  | chr1:3042135-3044978 FORWARD LENGTH=425            773   0.0  
AT1G10670.3  | chr1:3535787-3538098 FORWARD LENGTH=444            709   0.0  
AT1G60810.1  | chr1:22388691-22390993 REVERSE LENGTH=424          709   0.0  

>AT1G09430.1 | chr1:3042135-3044978 FORWARD LENGTH=425
          Length = 424

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/420 (87%), Positives = 395/420 (94%)

Query: 1   MARKKIREYDSKRLLREHLKRLAAIDLHILSAQVTESTDFTELVNQEPWLSSMKLVVKPD 60
           MARKKIREYDSKRLL+EHLKRLA IDL I SAQVTESTDFTEL NQE WLSS KLVVKPD
Sbjct: 1   MARKKIREYDSKRLLKEHLKRLANIDLQIRSAQVTESTDFTELTNQESWLSSTKLVVKPD 60

Query: 61  MLFGKRGKSGLVALNLDLAQVRQFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
           MLFGKRGKSGLVAL LDLA+V  FVK RLG EVEM GCKAPITTFIVEPFVPHDQEYYLS
Sbjct: 61  MLFGKRGKSGLVALKLDLAEVADFVKARLGTEVEMEGCKAPITTFIVEPFVPHDQEYYLS 120

Query: 121 IVSERLGSTISFSECGGIEIEENWDKVKTVFLPTEKAMTPDACAPLIATLPLEVRTKIGD 180
           IVS+RLG TISFSECGGIEIEENWDKVKT+FLP EK+MT + CAPLIATLPLEVR KIG+
Sbjct: 121 IVSDRLGCTISFSECGGIEIEENWDKVKTIFLPAEKSMTLEVCAPLIATLPLEVRAKIGN 180

Query: 181 FIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGELDDTAAFKNFKKWGNIQFPLPFG 240
           FI G ++VFQDLDFSF+EMNPFT+V+GEP+PLDMRGELDDTAAFKNF KWG+I+FPLPFG
Sbjct: 181 FIMGAFAVFQDLDFSFMEMNPFTLVDGEPFPLDMRGELDDTAAFKNFNKWGDIEFPLPFG 240

Query: 241 RVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
           RVLS +E+FIH LDEKTS+SLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVLSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300

Query: 301 YAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALRE 360
           YAEYSGAPNEEEVLQYARVV+DCAT DPDGRKRALLIGGGIANFTDVAATF+GIIRALRE
Sbjct: 301 YAEYSGAPNEEEVLQYARVVIDCATTDPDGRKRALLIGGGIANFTDVAATFNGIIRALRE 360

Query: 361 KESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGVPIEVYGPEATMTGICKQAIDCIM 420
           KE++LKA+RM+IYVRRGGPNYQTGLA+MR LG ELGVP+EVYGPEATMTGICK+AIDCIM
Sbjct: 361 KETRLKASRMHIYVRRGGPNYQTGLARMRALGEELGVPLEVYGPEATMTGICKRAIDCIM 420



>AT1G10670.3 | chr1:3535787-3538098 FORWARD LENGTH=444
          Length = 443

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/443 (76%), Positives = 386/443 (87%), Gaps = 20/443 (4%)

Query: 1   MARKKIREYDSKRLLREHLKRLAAIDLHILSAQ--------------------VTESTDF 40
           MARKKIREYDSKRL++EH KRL+  +L I S Q                    + E+TD 
Sbjct: 1   MARKKIREYDSKRLVKEHFKRLSGKELPIRSVQADDVFWLHSCFGFSDIRHHVINETTDL 60

Query: 41  TELVNQEPWLSSMKLVVKPDMLFGKRGKSGLVALNLDLAQVRQFVKERLGVEVEMGGCKA 100
            ELV +EPWLSS KLVVKPDMLFGKRGKSGLVAL LD A V  FVKERLG EVEM GCK 
Sbjct: 61  NELVEKEPWLSSEKLVVKPDMLFGKRGKSGLVALKLDFADVATFVKERLGKEVEMSGCKG 120

Query: 101 PITTFIVEPFVPHDQEYYLSIVSERLGSTISFSECGGIEIEENWDKVKTVFLPTEKAMTP 160
           PITTFIVEPFVPH++EYYL++VS+RLG +ISFSECGGIEIEENWDKVKT+FLPT  ++TP
Sbjct: 121 PITTFIVEPFVPHNEEYYLNVVSDRLGCSISFSECGGIEIEENWDKVKTIFLPTGASLTP 180

