BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0538700 Os12g0538700|AK063610
(104 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G47870.1 | chr2:19603339-19603650 FORWARD LENGTH=104 122 4e-29
AT3G62950.1 | chr3:23266303-23266614 FORWARD LENGTH=104 114 8e-27
AT4G15690.1 | chr4:8934444-8934752 FORWARD LENGTH=103 112 5e-26
AT4G15670.1 | chr4:8929237-8929545 FORWARD LENGTH=103 110 1e-25
AT4G15700.1 | chr4:8937545-8937853 FORWARD LENGTH=103 110 2e-25
AT2G30540.1 | chr2:13011259-13011567 REVERSE LENGTH=103 110 2e-25
AT4G15660.1 | chr4:8925928-8926236 FORWARD LENGTH=103 109 2e-25
AT1G06830.1 | chr1:2097189-2097488 FORWARD LENGTH=100 108 5e-25
AT2G47880.1 | chr2:19605124-19605432 FORWARD LENGTH=103 107 9e-25
AT4G15680.1 | chr4:8931813-8932121 FORWARD LENGTH=103 107 1e-24
AT3G21460.1 | chr3:7557567-7557875 REVERSE LENGTH=103 107 1e-24
AT3G62960.1 | chr3:23268780-23269088 FORWARD LENGTH=103 105 6e-24
AT5G18600.1 | chr5:6183466-6183774 REVERSE LENGTH=103 104 9e-24
AT3G02000.1 | chr3:332512-332922 REVERSE LENGTH=137 100 2e-22
AT5G14070.1 | chr5:4541915-4542337 FORWARD LENGTH=141 100 2e-22
AT1G03020.1 | chr1:698207-698515 REVERSE LENGTH=103 89 6e-19
AT3G62930.1 | chr3:23261538-23261846 REVERSE LENGTH=103 87 1e-18
AT1G28480.1 | chr1:10013634-10014047 REVERSE LENGTH=138 80 2e-16
AT4G33040.1 | chr4:15940779-15941213 REVERSE LENGTH=145 67 2e-12
AT5G63030.1 | chr5:25286352-25287517 FORWARD LENGTH=126 66 3e-12
AT5G11930.1 | chr5:3845165-3845611 REVERSE LENGTH=149 62 8e-11
AT5G40370.2 | chr5:16147826-16148900 REVERSE LENGTH=137 59 6e-10
AT4G28730.1 | chr4:14199174-14200712 FORWARD LENGTH=175 58 8e-10
AT5G20500.1 | chr5:6938652-6939665 FORWARD LENGTH=136 52 5e-08
>AT2G47870.1 | chr2:19603339-19603650 FORWARD LENGTH=104
Length = 103
Score = 122 bits (306), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
MERV L++EKA VIFT S+C MCH++ +LF +LG A+HELD+DP G DMER L R
Sbjct: 1 MERVRDLASEKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDP-QGPDMERALFRV 59
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
G +P VPAVF+ G+ VGS V+S H+ G L MLKA+ AIWL
Sbjct: 60 FGSNPAVPAVFVGGRYVGSAKDVISFHVDGSLKQMLKASNAIWL 103
>AT3G62950.1 | chr3:23266303-23266614 FORWARD LENGTH=104
Length = 103
Score = 114 bits (286), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
MER+ LS++KA VIFT S+C MCH++ +LF +LG A+HELD+DP GR+MER L R
Sbjct: 1 MERIRDLSSKKAAVIFTKSSCCMCHSIKTLFYELGASPAIHELDKDP-EGREMERAL-RA 58
Query: 61 LGRS-PPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG S P VPAVF+ G+ +GS ++S H+ G L MLK A AIWL
Sbjct: 59 LGSSNPAVPAVFVGGRYIGSAKDIISFHVDGSLKQMLKDAKAIWL 103
>AT4G15690.1 | chr4:8934444-8934752 FORWARD LENGTH=103
Length = 102
Score = 112 bits (279), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
ME + K+ +EK+VVIF+ ++C M HT+ +LF D GV ++ELD + GR++E+ LA+
Sbjct: 1 MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINI-GREIEQALAQ- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG SP VP VFI G+LVG ++VMSLHL LVPMLK AGA+WL
Sbjct: 59 LGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102
>AT4G15670.1 | chr4:8929237-8929545 FORWARD LENGTH=103
Length = 102
Score = 110 bits (276), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
ME++ K+++EK++VIF+ ++C M HT+ +LF DLGV ++ELD G+++E+ LA+
Sbjct: 1 MEKLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEIN-RGKEIEQALAQ- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG SP VP VFI G+LVG ++VMSLHL L+PMLK GA+WL
