BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0565300 Os12g0565300|AK073968
(726 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G43040.1 | chr2:17896049-17898524 REVERSE LENGTH=705 847 0.0
AT4G28600.1 | chr4:14130046-14132599 FORWARD LENGTH=740 509 e-144
AT1G27460.1 | chr1:9534977-9537424 FORWARD LENGTH=695 488 e-138
>AT2G43040.1 | chr2:17896049-17898524 REVERSE LENGTH=705
Length = 704
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/669 (63%), Positives = 524/669 (78%), Gaps = 4/669 (0%)
Query: 61 RVDDGNIQEAESSLREGLSLNYEEARALLGRLEYQRGNVEAALRVFDGIDLQAAIQRFQP 120
++D+GNIQEAESSLREGLSLN+EEARALLGRLEYQRGN+E ALRVF+GIDLQAAIQR Q
Sbjct: 36 KLDEGNIQEAESSLREGLSLNFEEARALLGRLEYQRGNLEGALRVFEGIDLQAAIQRLQV 95
Query: 121 SLSEKPPSKRSNKLRSDSSNSGSQHAASLVLEAIYLKSMSLQKLGKAVEAAQQCRSVLDA 180
S+ + P+ + N+ R + S SQHAA+LVLEAIYLK+ SLQKLG+ EAA +C+SVLD+
Sbjct: 96 SVPLEKPATKKNRPR-EPQQSVSQHAANLVLEAIYLKAKSLQKLGRITEAAHECKSVLDS 154
Query: 181 VESIFQRGIPDVMVEQKLQETVSKSVELLPELWKQAGAYQEALASYRRALLSQWNLDDDC 240
VE IFQ+GIPD V+ KLQETVS +VELLP LWK++G YQEA+++YRRALLSQWNLD+DC
Sbjct: 155 VEKIFQQGIPDAQVDNKLQETVSHAVELLPALWKESGDYQEAISAYRRALLSQWNLDNDC 214
Query: 241 CTRIQKRFAVFLLYGGVEASPPSLASQTEGSYVPKNNLEEAXXXXXXXXKKWYLGKTHWD 300
C RIQK FAVFLL+ GVEASPPSL SQ EGSY+P+NN+EEA KK+ LGK WD
Sbjct: 215 CARIQKDFAVFLLHSGVEASPPSLGSQIEGSYIPRNNIEEAILLLMILLKKFNLGKAKWD 274
Query: 301 PSVMEHLTFALSLCGQTSVLAKHLEEVLPGIYPRTGRWYSLALCNYAASHXXXXXXXXXX 360
PSV EHLTFALSLC QT+VLAK LEEV+PG++ R RW +LAL AA
Sbjct: 275 PSVFEHLTFALSLCSQTAVLAKQLEEVMPGVFSRIERWNTLALSYSAAGQNSAAVNLLRK 334
Query: 361 XXXXXXSPGDIMALLLAAKLCSSDYSLASEGVEYARRAVTNVDSSDGHLKSAALHFLGSC 420
P D++ALLLAAKLCS + SLA+EG YA+RA+ N D HLK L LG C
Sbjct: 335 SLHKHEQPDDLVALLLAAKLCSEEPSLAAEGTGYAQRAINNAQGMDEHLKGVGLRMLGLC 394
Query: 421 LAKKSRIATSDHQRSLLQTESLKSLSEAISLDRHNPDLIYDMGIEYAEQRNMQAALKCAK 480
L K++++ TSD +RS LQ+ESLK+L AI+ + +NPDLI+++G++YAEQRN++AA + AK
Sbjct: 395 LGKQAKVPTSDFERSRLQSESLKALDGAIAFEHNNPDLIFELGVQYAEQRNLKAASRYAK 454
Query: 481 EFIDATGGSVSKGWRLLSLVLSAQQRYSEAEVVTDAALDETTKWEQGPLLRIKAKLKVAQ 540
EFIDATGGSV KGWR L+LVLSAQQR+SEAEVVTDAALDET KW+QGPLLR+KAKLK++Q
