BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0528100 Os12g0528100|Os12g0528100
(822 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18980.1 | chr5:6334944-6337943 REVERSE LENGTH=836 580 e-166
AT3G06210.1 | chr3:1880093-1883317 FORWARD LENGTH=841 559 e-159
AT4G14280.1 | chr4:8222518-8225074 FORWARD LENGTH=799 512 e-145
>AT5G18980.1 | chr5:6334944-6337943 REVERSE LENGTH=836
Length = 835
Score = 580 bits (1496), Expect = e-166, Method: Compositional matrix adjust.
Identities = 342/777 (44%), Positives = 444/777 (57%), Gaps = 64/777 (8%)
Query: 89 PERRLTMLALRLAILEKAASGLGALGFIWATVVLLGGFAITLGRVDFWSVTVILLVEGAR 148
PE++LT+ AL+LAILEK A+G+G LGFIWATVVLLGGFAITL DFW +T+ILL+EGAR
Sbjct: 70 PEKKLTLFALQLAILEKTATGIGTLGFIWATVVLLGGFAITLDGSDFWFITIILLIEGAR 129
Query: 149 IFSRSHELEWQHQATWSLAAAGRSSFRLVARSFRFVFHLXXXXXXX-------XXXXXXX 201
IFSRSHELEWQHQATW++A G SSFR + S +F
Sbjct: 130 IFSRSHELEWQHQATWTVAGVGISSFRALRSSSASLFKNLKRISDSIFKPRSREATARDC 189
Query: 202 XXPRMGRRRWRIS---------WSFLSRHVGRVFYWLQLXXXXXXXXXXXXRLAGQDFGE 252
P W+ S W F+S V R+ YWLQL +L ++G+
Sbjct: 190 VVPETTLETWKNSDVPLLPYARWFFISSTVSRLLYWLQLLSATACVALSSYKLIRHNYGD 249
Query: 253 AEDART---NRRSALDIFYGXXXXXXXXXXXXXXXWEWEVSYGRLLQRVAGECHLAGEPG 309
T NR+SAL+IFY WEW+VS LL+ V EC G G
Sbjct: 250 VHKGDTDKRNRQSALNIFYSLAFAEALLFLVEKVYWEWQVSVCNLLENVTRECEF-GVSG 308
Query: 310 LVAVRRFFYDAYSRCVDGSIFDGLRMDLVSFAEELLVGGSHDEQRIGVGILVNVAANPRL 369
LV+++RFFYD+YS+CV+GSIFDGL+MD+VSF ELL S DEQ IGV IL + R
Sbjct: 309 LVSIKRFFYDSYSKCVNGSIFDGLKMDIVSFGMELLNSNSSDEQLIGVRILRQFSVTERY 368
Query: 370 GEAALRRVGTSAAVVDRLVEMLTWSGGXXXXXXXXXXXXXXXXXXXXXRNALRVAGVPGA 429
E L ++G + V++RLVEML W +N+LRVAG+ GA
Sbjct: 369 SEDTLEKIGINFPVIERLVEMLNWKD-LQEEEIRRSAAEILSKLAGKKQNSLRVAGISGA 427
Query: 430 IESVSSLLY------AAGDE-----------------ECNLLGLLIIKKLARDHDNCSKI 466
+ES+SSLL A DE N LGLLI+KKLA+DHDNC K+
Sbjct: 428 MESISSLLENTRSSGEAPDEIGEKKVFHDHNLHYDFWRFNNLGLLILKKLAKDHDNCGKL 487
Query: 467 GNARGLLDKIIDFSAIGGG------AVITPSRAKAVKRSLQVVKMLAETTGSTGKLLRRE 520
GN RGLL KIIDF+ A I SR +KRSLQ+VKMLA TTG+TGK LRRE
