BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0557900 Os12g0557900|Os12g0557900
(437 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G02700.1 | chr5:609381-611679 REVERSE LENGTH=457 72 7e-13
AT5G60610.1 | chr5:24364049-24365386 FORWARD LENGTH=389 70 2e-12
AT5G56420.1 | chr5:22850863-22852334 REVERSE LENGTH=423 57 2e-08
AT2G04230.1 | chr2:1447025-1448678 REVERSE LENGTH=449 57 2e-08
AT4G00315.1 | chr4:137404-138888 FORWARD LENGTH=442 56 4e-08
AT1G69630.1 | chr1:26191640-26193174 REVERSE LENGTH=452 55 8e-08
AT5G22660.2 | chr5:7536328-7537853 REVERSE LENGTH=451 54 2e-07
AT1G55660.1 | chr1:20800694-20802340 FORWARD LENGTH=493 53 3e-07
AT4G00160.1 | chr4:63465-65365 FORWARD LENGTH=454 53 3e-07
AT5G22720.2 | chr5:7547797-7551174 REVERSE LENGTH=676 53 4e-07
AT4G14103.2 | chr4:8126948-8128590 FORWARD LENGTH=444 51 1e-06
AT1G50980.1 | chr1:18900541-18902057 REVERSE LENGTH=371 50 2e-06
AT5G02910.1 | chr5:677120-678907 FORWARD LENGTH=459 50 2e-06
AT1G16930.1 | chr1:5789987-5791534 FORWARD LENGTH=450 50 2e-06
AT5G22730.1 | chr5:7551632-7553219 REVERSE LENGTH=467 50 3e-06
AT5G56370.1 | chr5:22836200-22837619 REVERSE LENGTH=422 49 5e-06
>AT5G02700.1 | chr5:609381-611679 REVERSE LENGTH=457
Length = 456
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 26 GEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP---LNLEARVNGCTLGK 82
G D I+ +PDDIL I++ +PT T +LSR+WR +W P + L+ TL
Sbjct: 25 GADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDITLKHGAMNQTLTS 84
Query: 83 DVATIYST------LLTHSGPEFELFYD---SVGVQNXXXXXXXXXXXXXXXXXXILSTC 133
A I ++ L +++ P+ + + + S VQN I
Sbjct: 85 YTAPIITSFKLVMDLNSNTVPQVDSWIEFALSRNVQNLSVFVRDFTYSKTYRFPDIFYLS 144
Query: 134 DTLQ--------FPMETACTLDFPHLKELTLSQVNIADSILHGILSRCIVLESLVLDANR 185
+L+ F M CT+ + L+ LTL I D +H ILS C +LESL LD R
Sbjct: 145 SSLKLLDVTLDFFDMIPTCTVSWKSLRNLTLRFCQIPDESIHNILSGCPILESLTLDTCR 204
Query: 186 GCSRLRIS-SLTLQSLGVSDTY 206
RL +S S L+ L ++ Y
Sbjct: 205 LLERLDLSKSPNLRRLDINQQY 226
>AT5G60610.1 | chr5:24364049-24365386 FORWARD LENGTH=389
Length = 388
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 155/391 (39%), Gaps = 64/391 (16%)
Query: 28 DLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP------------------L 69
D IS LPD++L II+ +PTK T +LS++W LW+ P L
Sbjct: 2 DRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKLECDCTEPALRDFILKNL 61
Query: 70 NLEARV---------NGCTLGKDVATIYSTLLTHSGPEFELFYDSVGVQNXXXXXXXXXX 120
L+AR+ L +D+ ++H E + + S
Sbjct: 62 PLQARIIESLYLRFRRESFLFQDIKLWGGIAISHCLRELRIDFFSHYANPYVILPRSLYT 121
Query: 121 XXXXXXXXILSTCDTLQFPMETACTLDFPHLKELTLSQVNIADS-ILHGILSRCIVLESL 179
+L + P + P LK L L V ++ L +LS C VLE L
Sbjct: 122 CKSLVTLKLLGLGIRVDVPRDVC----LPSLKTLLLQCVAYSEEDPLRLLLSCCPVLEDL 177
Query: 180 VL---DANRGCSRLRISSLTLQSLGV----------------SDTYFSVEGMLE--EVII 218
V+ DAN+ L + TLQ L + S YF VE E +I
Sbjct: 178 VIELDDANQNVKALVVIVPTLQCLSLKIPASCSDERYLIVTPSLKYFKVEDDREIFNALI 237
Query: 219 EDAPLLERLTPPVIWHEGFVIRVIQAPKLKTLGYLSQKISTLQL-GNMVFQKLVPVSLS- 276
E+ P LE V H ++ + + K TL L I + +VF++L + LS
