BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0556500 Os12g0556500|AK110372
(671 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G25800.1 | chr4:13125224-13127765 FORWARD LENGTH=602 163 3e-40
AT5G57580.1 | chr5:23314994-23317683 REVERSE LENGTH=648 161 1e-39
AT4G31000.1 | chr4:15103402-15105799 FORWARD LENGTH=563 152 4e-37
AT5G62570.2 | chr5:25114934-25116967 FORWARD LENGTH=495 149 7e-36
AT2G18750.1 | chr2:8125827-8128363 FORWARD LENGTH=623 145 1e-34
AT5G26920.1 | chr5:9475860-9478448 FORWARD LENGTH=564 143 3e-34
AT2G24300.2 | chr2:10340913-10343457 FORWARD LENGTH=600 142 6e-34
AT1G73805.1 | chr1:27745761-27749178 REVERSE LENGTH=452 136 4e-32
>AT4G25800.1 | chr4:13125224-13127765 FORWARD LENGTH=602
Length = 601
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 203/425 (47%), Gaps = 41/425 (9%)
Query: 121 RKLESRLERIDQRI--ENLNHKVDQITPLRRSHCNHQHPMQGTNNEGANAEGVETNEDDD 178
+KL S LE I +R+ E + + ++ P R + + P + +G N
Sbjct: 34 QKLCSSLEPILRRVVSEEVERALAKLVPTRLTTSSVFSPKRIGGPDGRN----------- 82
Query: 179 KNTCVRLRFLNEMKPPIYHDDELKAENSEDIRIGIFDGE--QMIKSGPLSKVKLEILALE 236
++L F + + P++ ++ E I + + D + + GP + +KLE++ L
Sbjct: 83 ----LQLHFKSRLSLPLFTGGRVEGEQGATIHVVLIDANTGRPVTVGPEASLKLEVVVLG 138
Query: 237 GNFPYNSMESWTTKEFNEHRACGRDERGDVLAGERTVQLINGEASLGAIKFREGSCKARK 296
G+F E WT +EF H R+ + +L G+ V L G +LG I F + S R
Sbjct: 139 GDFNNEDDEDWTQEEFESHVVKEREGKRPLLTGDLFVVLKEGVGTLGEIVFTDNSSWIRS 198
Query: 297 GKFILAARVCDSARTGVHVQEAVMTPVVVQDRRNKSNEKSHPPKLDDKVHRLEEIAINGI 356
KF L RV G+ ++EA V+D R + +K +PP L+D+V RLE+I +G
Sbjct: 199 RKFRLGLRVPSGYCDGIRIREAKTEAFSVKDHRGELYKKHYPPALNDEVWRLEKIGKDGA 258
Query: 357 YCKRLVEKGIKTVKDFLKALNKDPDNLANILHMKKGSKAWEKMVTHARDCSLEGKPELKS 416
+ KRL GI TV+ FL+ L +D L IL +K W+ +V HA+ C L GK +
Sbjct: 259 FHKRLTAAGIVTVEGFLRQLVRDSTKLRAILGSGMSNKMWDLLVEHAKTCVLSGKLYI-Y 317
Query: 417 YPVAQTNVVLIFDCVNSLVGAWFGGSYIASDSLSSAQQVIVDKLKGEAYQLLDQLPFDYI 476
Y +V ++F+ + L G Y+++DSLS +Q+V VD L +AY+ +Q+ +Y
Sbjct: 318 YTEDSRSVGVVFNNIYELSGLITEDQYLSADSLSESQKVYVDGLVKKAYENWNQV-VEYE 376
Query: 477 MEGGFPILNPMNANADYRAQGTEAVGGLDHAQIDPSFANANYQDQSTAQAGQEQFSSAAV 536
E + +N N R LD +Q DP A A+Y + QF A+
Sbjct: 377 GE------SLLNLNQPER---------LDISQTDPVTALASY-----STVPLSQFPEFAI 416
Query: 537 AGWCQ 541
G+ Q
Sbjct: 417 EGYNQ 421
>AT5G57580.1 | chr5:23314994-23317683 REVERSE LENGTH=648