Sbjct: 59 LGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGALWL 102
>AT4G15700.1 | chr4:8937545-8937853 FORWARD LENGTH=103
Length = 102
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
ME + K+ +EK+VVIF+ ++C M HT+ +LF DLGV ++ELD G+++E LA+
Sbjct: 1 MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEIS-RGKEIEHALAQ- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG SP VP VFI G+LVG ++VMSLHL LVPMLK AGA+WL
Sbjct: 59 LGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102
>AT2G30540.1 | chr2:13011259-13011567 REVERSE LENGTH=103
Length = 102
Score = 110 bits (274), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 75/101 (74%), Gaps = 2/101 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
M++V ++S+EK VVIF+ S+C M + V LF DLGV VHE+D+DP R++E+ L R
Sbjct: 1 MDKVVRMSSEKGVVIFSKSSCCMSYAVQVLFQDLGVHPTVHEIDKDP-ECREIEKALMR- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGA 101
LG S PVPA+F+ GKL+GST+ VMSLHL+G LVP++K A
Sbjct: 59 LGCSTPVPAIFVGGKLIGSTNEVMSLHLSGSLVPLVKPFQA 99
>AT4G15660.1 | chr4:8925928-8926236 FORWARD LENGTH=103
Length = 102
Score = 109 bits (273), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
ME++ K+ +EK+VVIF+ ++C M HT+ +LF DLGV ++ELD G+++E LA+
Sbjct: 1 MEKIQKMISEKSVVIFSNNSCCMSHTIKTLFLDLGVNPTIYELDEIN-RGKEIEYALAQ- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG SP VP VFI G+LVG ++VMSLHL L+PMLK GA+WL
Sbjct: 59 LGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRFGALWL 102
>AT1G06830.1 | chr1:2097189-2097488 FORWARD LENGTH=100
Length = 99
Score = 108 bits (270), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
M++V ++S+EK VVIFT S+C + + V LF DLGV +HE+D+DP R++E+ L R
Sbjct: 1 MDKVMRMSSEKGVVIFTKSSCCLSYAVQVLFQDLGVNPKIHEIDKDP-ECREIEKALMR- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLK 97
LG S PVPAVFI GKLVGST+ VMS+HL+ LVP++K
Sbjct: 59 LGCSKPVPAVFIGGKLVGSTNEVMSMHLSSSLVPLVK 95
>AT2G47880.1 | chr2:19605124-19605432 FORWARD LENGTH=103
Length = 102
Score = 107 bits (268), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
M++V ++S+EK VVIFT S+C +C+ V LF DL V +HE+D DP R++E+ L R
Sbjct: 1 MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDP-DCREIEKALLR- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAI 102
LG S VPAVF+ GKLVGST+ VMSLHL+G LVP++K +I
Sbjct: 59 LGCSTAVPAVFVGGKLVGSTNEVMSLHLSGSLVPLIKPYQSI 100
>AT4G15680.1 | chr4:8931813-8932121 FORWARD LENGTH=103
Length = 102
Score = 107 bits (268), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
M+++ K+ +EK+VVIF+ ++C M HT+ +LF D GV ++ELD G+++E+ LA+
Sbjct: 1 MDKLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEIN-RGKEIEQALAQ- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG SP VP VFI G+LVG ++VMSLHL LVPMLK GA+WL
Sbjct: 59 LGCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102
>AT3G21460.1 | chr3:7557567-7557875 REVERSE LENGTH=103
Length = 102
Score = 107 bits (266), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
M+ VA+L++++AVVIF+ S C M H + LF + GV A+ E+D+D ++G+D+E LAR
Sbjct: 1 MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQD-MYGKDIEWALAR- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG SP VPAVF+ GK VG+ + VM+LHL G L +LK AGA+WL
Sbjct: 59 LGCSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102
>AT3G62960.1 | chr3:23268780-23269088 FORWARD LENGTH=103
Length = 102
Score = 105 bits (261), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