Sbjct: 238 ENMPELEEADIYVTQHIETLLESVTSVKRLTLRQLYNSIDEYKCRAGIVFKQLEQLELSI 297
Query: 277 --NVMRAMKILALHTAPDLDVV-IDFLKFFPCVEKLYIVALNQGNFKNVRRYVSLECLDL 333
+ + I L +P+L V+ +D + E+ Q N+KN++R V +CL
Sbjct: 298 CSDNWTKLVIWLLQNSPNLRVLNLDADSDYERYEEY-----EQDNWKNIQRSVP-KCLKS 351
Query: 334 HLKMVEFINYHGNLSDLNFIKFFVLNAQVLE 364
LK +EF Y + +F+ F A+ L+
Sbjct: 352 SLKTLEFAGYTARPEERDFLSFIFKKARCLK 382
>AT5G56420.1 | chr5:22850863-22852334 REVERSE LENGTH=423
Length = 422
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 31/230 (13%)
Query: 28 DLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP-LNLEARVNGCTLGKDVAT 86
D +S+LPDD L I++ LPTKD T +LS++WR LW P LN + R++ T +
Sbjct: 6 DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPRFSQF 65
Query: 87 IYSTLLTHSGPEFELF-----------------YDSVGVQNXXXXXXXX--XXXXXXXXX 127
+ +LL H P E + +GV
Sbjct: 66 VDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYCSGEEPIRLP 125
Query: 128 XILSTCDTL------QFPMETA-CTLDFPHLKELTLSQVN-IADSILHGILSRCIVLESL 179
L TC TL +E A C + F LK L L V + D L I+S C LE L
Sbjct: 126 KCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSLPRIISSCSSLEDL 185
Query: 180 VLDANRG--CSRLRISSLTLQSLGVSDTYFSVEGMLEEVIIEDAPLLERL 227
V+ G + +++ +L++L + + + EG + +I D P L+R+
Sbjct: 186 VVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLI-DTPKLKRV 234
>AT2G04230.1 | chr2:1447025-1448678 REVERSE LENGTH=449
Length = 448
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 36/215 (16%)
Query: 26 GEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP-LNLEARVNGCTLGKDV 84
ED IS LPD +L I++ LPT++ T +LS++WR LW P L ++ N ++
Sbjct: 11 NEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNPVFDDDNI 70
Query: 85 ------ATIYSTLLTHSGPEFELFYDSV-------------------GVQNXXXXXXXXX 119
+Y TL H P E + S GV+
Sbjct: 71 DPTMFSENVYKTLSLHKAPVLESLHLSFEGRTDCLHVGIWIATAFARGVRKLVLDSFYQE 130
Query: 120 XXXXXXXXXILSTCDTLQ-FPMETACTLDFP------HLKELTLSQVNIAD-SILHGILS 171
+ S D+L+ ++ A LDFP L++L L QV+ D + +L
Sbjct: 131 DQTVTLPSVLFSYNDSLEILKLKCAIDLDFPSRVCLKSLRKLYLDQVHFKDEESVCNLLC 190
Query: 172 RCIVLESLVLD--ANRGCSRLRISSLTLQSLGVSD 204
C L+ LV+ +N + I+S +LQ L + D
Sbjct: 191 GCPSLQDLVVHRYSNADVATFTIASPSLQRLTIED 225
>AT4G00315.1 | chr4:137404-138888 FORWARD LENGTH=442
Length = 441
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 28 DLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP-LNLEARVNGCTLGKDVAT 86
D S+LPD++L +++ LPTKD T +LS +W+ LW P L + R + G+ +A
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQGLAR 61
Query: 87 IYS-TLLTHSGPEFE-----LFYDSVGVQNXXXXXXXXXXXXXXXXXXILS--TCDTLQF 138
+ +LL H P E L Y ++G LS C +
Sbjct: 62 FITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAVHDSNVRELSLKLCTFAER 121
Query: 139 PMETACTLD-----------------------FPHLKELTLSQVNIADS-ILHGILSRCI 174
P + +L P LK L L +V +D LH +LS C
Sbjct: 122 PTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSNCP 181
Query: 175 VLESLVLDANR 185
VLE LV++ +R
Sbjct: 182 VLEDLVVERDR 192
>AT1G69630.1 | chr1:26191640-26193174 REVERSE LENGTH=452
Length = 451
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 66/263 (25%)