Length = 647
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 172/350 (49%), Gaps = 20/350 (5%)
Query: 121 RKLESRLERIDQRI--ENLNHKVDQITPLRRSHCNHQHPMQGTNNEGANAEGVETNEDDD 178
+KL S LE I +R+ E L + ++ P R + + P + +G
Sbjct: 45 QKLCSSLEPILRRVVSEELERALAKLGPARLTGSSGSSPKRIEGPDGRK----------- 93
Query: 179 KNTCVRLRFLNEMKPPIYHDDELKAENSEDIRIGIFDGE--QMIKSGPLSKVKLEILALE 236
++L F + + P++ +++ E I + + D + + GP + KL I+ LE
Sbjct: 94 ----LQLHFKSRLSLPLFTGGKVEGEQGAVIHVVLIDANTGRAVVYGPEASAKLHIVVLE 149
Query: 237 GNFPYNSMESWTTKEFNEHRACGRDERGDVLAGERTVQLINGEASLGAIKFREGSCKARK 296
G+F E WT +EF H R + +L GE V L G +LG + F + S R
Sbjct: 150 GDFNTEDDEDWTQEEFESHVVKERSGKRPLLTGEVYVTLKEGVGTLGELVFTDNSSWIRS 209
Query: 297 GKFILAARVCDSARTGVHVQEAVMTPVVVQDRRNKSNEKSHPPKLDDKVHRLEEIAINGI 356
KF L RV G+ ++EA VV+D R + +K +PP L+D V RL++I +G
Sbjct: 210 RKFRLGLRVVSGCCDGMRIREAKTEAFVVKDHRGELYKKHYPPALNDDVWRLDKIGKDGA 269
Query: 357 YCKRLVEKGIKTVKDFLKALNKDPDNLANILHMKKGSKAWEKMVTHARDCSLEGKPELKS 416
+ K+L +GI TV+DFL+ + KD L IL +K W+ +V HA+ C K +
Sbjct: 270 FHKKLTAEGINTVEDFLRVMVKDSPKLRTILGSGMSNKMWDALVEHAKTCVQSSKLYIY- 328
Query: 417 YPVAQTNVVLIFDCVNSLVGAWFGGSYIASDSLSSAQQVIVDKLKGEAYQ 466
Y NV ++F+ + L G G Y ++DSL+ +Q+V V+ L +AY+
Sbjct: 329 YAEDSRNVGVVFNNIYELSGLISGDQYFSADSLTDSQKVYVEGLVKKAYE 378
>AT4G31000.1 | chr4:15103402-15105799 FORWARD LENGTH=563
Length = 562
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 160/306 (52%), Gaps = 14/306 (4%)
Query: 183 VRLRFLNEMKPPIYHDDELKAENSEDIRIGIFDGE--QMIKSGPLSKVKLEILALEGNFP 240
++LRF M P ++ +++ E I + + D +I++G S KL I+ L+G+F
Sbjct: 93 LQLRFRTRMPPHLFTGGKVEGEQGSAIHVVLIDANTGNVIQTGEESMTKLNIVVLDGDFN 152
Query: 241 YNSMESWTTKEFNEHRACGRDERGDVLAGERTVQLINGEASLGAIKFREGSCKARKGKFI 300
+ WT + F R+ + +L G+R V + G +LG + F + S R KF
Sbjct: 153 DEDDKDWTREHFESFEVKEREGKRPILTGDRHVIIKEGVGTLGKLTFTDNSSWIRSRKFR 212
Query: 301 LAARVCDSARTGVHVQEAVMTPVVVQDRRNKSNEKSHPPKLDDKVHRLEEIAINGIYCKR 360
L + TG H++EA P V+D R + +K +PP L D+V RL++IA +G K+
Sbjct: 213 LGVKPA----TGFHIREAKTEPFAVKDHRGELYKKHYPPVLHDEVWRLDKIAKDGALHKK 268
Query: 361 LVEKGIKTVKDFLKALNKDPDNLANILHMKKGSKAWEKMVTHARDCSLEGKPELKSYPVA 420
L++ I TV+DFL+ L KDP L ++L ++ W+ V HA+ C L GK L +Y
Sbjct: 269 LLKSNIVTVEDFLQILMKDPQKLRSLLGSGMSNRMWDNTVEHAKTCVLGGK--LYAYYTD 326
Query: 421 QTN-VVLIFDCVNSLVGAWFGGSYIASDSLSSAQQVIVDKLKGEAYQLLDQLPFDYIMEG 479