Sbjct: 488 GNTRGLLPKIIDFTHADENLLRDENADIARSRVLTLKRSLQLVKMLASTTGNTGKCLRRE 547
Query: 521 VAEIVFTVSNIRAVLQHGAGHLELQRLGAEVLTRLAMDADAREKIGGTGGVVSLLLAMFL 580
++EIVFTVSN+R VL+HGA + +LQ+LG +LT LA++A+ARE+IGGTGGV+ L +F
Sbjct: 548 ISEIVFTVSNVRDVLKHGARYPKLQKLGIGILTNLALEAEARERIGGTGGVLKELFNIFF 607
Query: 581 QPSIT-DEGD--AARVEAGEALAMLALDSRRNCDRILRXXXXXXXXTVARLVDALTDDEA 637
+ DEG+ R+ AGEA+AML L+S+ NC +LR + RLV+AL
Sbjct: 608 KRETRGDEGNEGCVRIAAGEAIAMLVLESKSNCLHVLR------LGVMGRLVEALEVPSI 661
Query: 638 GIGAARILTNLCAYAGGEWFSDLHLVTSGAATALRNVMTTKKSKLLEVSLGLVAQMARFM 697
+ AAR+L N+C Y+G E F DL V + A T L+++ T++ +KL EV +GL AQ+ RFM
Sbjct: 662 RVNAARVLRNMCLYSGDECFHDLKFVKAAAPTVLKSI-TSEDNKLQEVMVGLAAQVFRFM 720
Query: 698 GPHELSHHXXXXXXXXXXXXXXXXXXXXXXXYGSPSIRVPRIRRFAVELAVAMMTEXXXX 757
E S+ P+I+VPRIRRF +ELA+ MM +
Sbjct: 721 SSKESSY--VFMYSGIKRQELANSLVSILKKNDKPAIKVPRIRRFVIELAIWMMEDDELE 778
Query: 758 XXXXXXXXXXXXXXPVLRRVAETTSELECFHVFSGSAGLSRHAVSLSALVDTALELM 814
L +V ETT+ELE F VFSG+ GLSRH+ ++ +L + ALE++
Sbjct: 779 DNVALFREMGLEKE--LEKVLETTAELENFDVFSGTVGLSRHSRTVHSLAELALEIL 833
>AT3G06210.1 | chr3:1880093-1883317 FORWARD LENGTH=841
Length = 840
Score = 559 bits (1440), Expect = e-159, Method: Compositional matrix adjust.
Identities = 332/783 (42%), Positives = 443/783 (56%), Gaps = 72/783 (9%)
Query: 89 PERRLTMLALRLAILEKAASGLGALGFIWATVVLLGGFAITLGRVDFWSVTVILLVEGAR 148
PE++LT+ ALRLAI+EK A+ LG LGFIWATVVLLGGFAITL + DFW +T+ILL+EG R
Sbjct: 68 PEQKLTLFALRLAIIEKIATNLGTLGFIWATVVLLGGFAITLEKSDFWFITIILLIEGTR 127
Query: 149 IFSRSHELEWQHQATWSLAAAGRSSFR-LVARSFRFVFHLXXXX----XXXXXXXXXXXX 203
IFSRSHELEWQHQATW+++ G SSFR L + S + +L
Sbjct: 128 IFSRSHELEWQHQATWTVSGVGISSFRVLQSSSISLLRNLKRISDGIFKPILDNGLREAT 187
Query: 204 PRMGRRR---------WRIS---------WSFLSRHVGRVFYWLQLXXXXXXXXXXXXRL 245
R+GR+ W+ S W ++S +V R+ YWLQL +L
Sbjct: 188 TRIGRQEIFDRRTTLTWKNSEVPLLPYARWLYISSYVSRILYWLQLLSASACVALSSYKL 247
Query: 246 AGQDFGEAEDA---RTNRRSALDIFYGXXXXXXXXXXXXXXXWEWEVSYGRLLQRVAGEC 302
++G+ +D + NR++AL IFY WEWEVS LL+ V EC