Sbjct: 455 EFIDATGGSVLKGWRFLALVLSAQQRFSEAEVVTDAALDETAKWDQGPLLRLKAKLKISQ 514
Query: 541 SLPMEAVEAYRALLALVQAQRKAYGTVKNGTEEVDNKVSEFEVWQGLANLYASLSYWRDA 600
S P EAVE YR LLALVQAQRK++G ++ ++ ++KV+EFEVW GLA LY+SLS+W D
Sbjct: 515 SNPTEAVETYRYLLALVQAQRKSFGPLRTLSQMEEDKVNEFEVWHGLAYLYSSLSHWNDV 574
Query: 601 EICLQKAKALKSFSAITLHAEGYTREVREQTQDALAAYFNAVSTEVEHVPSKVSIGALLS 660
E+CL+KA LK +SA LH EG E R++ + ALAA+ + + + VP KV++GALLS
Sbjct: 575 EVCLKKAGELKQYSASMLHTEGRMWEGRKEFKPALAAFLDGLLLDGSSVPCKVAVGALLS 634
Query: 661 KQGPKY---LPVARSFLSDALRHEPTNRMAWFYLGKVHKHDGRLADAADCFQAASMLEES 717
++G + LPVARS LSDALR +PTNR AW+YLG VHK DGR+ADA DCFQAASMLEES
Sbjct: 635 ERGKDHQPTLPVARSLLSDALRIDPTNRKAWYYLGMVHKSDGRIADATDCFQAASMLEES 694
Query: 718 DPIESFRSL 726
DPIESF ++
Sbjct: 695 DPIESFSTI 703
>AT4G28600.1 | chr4:14130046-14132599 FORWARD LENGTH=740
Length = 739
Score = 509 bits (1312), Expect = e-144, Method: Compositional matrix adjust.
Identities = 287/675 (42%), Positives = 424/675 (62%), Gaps = 14/675 (2%)
Query: 61 RVDDGNIQEAESSLREGLSLNYEEARALLGRLEYQRGNVEAALRVFDGIDLQAAIQRFQP 120
++D+GNI+EAE SLRE SLNYEEARALLGR+EYQ+GN+EAALRVF+GID+ + +
Sbjct: 68 KLDNGNIEEAELSLRETSSLNYEEARALLGRIEYQKGNIEAALRVFEGIDINGITVKMKT 127
Query: 121 SLSEKPPSKRSNKLRSDSSNSGS----QHAASLVLEAIYLKSMSLQKLGKAVEAAQQCRS 176
+L+ + K + + S + S +HA SL+ EAI+LK+ SLQ+LG+ EAA+ CR
Sbjct: 128 ALTVREDRKHRRRSKGGFSTAPSPAMSKHAVSLLFEAIFLKAKSLQRLGRFQEAAESCRV 187
Query: 177 VLDAVESIFQRGIPD-VMVEQKLQETVSKSVELLPELWKQAGAYQEALASYRRALLSQWN 235
+LD VE+ G D V + KLQET++K+VELLPELWK A + ++A+ SYRRALL+ W
Sbjct: 188 ILDIVETSLAEGASDNVTGDIKLQETLTKAVELLPELWKLADSPRDAILSYRRALLNHWK 247
Query: 236 LDDDCCTRIQKRFAVFLLYGGVEASPPSLASQTEGSYVPKNNLEEAXXXXXXXXKKWYLG 295
LD + RIQK +AVFLLY G EA PP+L SQTEGS++P+NN+EEA +K L
Sbjct: 248 LDPETTARIQKEYAVFLLYSGEEAVPPNLRSQTEGSFIPRNNVEEAILLLMLLLRKVNLK 307
Query: 296 KTHWDPSVMEHLTFALSLCGQTSVLAKHLEEVLPGIYPRTGRWYSLALCNYAASHXXXXX 355
+ WD ++++HL+FAL++ G + LAK EE+ P + + +++L+LC A
Sbjct: 308 RISWDAAILDHLSFALTIAGDLTALAKQFEELSPELLDQRELYHTLSLCYQGAGEGLVAL 367
Query: 356 XXXXXXXXXXXSPGDIMALLLAAKLCSSDYSLASEGVEYARRAVTNVDSSDGHLKSAALH 415