QT+ ++F+ + G G +++S+SL+ Q++ D L AY+ + ++E
Sbjct: 327 QTHQTAVVFNHIYEFQGLIANGHFLSSESLNHDQKISADTLVKTAYE-----NWHKVVEY 381
Query: 480 GFPILN 485
G +LN
Sbjct: 382 GGKLLN 387
>AT5G62570.2 | chr5:25114934-25116967 FORWARD LENGTH=495
Length = 494
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 171/338 (50%), Gaps = 14/338 (4%)
Query: 172 ETNEDDDKNTCVRLRFLNEMKPPIYHDDELKAENSEDIRIGIFDGE--QMIKSGPLSKVK 229
ET+ + +N ++L+FLN + P++ ++ + + IR+G+ D Q+ SGP S K
Sbjct: 62 ETHPLESRN--LQLKFLNNLSLPVFTSARIEGDEGQAIRVGLIDPSTGQIFSSGPASSAK 119
Query: 230 LEILALEGNFPYNSMESWTTKEFNEHRACGRDERGDVLAGERTVQLINGEASLGAIKFRE 289
LE+ +EG+F NS+ WT ++ + R+ + +L G L +G + I F +
Sbjct: 120 LEVFVVEGDF--NSVSDWTDEDIRNNIVREREGKKPLLNGNVFAVLNDGIGVMDEISFTD 177
Query: 290 GSCKARKGKFILAARVCDSARTGVHVQEAVMTPVVVQDRRNKSNEKSHPPKLDDKVHRLE 349
S R KF L R+ D V ++EA+ VV+D R + +K HPP L D+V RLE
Sbjct: 178 NSSWTRSRKFRLGVRIVDQFDY-VKIREAITESFVVRDHRGELYKKHHPPSLFDEVWRLE 236
Query: 350 EIAINGIYCKRLVEKGIKTVKDFLKALNKDPDNLANILHMKKGSKAWEKMVTHARDCSLE 409
+I +G + +RL I TVKDFL + + L +L SK WE + HAR C L+
Sbjct: 237 KIGKDGAFHRRLNLSNINTVKDFLTHFHLNSSKLRQVLGTGMSSKMWEITLDHARSCVLD 296
Query: 410 GKPELKSYPVAQTNVVLIFDCVNSLVGAWFGGSYIASDSLSSAQQVIVDKLKGEAYQLLD 469
+ P Q ++F+ V ++G YI ++ LS ++ + + +A L+
Sbjct: 297 SSVHVYQAPGFQKKTAVVFNVVAQVLGLLVDFQYIPAEKLSEIEKAQAEVMVIDALSHLN 356
Query: 470 QLPFDYIMEGGFPILNPMNANADYRAQGTEAVGGLDHA 507
++ Y E + N +NA A +QG+ V G+D++
Sbjct: 357 EV-ISYDDEVSM-MRNVLNAPA---SQGS--VAGIDYS 387
>AT2G18750.1 | chr2:8125827-8128363 FORWARD LENGTH=623
Length = 622
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 177/363 (48%), Gaps = 25/363 (6%)
Query: 113 SLQFSKLERKLESRLERIDQRI--ENLNHKVDQITPLRRSHCNHQHPMQGTNNEGANAEG 170
+L+ L+R L S LE I +R+ E + + ++ P R S + ++G G N
Sbjct: 44 ALKMDSLQR-LCSSLEPILRRVVSEEVERALAKLGPARLSERSSPKRIEGIG--GRN--- 97
Query: 171 VETNEDDDKNTCVRLRFLNEMKPPIYHDDELKAENSEDIRIGIFDGE--QMIKSGPLSKV 228
++L+F + + P++ +++ E I + + D ++ GP +
Sbjct: 98 ------------LQLQFRSRLSVPLFTGGKIEGEQGAAIHVVLLDMTTGHVLTVGPEASA 145
Query: 229 KLEILALEGNFPYNSMESWTTKEFNEHRACGRDERGDVLAGERTVQLINGEASLGAIKFR 288
KL+++ L+G+F + W+ +EF H R + +L G+ V L G +LG + F
Sbjct: 146 KLDVVVLDGDFNTEDDDGWSGEEFEGHLVKERQGKRPLLTGDVQVTLKEGVGTLGELIFT 205
Query: 289 EGSCKARKGKFILAARVCDSARTGVHVQEAVMTPVVVQDRRNKSNEKSHPPKLDDKVHRL 348
+ S R KF L RV G+ V+EA V+D R + +K +PP LDD+V RL