Sbjct: 248 VMHNYGDVQDGDLDKRNRQAALSIFYSLALAEALLFLAEKAYWEWEVSVCHLLENVTREC 307
Query: 303 HLAGEPGLVAVRRFFYDAYSRCVDGSIFDGLRMDLVSFAEELLVGGSHDEQRIGVGILVN 362
G G+V+++RFFYDAYS+ V+GSIFDG++MD+VSFA +LL DEQ IG IL
Sbjct: 308 GF-GVTGMVSIKRFFYDAYSKSVNGSIFDGVKMDMVSFAMDLLGSNCSDEQLIGARILRQ 366
Query: 363 VAANPRLGEAALRRVGTSAAVVDRLVEMLTWSGGXXXXXXXXXXXXXXXXXXXXXRNALR 422
A N R E L ++G + V++RLVEML W +N+LR
Sbjct: 367 FAVNERFAEDTLEKIGINLPVIERLVEMLNWKD-LQEEEIRRSAAEILSKLAGKKQNSLR 425
Query: 423 VAGVPGAIESVSSLLY------AAGDE-----------------ECNLLGLLIIKKLARD 459
VAG+ GA+ES+SSLL A DE N LGLLI+KKL+RD
Sbjct: 426 VAGISGAMESISSLLQNTRSLGEAPDEIGEKKLFHDHHLHYDFWRFNNLGLLILKKLSRD 485
Query: 460 HDNCSKIGNARGLLDKIIDFSAIGG------GAVITPSRAKAVKRSLQVVKMLAETTGST 513
HDNC KIGN RGLL KIIDF+ A + SR VKRSLQ+VKML T+G+T
Sbjct: 486 HDNCGKIGNTRGLLPKIIDFTHTDATLLKDENADMVLSRVLTVKRSLQLVKMLVSTSGNT 545
Query: 514 GKLLRREVAEIVFTVSNIRAVLQHGAGHLELQRLGAEVLTRLAMDADAREKIGGTGGVVS 573
GK LRRE++EIVFT+SN+R VL+HG + +LQ+LG E+L+ LA++ D RE+I TGGV+
Sbjct: 546 GKCLRREISEIVFTISNLRDVLRHGVRYPKLQKLGIEILSFLALETDGRERIAVTGGVLK 605
Query: 574 LLLAMFLQPSITDEGDAARVE--AGEALAMLALDSRRNCDRILRXXXXXXXXTVARLVDA 631
L ++FL+ I + + RV AGEA+ MLAL+SR NC +IL+ RLV+A
Sbjct: 606 ELFSIFLKSKIHGDENEKRVRMAAGEAIGMLALESRSNCIQILK------LGVFGRLVEA 659
Query: 632 LTDDEAGIGAARILTNLCAYAGGEWFSDLHLVTSGAATALRNVMTTKKSKLLEVSLGLVA 691
L + AAR+L NLC Y+G E F DL + + A T L+++ T+ +KLLEV LGL A
Sbjct: 660 LEVPLIRVNAARVLRNLCIYSGHECFLDLRFIKTAAPTVLKSI-TSGDNKLLEVMLGLAA 718
Query: 692 QMARFMGPHELSHHXXXXXXXXXXXXXXXXXXXXXXXYGSPSIRVPRIRRFAVELAVAMM 751
Q+ +FM E + + P+I+VPRIRRF +ELA+ MM
Sbjct: 719 QVFKFMSSEE--ANIVLTDSGIKKQELANSLVSILKKHDKPAIKVPRIRRFVIELAIWMM 776
Query: 752 TEXXXXXXXXXXXXXXXXXXPVLRRVAETTSELECFHVFSGSAGLSRHAVSLSALVDTAL 811
+ VL ETT+ELE F VFSG+ G+SR + ++ L + AL
Sbjct: 777 EDDVENVGMFRDLGMEKELVKVL----ETTAELENFDVFSGTVGVSRQSRTVHWLAELAL 832
Query: 812 ELM 814
+++
Sbjct: 833 KML 835
>AT4G14280.1 | chr4:8222518-8225074 FORWARD LENGTH=799
Length = 798
Score = 512 bits (1318), Expect = e-145, Method: Compositional matrix adjust.