P LL+A+K+C LA EG++YAR+A+ N+ L AA
Sbjct: 368 GLLRKLFSEREDPNRTSGLLMASKICGERSGLAEEGLDYARKAIGNLGKECSQLDGAARF 427
Query: 416 FLGSCLAKKSRIATSDHQRSLLQTESLKSLSEAISLDRHNPDLIYDMGIEYAEQRNMQAA 475
LG L + SR+A ++ +R Q+E +++L A D NP +++ + +E AEQR + +A
Sbjct: 428 VLGITLTESSRMAVTETERIARQSEGIQALESA---DMTNPRVVHRLALENAEQRKLDSA 484
Query: 476 LKCAKEFIDATGGSVSKGWRLLSLVLSAQQRYSEAEVVTDAALDETTKWEQGPLLRIKAK 535
L AKE + S + W LL+ VLSAQ+R+S+AE + DAAL+ET KWEQG LLR+KAK
Sbjct: 485 LAYAKEALKLGAESDLEVWLLLARVLSAQKRFSDAETIVDAALNETGKWEQGKLLRLKAK 544
Query: 536 LKVAQSLPMEAVEAYRALLALVQAQRKAYGTVKNGTEEVDNKVSEFEV--WQGLANLYAS 593
L++A+ +A++ Y LLAL+Q Q K++ + K + ++ E+ W LA++Y +
Sbjct: 545 LRLAKGEVKDAIKTYTQLLALLQVQSKSFNSAKKLPKGYVKELMSLELGTWHDLAHIYIN 604
Query: 594 LSYWRDAEICLQKAKALKSFSAITLHAEGYTREVREQTQDALAAYFNAVSTEVEHVPSKV 653
LS WRDAE CL +++ + +S++ H EG R Q ++A+ A+ A+ + HVPS
Sbjct: 605 LSQWRDAESCLSRSRLIAPYSSVRYHIEGVLYNRRGQLEEAMEAFTTALDIDPMHVPSLT 664
Query: 654 SIGALLSKQGPKY-LPVARSFLSDALRHEPTNRMAWFYLGKVHKHDGRLA---DAADCFQ 709
S +L + G + + V RSFL +ALR + N AW+ LGK+ K +G ++ +A +CFQ
Sbjct: 665 SKAEILLEVGNRSGIAVVRSFLMEALRIDRLNHSAWYNLGKMFKAEGSVSSMQEAVECFQ 724
Query: 710 AASMLEESDPIESFR 724
AA LEE+ P+E FR
Sbjct: 725 AAVTLEETMPVEPFR 739
>AT1G27460.1 | chr1:9534977-9537424 FORWARD LENGTH=695
Length = 694
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 283/671 (42%), Positives = 399/671 (59%), Gaps = 29/671 (4%)
Query: 61 RVDDGNIQEAESSLREGLSLNYEEARALLGRLEYQRGNVEAALRVFDGIDLQAAIQRFQP 120
+++D + EAES+L+E LSLNYEEARALLGRLEYQRGN +AAL+VF GID++ R
Sbjct: 44 KLEDIQVDEAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFKGIDIKVLTPRIIK 103
Query: 121 SLSEKP-PSKRSNKLRSDSSNSGSQHAASLVLEAIYLKSMSLQKLGKAVEAAQQCRSVLD 179
++ EK P K +K + S H+ SL+LEAI LK+ SL++LG EAA++C+ +LD
Sbjct: 104 AIVEKTLPCKPRSKAVIVPPTTMSMHSVSLLLEAILLKARSLEELGSYKEAAEECKIILD 163
Query: 180 AVESIFQRGIPD-VMVEQKLQETVSKSVELLPELWKQAGAYQEALASYRRALLSQWNLDD 238
VE+ G+PD + KLQ+ K++ELLP LWK+AG + E +ASYRRAL WNLD
Sbjct: 164 VVENALPSGMPDGISGFAKLQDIFQKALELLPLLWKKAGNHHETIASYRRALSRPWNLDP 223
Query: 239 DCCTRIQKRFAVFLLYGGVEASPPSLASQTEGSYVPKNNLEEAXXXXXXXXKKWYLGKTH 298