Sbjct: 206 DNSSWIRCRKFRLGLRVSSGYCEGMRVREAKTEAFTVKDHRGELYKKHYPPALDDEVWRL 265
Query: 349 EEIAINGIYCKRLVEKGIKTVKDFLKALNKDPDNLANILHMKKGSKAWEKMVTHARDCSL 408
E+I +G + K+L + GI VK+FL+ + KD L IL ++ WE + H++ C L
Sbjct: 266 EKIGKDGAFHKKLNKAGIYNVKEFLRLMVKDSQKLRTILGSGMSNRMWETLAEHSKTCVL 325
Query: 409 EGKPELKSYPVAQTNVVLIFDCVNSLVGAWFGGSYIASDSLSSAQQVIVDKLKGEAYQLL 468
E+ + +V ++F+ + G G Y +DSLS Q+ VD L +AY+
Sbjct: 326 ---SEMLYVYYPEDSVGVVFNNIYEFSGLISGKQYYPADSLSDNQKGYVDGLVRKAYENW 382
Query: 469 DQL 471
+Q+
Sbjct: 383 EQV 385
>AT5G26920.1 | chr5:9475860-9478448 FORWARD LENGTH=564
Length = 563
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 152/292 (52%), Gaps = 17/292 (5%)
Query: 183 VRLRFLNEMKPPIYHDDELKAENSEDIRIGIFDG--EQMIKSGPLSKVKLEILALEGNFP 240
++L F+N I+ +++AE+ + I + D ++ +GP S ++E++ L +F
Sbjct: 86 LKLCFINSPPSSIFTGSKIEAEDGSPLVIELVDATTNTLVSTGPFSSSRVELVPLNADF- 144
Query: 241 YNSMESWTTKEFNEHRACGRDERGDVLAGERTVQLINGEASL-GAIKFREGSCKARKGKF 299
+ ESWT + FN + R+ + +L G+ TV L NG + G I F + S R KF
Sbjct: 145 --TEESWTVEGFNRNILTQREGKRPLLTGDLTVMLKNGVGVITGDIAFSDNSSWTRSRKF 202
Query: 300 ILAARVCDSARTGVHVQEAVMTPVVVQDRRNKSNEKSHPPKLDDKVHRLEEIAINGIYCK 359
L A++ TG EA +D+R +S +K HPP D+V RLE+IA +G+
Sbjct: 203 RLGAKL-----TGDGAVEARSEAFGCRDQRGESYKKHHPPCPSDEVWRLEKIAKDGVSAT 257
Query: 360 RLVEKGIKTVKDFLKALNKDPDNLANILHMKKGSKAWEKMVTHARDCSLEGKPELKSYPV 419
RL E+ I TVKDF + + + L NI+ K W +V+HA DC L+ + E Y
Sbjct: 258 RLAERKILTVKDFRRLYTVNRNELHNIIGAGVSKKTWNTIVSHAMDCVLD-ETECYIYNA 316
Query: 420 AQTNVVLIFDCVNSLVGAWFGGSYIASDSLSSAQQVIVDKLKGEAYQLLDQL 471
V L+F+ V L+ F G + + + Q I+D+LK EAYQ L+++
Sbjct: 317 NTPGVTLLFNSVYELIRVSFNG-----NDIQNLDQPILDQLKAEAYQNLNRI 363
>AT2G24300.2 | chr2:10340913-10343457 FORWARD LENGTH=600
Length = 599
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 5/287 (1%)
Query: 183 VRLRFLNEMKPPIYHDDELKAENSEDIRIGIFDGE--QMIKSGPLSKVKLEILALEGNFP 240
++L F M P ++ +++ E I + + D ++++G S KL ++ LEG+F
Sbjct: 89 LQLHFRTRMPPHLFTGGKVEGERGSAIHVVLIDANTGNVVQTGEESASKLNVVVLEGDFN 148
Query: 241 YNSMESWTTKEFNEHRACGRDERGDVLAGERTVQLINGEASLGAIKFREGSCKARKGKFI 300
E WT + F R+ + +L G+ + L G +LG + F + S R KF
Sbjct: 149 DEDDEDWTREHFESFEVKEREGKRPILTGDTQIVLKEGVGTLGELTFTDNSSWIRSRKFR 208
Query: 301 LAARVCDSARTGVHVQEAVMTPVVVQDRRNKSNEKSHPPKLDDKVHRLEEIAINGIYCKR 360
L + ++EA P V+D R + +K +PP + D+V RL+ IA +G+ K+