Query: 161 DACAPLIATLPLEVRTKIGDFIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGELDD 220
           + CAPL+ATLPLE++ +I +FI+ ++++FQDLDF+FLEMNPFT+V+G PYPLDMRGELDD
Sbjct: 181 EICAPLVATLPLEIKAEIEEFIKVIFTLFQDLDFTFLEMNPFTLVDGSPYPLDMRGELDD 240

Query: 221 TAAFKNFKKWGNIQFPLPFGRVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGG 280
           TAAFKNFKKWG+I+FPLPFGRV+SP+ESFIH LDEKTS+SLKFTVLNPKGRIWTMVAGGG
Sbjct: 241 TAAFKNFKKWGDIEFPLPFGRVMSPTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGG 300

Query: 281 ASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGG 340
           ASVIYADTVGDLGYASELGNYAEYSGAP E+EVLQYARVV+DCATA+PDG+ RAL+IGGG
Sbjct: 301 ASVIYADTVGDLGYASELGNYAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGG 360

Query: 341 IANFTDVAATFSGIIRALREKESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGVPIE 400
           IANFTDVAATF+GIIRAL+EKE+KLKAARM+I+VRRGGPNYQ GLAKMR LG ++GVPIE
Sbjct: 361 IANFTDVAATFNGIIRALKEKEAKLKAARMHIFVRRGGPNYQKGLAKMRALGDDIGVPIE 420

Query: 401 VYGPEATMTGICKQAIDCIMAEA 423
           VYGPEATMTGICK+AI  I A A
Sbjct: 421 VYGPEATMTGICKEAIQYITAAA 443



>AT1G60810.1 | chr1:22388691-22390993 REVERSE LENGTH=424
          Length = 423

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/423 (78%), Positives = 385/423 (91%)

Query: 1   MARKKIREYDSKRLLREHLKRLAAIDLHILSAQVTESTDFTELVNQEPWLSSMKLVVKPD 60
           MARKKIREYDSKRL++EH KRL+  +L I S Q+ + TD  ELV +EPWLSS KLVVKPD
Sbjct: 1   MARKKIREYDSKRLVKEHFKRLSGQELPIRSVQINQETDLNELVEREPWLSSEKLVVKPD 60

Query: 61  MLFGKRGKSGLVALNLDLAQVRQFVKERLGVEVEMGGCKAPITTFIVEPFVPHDQEYYLS 120
           MLFGKRGKSGLVALNLD A V  FVKERLG EVEM GCK PITTFIVEPFVPH++E+YL+
Sbjct: 61  MLFGKRGKSGLVALNLDFADVATFVKERLGKEVEMSGCKGPITTFIVEPFVPHNEEFYLN 120

Query: 121 IVSERLGSTISFSECGGIEIEENWDKVKTVFLPTEKAMTPDACAPLIATLPLEVRTKIGD 180
           IVS+RLG +ISFSECGGI+IEENWDKVKT+ +PT  ++T + CAPL+ATLPLE++ ++ D
Sbjct: 121 IVSDRLGCSISFSECGGIDIEENWDKVKTITIPTGASLTFEICAPLVATLPLEIKGELED 180

Query: 181 FIRGVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGELDDTAAFKNFKKWGNIQFPLPFG 240
           FI+ ++++F+DLDF+FLEMNPFT+V+G+PYPLDMRGELDDTAAFKNFKKWG+I+FP+PFG
Sbjct: 181 FIQVIFTLFEDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGDIEFPMPFG 240

Query: 241 RVLSPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300
           RV+S +ESFIH LDEKTS+SLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN
Sbjct: 241 RVMSSTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 300

Query: 301 YAEYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALRE 360
           YAEYSGAP E+EVLQYARVV+DCATA+PDG+ RAL+IGGGIANFTDVAATF+GIIRAL+E
Sbjct: 301 YAEYSGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKE 360

Query: 361 KESKLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGVPIEVYGPEATMTGICKQAIDCIM 420
           KE+KLKAARM+I+VRRGGPNYQ GLAKMR+LG E+GVPIEVYGPEATMTGICK+AI  I 
Sbjct: 361 KEAKLKAARMHIFVRRGGPNYQKGLAKMRSLGDEIGVPIEVYGPEATMTGICKEAIQYIT 420

Query: 421 AEA 423
           A A
Sbjct: 421 AAA 423



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,162,980
Number of extensions: 395964
Number of successful extensions: 830
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 827
Number of HSP's successfully gapped: 3
Length of query: 423
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 322
Effective length of database: 8,337,553
Effective search space: 2684692066
Effective search space used: 2684692066
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)