QK A+ LLYG VEA PK+N+EEA KK +G
Sbjct: 224 QRLAVTQKSLALVLLYGSVEA-------------CPKDNIEEAIVLLMLLVKKMVVGDIQ 270
Query: 299 WDPSVMEHLTFALSLCGQTSVLAKHLEEVLPGIYPRTGRWYSLALCNYAASHXXXXXXXX 358
WDP +M+HLT+ALS+ GQ VLA +LE+ LPG+Y R RWY L+LC AA
Sbjct: 271 WDPELMDHLTYALSMTGQFEVLANYLEQTLPGVYTRGERWYLLSLCYSAAGIDKAAINLL 330
Query: 359 XXXXXXXXS--PGDIMALLLAAKLCSSDYSLASEGVEYARRAVTNVDSSDGHLKSAALHF 416
S I LL AKLCS D + +G+ +A R + +S HL S A F
Sbjct: 331 KMALGPSESRQIPHIPLLLFGAKLCSKDPKHSRDGINFAHRLLDLGNSQSEHLLSQAHKF 390
Query: 417 LGSCLAKKSRIATSDHQRSLLQTESLKSLSEAISLDRHNP--DLIYDMGIEYAEQRNMQA 474
LG C +R + D +R LQ +SL SL+EA + +P D+I+++ +E A QRN+QA
Sbjct: 391 LGVCYGNAARSSKLDSERVFLQKKSLFSLNEAAKRGKADPELDVIFNLSVENAVQRNVQA 450
Query: 475 ALKCAKEFIDATGGSVSKGWRLLSLVLSAQQRYSEAEVVTDAALDETTKWEQGPLLRIKA 534
AL A E+ GG +KGW+ L++VLSA++R +AE + D ++E E+ LLR+KA
Sbjct: 451 ALDGAVEYSSMVGGVSTKGWKHLAIVLSAEKRLKDAESILDFTMEEAGDIEKIELLRLKA 510
Query: 535 KLKVAQSLPMEAVEAYRALLALVQAQRKAYGTVKNGTEEVDNKVSEFEV--WQGLANLYA 592
L++AQ P +A++ +LL L++AQ K +E+ ++ + +FE WQ LA++Y
Sbjct: 511 VLQMAQEQPKKAMKTCSSLLGLIRAQEK--------SEQSESLLQKFETEAWQDLASVYG 562
Query: 593 SLSYWRDAEICLQKAKALKSFSAITLHAEGYTREVREQTQDALAAYFNAVSTEVEHVPSK 652
L W DAE CL+KA+++ +S + G E + ++AL ++F ++S E +HVPS
Sbjct: 563 KLGSWSDAETCLEKARSMCYYSPRGWNETGLCLEAKSLHEEALISFFLSLSIEPDHVPSI 622
Query: 653 VSIGALLSKQGPKYLPVARSFLSDALRHEPTNRMAWFYLGKVHKHDGRLADAADCFQAAS 712
VSI ++ K G + LP A+SFL +ALR +P N AW LG V K G AA+ +QAA
Sbjct: 623 VSIAEVMMKSGDESLPTAKSFLMNALRLDPRNHDAWMKLGHVAKKQGLSQQAAEFYQAAY 682
Query: 713 MLEESDPIESF 723
LE S P++SF
Sbjct: 683 ELELSAPVQSF 693
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.128 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,721,400
Number of extensions: 453073
Number of successful extensions: 1509
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1492
Number of HSP's successfully gapped: 3
Length of query: 726
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 620
Effective length of database: 8,200,473
Effective search space: 5084293260
Effective search space used: 5084293260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)