Sbjct: 209 LGVKPASGYGDSFCIREAKTEPFAVKDHRGELYKKHYPPAVHDEVWRLDRIAKDGVLHKK 268
Query: 361 LVEKGIKTVKDFLKALNKDPDNLANILHMKKGSKAWEKMVTHARDCSLEGKPELKSYPVA 420
L++ I TV+DFL+ L KDP L N+L ++ WE V HA+ C L GK L +
Sbjct: 269 LLKANIVTVEDFLRLLVKDPQKLRNLLGSGMSNRMWENTVEHAKTCVLGGK--LYVFYTD 326
Query: 421 QTNVV-LIFDCVNSLVGAWFGGSYIASDSLSSAQQVIVDKLKGEAYQ 466
QT+ ++F+ + G G +++ +SL+ Q++ D L AY+
Sbjct: 327 QTHATGVVFNHIYEFRGLITNGQFLSLESLNHDQKISADILVKLAYE 373
>AT1G73805.1 | chr1:27745761-27749178 REVERSE LENGTH=452
Length = 451
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 174/356 (48%), Gaps = 37/356 (10%)
Query: 182 CVRLRFLNEMKPPIYHDDELKAENSEDIRIGIFDGEQMIKSGPLSK-VKLEILALEGNFP 240
++L F + PI+ ++ ++ + I + D K L++ +KL+I+AL G+FP
Sbjct: 89 TLKLIFRKNLMTPIFTGSKISDVDNNPLEIILVDDSN--KPVNLNRPIKLDIVALHGDFP 146
Query: 241 YNSMESWTTKEFNEHRACGRDERGDVLAGERTVQLINGEASLGAIKFREGSCKARKGKFI 300
S + WT+ EF + RD + +LAGE +V + NG A++G I F + S R KF
Sbjct: 147 --SGDKWTSDEFESNIIKERDGKRPLLAGEVSVTVRNGVATIGEIVFTDNSSWIRSRKFR 204
Query: 301 LAARVCD-SARTGVHVQEAVMTPVVVQDRRNKSNEKSHPPKLDDKVHRLEEIAINGIYCK 359
+ A+V S+ GV V EA+ +VV+D R + +K HPP L+D+V RLE+I +G + K
Sbjct: 205 IGAKVAKGSSGQGVVVCEAMTEAIVVRDHRGELYKKHHPPMLEDEVWRLEKIGKDGAFHK 264
Query: 360 RLVEKGIKTVKDFLKALNKDPDNLANILHMKKGSKAWEKMVTHARDCSLEGKPELKSYPV 419
+L + I TV+DFLK D D L IL + WE + HAR+C L K + P
Sbjct: 265 KLSSRHINTVQDFLKLSVVDVDELRQILGPGMSDRKWEVTLKHARECILGNKLYISRGP- 323
Query: 420 AQTNVVLIFDCVNSLVGAWFGGSYIASDSLSSAQQVIVDKLKGEAYQLLDQLPFDYIMEG 479
N +I + + ++ A G ++S S Q V L +AY +G
Sbjct: 324 ---NFFMILNPICEVMKALIDGHVLSSQ--ESLNQPYVKNLVRDAYS-----------KG 367
Query: 480 GFPILNPMNAN-ADYRAQGTEAVGGLDHAQIDPSFANANYQ----DQSTAQAGQEQ 530
F + AN A QG + +D +A ++YQ D+S Q G Q
Sbjct: 368 NFLEVGERTANEAALLTQGDD---------LDQQYAASHYQNIEIDKSYQQNGYVQ 414
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.132 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,871,900
Number of extensions: 586485
Number of successful extensions: 1667
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1655
Number of HSP's successfully gapped: 8
Length of query: 671
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 566
Effective length of database: 8,227,889
Effective search space: 4656985174
Effective search space used: 4656985174
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)