M++V ++S+EK VVIFT S+C +C+ V LF DL V +HE+D DP R++E+ L R
Sbjct: 1 MDKVMRMSSEKGVVIFTKSSCCLCYAVQILFRDLRVQPTIHEIDNDP-DCREIEKALV-R 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLK 97
LG + VPAVF++GKLVGST+ VMSLHL+G LVP++K
Sbjct: 59 LGCANAVPAVFVSGKLVGSTNDVMSLHLSGSLVPLIK 95
>AT5G18600.1 | chr5:6183466-6183774 REVERSE LENGTH=103
Length = 102
Score = 104 bits (260), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
M+ + K+ E+ VVI++ S+C M HT+ +L D G AV+ELD GR++E+ L R
Sbjct: 1 MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEIS-RGREIEQALLR- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG SP VP VFI G+LVG + VMSLHL G L+PMLK AGA+W+
Sbjct: 59 LGCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102
>AT3G02000.1 | chr3:332512-332922 REVERSE LENGTH=137
Length = 136
Score = 100 bits (248), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 69/107 (64%), Gaps = 6/107 (5%)
Query: 3 RVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLAR--- 59
R+ L++E AVVIF+ S C MCH V LF +GV AVHELD P +G D++R L R
Sbjct: 31 RIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHP-YGGDIQRALIRLLG 89
Query: 60 --RLGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
+P VFI GKLVG+ DRVM+ H+ G LVP+LK AGA+WL
Sbjct: 90 CSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136
>AT5G14070.1 | chr5:4541915-4542337 FORWARD LENGTH=141
Length = 140
Score = 100 bits (248), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 8/111 (7%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
+ ++ ++ E AVVIF+ S C MCH + LF +GV AVHELD P +G ++ R L R
Sbjct: 31 LAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLP-YGVEIHRALLRL 89
Query: 61 LGRSP-------PVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG S +P VFI GK+VG+ +RVM+ H+ G LVP+LK AGA+WL
Sbjct: 90 LGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140
>AT1G03020.1 | chr1:698207-698515 REVERSE LENGTH=103
Length = 102
Score = 88.6 bits (218), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 69/104 (66%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
ME+++ L +K VVIF+ ++C M H++ SL S G + V+ELD + +G ++ER L
Sbjct: 1 MEKISNLLEDKPVVIFSKTSCCMSHSIKSLISGYGANSTVYELD-EMSNGPEIERALVE- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
LG P VPAVFI +LVG +++MSL + +L +L+ AGAIW+
Sbjct: 59 LGCKPTVPAVFIGQELVGGANQLMSLQVRNQLASLLRRAGAIWI 102
>AT3G62930.1 | chr3:23261538-23261846 REVERSE LENGTH=103
Length = 102
Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Query: 1 MERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARR 60
ME V L +K VVIF+ S+C M H++ +L S G V+ELD+ +G+++E+ L +
Sbjct: 1 MESVRSLVEDKPVVIFSKSSCCMSHSIQTLISGFGAKMTVYELDQFS-NGQEIEKALVQ- 58
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
+G P VPAVFI + +G ++VM+L + +L ML+ AGAIW+
Sbjct: 59 MGCKPSVPAVFIGQQFIGGANQVMTLQVKNQLAAMLRRAGAIWV 102
>AT1G28480.1 | chr1:10013634-10014047 REVERSE LENGTH=138
Length = 137
Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 2 ERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELD--RDPLHGRDMERDLAR 59
ERV + E AV++ C MCH V L LGV AV E+D R+ ++E +
Sbjct: 33 ERVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQ 92
Query: 60 RLGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
G + +PAV++ G+L G DRVM+ H++G+LVP+LK GA+WL
Sbjct: 93 GGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGALWL 137
>AT4G33040.1 | chr4:15940779-15941213 REVERSE LENGTH=145
Length = 144
Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 3 RVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHG--RDMERDLARR 60
++ +L +E V+IF+ S+C MCH + L + +GV V ELD + ++ + +
Sbjct: 41 KIRRLISEHPVIIFSRSSCCMCHVMKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGG 100
Query: 61 LGRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIWL 104
+ P PAVFI + VG + +++LHL+G+LVP L GA+W+
Sbjct: 101 VSVVGPPPAVFIGRECVGGLESLVALHLSGQLVPKLVQVGALWV 144
>AT5G63030.1 | chr5:25286352-25287517 FORWARD LENGTH=126
Length = 125
Score = 66.2 bits (160), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 13 VVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARRLGRSPPVPAVFI 72
VV+F+ + C C V L + LG V ELD + G +++ L+ G++ VP VFI
Sbjct: 31 VVVFSKTYCGYCQRVKQLLTQLGATFKVLELD-EMSDGGEIQSALSEWTGQTT-VPNVFI 88
Query: 73 AGKLVGSTDRVMSLHLAGKLVPMLKAAGAI 102
G +G DRVM + GKLVP+L AGAI
Sbjct: 89 KGNHIGGCDRVMETNKQGKLVPLLTEAGAI 118
>AT5G11930.1 | chr5:3845165-3845611 REVERSE LENGTH=149
Length = 148
Score = 61.6 bits (148), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 3 RVAKLSTEKAVVIFT-ASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARRL 61
++ +L +E V+IFT S+C MCH + L S +GV V E+D + +E
Sbjct: 57 KIGRLISEHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLAVE------- 109
Query: 62 GRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGAIW 103
P +FI G VG + +++LHL+G+L+P L GA+W
Sbjct: 110 ----AAPVLFIGGTCVGGFESLVALHLSGQLIPRLVEVGALW 147
>AT5G40370.2 | chr5:16147826-16148900 REVERSE LENGTH=137
Length = 136
Score = 58.5 bits (140), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 15 IFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARRLGRSPPVPAVFIAG 74
I + + CP C V L LG ELD + G ++ LA G+ VP VFI G
Sbjct: 42 ICSKTYCPYCVRVKELLQQLGAKFKAVELDTES-DGSQIQSGLAEWTGQRT-VPNVFIGG 99
Query: 75 KLVGSTDRVMSLHLAGKLVPMLKAAGAI 102
+G D +LH GKLVP+L AGAI
Sbjct: 100 NHIGGCDATSNLHKDGKLVPLLTEAGAI 127
>AT4G28730.1 | chr4:14199174-14200712 FORWARD LENGTH=175
Length = 174
Score = 58.2 bits (139), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 2 ERVAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARRL 61
E + K TE VVI++ + C C V +LF LGV V ELD+ G +++ L R
Sbjct: 71 ESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLT 130
Query: 62 GRSPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAGA 101
G+ VP VF+ GK +G + L+ G L ML A
Sbjct: 131 GQH-TVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEANG 169
>AT5G20500.1 | chr5:6938652-6939665 FORWARD LENGTH=136
Length = 135
Score = 52.4 bits (124), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 4 VAKLSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHELDRDPLHGRDMERDLARRLGR 63
V K + +VIF+ S CP C S+F +L V ELD G ++ L +GR
Sbjct: 35 VKKTISSHKIVIFSKSYCPYCKKAKSVFRELDQVPYVVELDERE-DGWSIQTALGEIVGR 93
Query: 64 SPPVPAVFIAGKLVGSTDRVMSLHLAGKLVPMLKAAG 100
VP VFI GK +G +D + + +G+L +L +G
Sbjct: 94 R-TVPQVFINGKHLGGSDDTVDAYESGELAKLLGVSG 129
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,968,573
Number of extensions: 68337
Number of successful extensions: 292
Number of sequences better than 1.0e-05: 24
Number of HSP's gapped: 272
Number of HSP's successfully gapped: 24
Length of query: 104
Length of database: 11,106,569
Length adjustment: 74
Effective length of query: 30
Effective length of database: 9,077,785
Effective search space: 272333550
Effective search space used: 272333550
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 104 (44.7 bits)