Query: 14 DESSNPQLAPRGGE--DLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP--- 68
DE + +G + D IS+LPD +L ++ LPTKD T +LSR+WR LW+ P
Sbjct: 2 DEDREKHVRAKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLD 61
Query: 69 ---------------------LNLEARVNGCTLGKDVATIY-----------STLLTHSG 96
N E+ + L D Y +T++T
Sbjct: 62 LDNTDFQEFNTFLSFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRKV 121
Query: 97 PEFELFYDSVGVQNXXXXXXXXXXXXXXXXXXILSTCDTL------QFPMETACTLDFPH 150
++ DS G + TC++L + + + P
Sbjct: 122 QHIDVLDDSYGSWEVQLPSS-------------IYTCESLVSLKLCGLTLASPEFVSLPS 168
Query: 151 LKELTLSQVNIADSI-LHGILSRCIVLESLVLDANRGCSRLRISSLTLQSL----GVSDT 205
LK + L AD + L ++++C VLESL ++ + C + + + QSL V+D
Sbjct: 169 LKVMDLIITKFADDMGLETLITKCPVLESLTIERS-FCDEIEVLRVRSQSLLRFTHVAD- 226
Query: 206 YFSVEGMLEEVIIE-DAPLLERL 227
S EG++E++++ DAP LE L
Sbjct: 227 --SDEGVVEDLVVSIDAPKLEYL 247
>AT5G22660.2 | chr5:7536328-7537853 REVERSE LENGTH=451
Length = 450
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 17 SNPQLAPRGGEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAPL 69
SN R GED IS LPD +L+ I++ LPT++ T +LS +W+ LW S P+
Sbjct: 2 SNQGAIRRSGEDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPV 54
>AT1G55660.1 | chr1:20800694-20802340 FORWARD LENGTH=493
Length = 492
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 28 DLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP-LNLEARVNGCTLGKDVAT 86
D IS+LPD++L +++ L TKD T +LS +W+ LW P L R + G+ +A
Sbjct: 53 DKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEGQGLAR 112
Query: 87 -IYSTLLTHSGPEFE-----LFYDSVG----------------VQNXXXXXXXXXXXXXX 124
I S+L H P E Y ++G V N
Sbjct: 113 FITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSNVRELSLKLFNFAEL 172
Query: 125 XXXXILSTC---DTLQFPMETACTLD------FPHLKELTLSQVNIADS-ILHGILSRCI 174
S C + ++ +D P LK L L +V +D+ LH +LS C
Sbjct: 173 PTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDANSLHRLLSNCP 232
Query: 175 VLESLVLDANR 185
VLE LV++ ++
Sbjct: 233 VLEDLVMERDK 243
>AT4G00160.1 | chr4:63465-65365 FORWARD LENGTH=454
Length = 453
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 GEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAPLNLE 72
G+D IS LPD +L I++ LPTK T + S+QWRPLW+ P NLE
Sbjct: 14 GKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVP-NLE 59
>AT5G22720.2 | chr5:7547797-7551174 REVERSE LENGTH=676
Length = 675
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 22 APRGGEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP 68
+ + EDLIS+LPD ++T I+ L TK T +LS++WR LW S P
Sbjct: 17 SSKAKEDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLWLSTP 63
>AT4G14103.2 | chr4:8126948-8128590 FORWARD LENGTH=444
Length = 443
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 25 GGEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP 68
G D+IS LPDDI + I++ LPTK+ A T +LS++WR L+ P
Sbjct: 5 GSRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVP 48
>AT1G50980.1 | chr1:18900541-18902057 REVERSE LENGTH=371