Identities = 316/772 (40%), Positives = 422/772 (54%), Gaps = 62/772 (8%)
Query: 89 PERRLTMLALRLAILEKAASGLGALGFIWATVVLLGGFAITLGRVDFWSVTVILLVEGAR 148
PE++LT+ ALRLA+LEK ASGLG+LGF+WATVVLLGGFA +L DFW VTVIL++EGAR
Sbjct: 42 PEKKLTLFALRLAVLEKIASGLGSLGFVWATVVLLGGFAGSLEITDFWFVTVILVIEGAR 101
Query: 149 IFSRSHELEWQHQATWSLAAAGRSSFRLVARSFRFVFHLXXXXXXXXXXXXXXXXPRMGR 208
+FSRSHELE QHQ+ ++++ G + FR + + +FH + R
Sbjct: 102 LFSRSHELELQHQSKYTIS--GINIFRFLVKQINQIFHQVAHIAGDDNRPSVRETRTVQR 159
Query: 209 --------RRWRIS---------WSFLSRHVGRVFYWLQLXXXXXXXXXXXXRLAGQDFG 251
R W+ S W F+SR+V R+FYWLQ+ +L QD+G
Sbjct: 160 NSGHITRTRTWKSSDVPMLPYTGWVFVSRNVSRIFYWLQIASAFASIFISTIQLIKQDYG 219
Query: 252 --EAEDARTNRRSALDIFYGXXXXXXXXXXXXXXXWEWEVSYGRLLQRVAGECHLAGEPG 309
+ + TN +AL +FY WE+ +S +L++V EC L G
Sbjct: 220 GNDLKPKSTNLHAALTLFYSLALAEALLFLVEKAYWEYMISVIHILEKVNEECGLE-RFG 278
Query: 310 LVAVRRFFYDAYSRCVDGSIFDGLRMDLVSFAEELLVGGSHDEQRIGVGILVNVAANPRL 369
+VRRFFYDAYSRC++GSIFDGL+MD+V FA ELLV S DEQ IG IL + +
Sbjct: 279 TGSVRRFFYDAYSRCLNGSIFDGLKMDMVIFAMELLVANSLDEQLIGAEILSIFSTHDDY 338
Query: 370 GEAALRRVGTSAAVVDRLVEMLTWSGGXXXXXXXXXXXXXXXXXXXXXRNALRVAGVPGA 429
L+++GT+ A+++RLVEML W +N+LRVAG+PGA
Sbjct: 339 SVDTLQKIGTNLAIIERLVEMLNWRD-KNQEDVRMSAAEILSRLASKKQNSLRVAGIPGA 397
Query: 430 IESVSSLLYA------AGDE------------ECNLLGLLIIKKLARDHDNCSKIGNARG 471
IES+SSLL + A DE N LGLLI+K+LARDH+NC KIG +G
Sbjct: 398 IESISSLLESTRDSGEATDEIGEQSINHSNLWTLNNLGLLILKRLARDHENCGKIGKTKG 457
Query: 472 LLDKIIDFSAIGGG-------AVITPSRAKAVKRSLQVVKMLAETTGSTGKLLRREVAEI 524
LL KIIDF+ AV P + AVKRSL+++K L TTG+TGK LR ++ I
Sbjct: 458 LLSKIIDFTYAEKNLLENPNVAVAEPYKILAVKRSLKLLKKLVSTTGTTGKNLRMTISGI 517
Query: 525 VFTVSNIRAVLQHGAGHLELQRLGAEVLTRLAMDADAREKIGGTGGVVSLLLAMFLQPSI 584
VFTVSNIR L HG LQ+LGAE+LT LA + A EKIGGTGGV+ LL +FL I
Sbjct: 518 VFTVSNIRETLHHGKSQPHLQKLGAEILTFLAFEEGATEKIGGTGGVLKGLLCIFLNNEI 577
Query: 585 TDEGDAARVEAGEALAMLALDSRRNCDRILRXXXXXXXXTVARLVDALTDDEAGIGAARI 644
+ RV AGE++AMLA S+ NC +ILR + LV+AL + + AARI
Sbjct: 578 PKDKSGVRVSAGESVAMLAQGSKSNCQKILR------ANVLKGLVEALDNPLIRLNAARI 631
Query: 645 LTNLCAY-AGGEWFSDLHLVTSGAATALRNVMTTKKSKLLEVSLGLVAQMARFMG-PHEL 702
L NLCAY A G++ + V A + + +++ K EV +GL + + M P EL
Sbjct: 632 LRNLCAYTAPGQFNEQMKEVIKSAGATVLKAIKSEERKPQEVMVGLAPHILKLMNTPEEL 691
Query: 703 SHHXXXXXXXXXXXXXXXXXXXXXXXYGSPSIRVPRIRRFAVELAVAMMTEXXXXXXXXX 762
Y P +VPRIRRFA+EL +AMM
Sbjct: 692 --RGMFEEAGVTEEELAKALINILKRYEQPVPKVPRIRRFAIELTIAMMKANVETVKTFQ 749
Query: 763 XXXXXXXXXPVLRRVAETTSELECFHVFSGSAGLSRHAVSLSALVDTALELM 814
L V ET +ELE F +FSG+ GL+RH +++ L++ A+ L+
Sbjct: 750 NLEMKNE----LETVFETAAELENFDIFSGTVGLARHGSTINELIEEAMLLL 797
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,514,961
Number of extensions: 401649
Number of successful extensions: 833
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 802
Number of HSP's successfully gapped: 4
Length of query: 822
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 715
Effective length of database: 8,173,057
Effective search space: 5843735755
Effective search space used: 5843735755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 116 (49.3 bits)