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 30 ISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQ-------SAPLNLEARVNGCTLGK 82
IS PD +L I++LLP+KD T +LS++WR LW+ S+ +L+ ++N K
Sbjct: 34 ISEFPDKVLLKILSLLPSKDVVATGVLSKRWRSLWKDVKTFRTSSVESLQLKINPSATNK 93
Query: 83 DVATIYSTLLTHSGPEFEL 101
D+ ++ + + S E +
Sbjct: 94 DIQSLVNMAVARSMRELRI 112
>AT5G02910.1 | chr5:677120-678907 FORWARD LENGTH=459
Length = 458
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 26 GEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP-LNLEARVNGCTLGKDV 84
G D IS LPD+IL I++ +PTK T +LS++WR +W P L+++ R D
Sbjct: 9 GMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCR------RADP 62
Query: 85 ATIYSTLLTHSGPEFELFY 103
+I TL S P+ F+
Sbjct: 63 NSIDKTLSFFSAPKITSFH 81
>AT1G16930.1 | chr1:5789987-5791534 FORWARD LENGTH=450
Length = 449
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 111/262 (42%), Gaps = 38/262 (14%)
Query: 12 LDDESSNPQLAPRGGEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP-LN 70
+DDE+S + + D IS LPD +L I++ L TK+ CT +LS++WR LW P L+
Sbjct: 1 MDDETSVKE--KQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLD 58
Query: 71 LEAR-----------VNGCTLGKD-------VATIYSTLLTHSGPEFELFYDSV---GVQ 109
L++ VN LG + IY + H F+ + ++V V
Sbjct: 59 LDSNNFPDDDVFVSFVNR-FLGSENEQHLERFKLIYE-VNEHDASRFKSWINAVIKRRVC 116
Query: 110 NXXXXXXXXXXXXXXXXXXILSTCDTL------QFPMETACTLDFPHLKELTLSQVNI-A 162
+ L +C+ L + ++ ++ P +K + L V A
Sbjct: 117 HFNVHNEVDDDDELVKMPLSLYSCERLVNLQLYRVALDHPESVSLPCVKIMHLDMVKYDA 176
Query: 163 DSILHGILSRCIVLESL--VLDANRGCSRLRISSLTLQSLGVSDTYFSVEGMLEEVIIED 220
DS L ++S C VLE L V D N + + S +L+S + + + V+ D
Sbjct: 177 DSTLEILISGCPVLEELTIVRDPNDSLEVVCVRSQSLKSFKIDSERYESQN---HVVTID 233
Query: 221 APLLERLTPPVIWHEGFVIRVI 242
AP LE + + F+I I
Sbjct: 234 APRLEYMNLCDHRSDSFIIHNI 255
>AT5G22730.1 | chr5:7551632-7553219 REVERSE LENGTH=467
Length = 466
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 25 GGEDLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP 68
GEDLIS+LPD ++T I+ LP KD T LS +W+ LW P
Sbjct: 25 AGEDLISKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWLLIP 68
>AT5G56370.1 | chr5:22836200-22837619 REVERSE LENGTH=422
Length = 421
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 28 DLISRLPDDILTGIITLLPTKDGACTQMLSRQWRPLWQSAP-LNLEARVNGCTLGKDVAT 86
D IS LPDD L I++LLPTKD T +LS++WR LW+ P L G V
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYSLIDKNADHGTFVRF 61
Query: 87 IYSTLLTHSGPEFELFYDSVGVQ 109
+ +LL P E + +G Q
Sbjct: 62 VDRSLLLSMAPVLESLHLKLGRQ 84
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.140 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,007,140
Number of extensions: 352467
Number of successful extensions: 1432
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 1438
Number of HSP's successfully gapped: 18
Length of query: 437
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 335
Effective length of database: 8,310,137
Effective search space: 2783895895
Effective search space used: 2783895895
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 113 (48.1 bits)