BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0503000 Os12g0503000|AK069916
(418 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G03530.1 | chr2:1071951-1073522 FORWARD LENGTH=399 474 e-134
AT2G03590.1 | chr2:1095129-1096711 FORWARD LENGTH=391 457 e-129
AT1G26440.3 | chr1:9144109-9145673 REVERSE LENGTH=414 449 e-126
AT2G03520.1 | chr2:1069494-1071269 FORWARD LENGTH=402 442 e-124
AT2G03600.4 | chr2:1097294-1098633 FORWARD LENGTH=341 341 3e-94
>AT2G03530.1 | chr2:1071951-1073522 FORWARD LENGTH=399
Length = 398
Score = 474 bits (1221), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/418 (57%), Positives = 292/418 (69%), Gaps = 22/418 (5%)
Query: 1 MYLVKDIGGAIALMGVSLVLLGTWPVVLAVLERRGRLPQHTYLDYSITNFLAALLVAFTF 60
MYLV+ GGAIA M ++L+ LGTWP VL +LERRGRLPQHTYLDYSITN LAA+++AFTF
Sbjct: 1 MYLVESKGGAIACMLLALLSLGTWPAVLTLLERRGRLPQHTYLDYSITNLLAAIIIAFTF 60
Query: 61 GQIGADTPETPNFLTQLTQMQDNWPSILFAMSGGIFNGLGTLATQYGWAFVGLSVTEVMA 120
GQIG+ P++PNF+TQL Q DNWPS++FAM+GGI LG L+TQY WA VGLSVTEV+
Sbjct: 61 GQIGSTKPDSPNFITQLAQ--DNWPSVMFAMAGGIVLSLGNLSTQYAWALVGLSVTEVIT 118
Query: 121 SSLKVVIGTTLNYFLDGRINKAEILFPGVGCFLIAACLGSLVHSSNAADNQEKLSSAMVN 180
SS+ VVIG+TLNYFLD +INKAEILFPGV CFLIA CLGS VH SNA DN+ KL
Sbjct: 119 SSITVVIGSTLNYFLDDKINKAEILFPGVACFLIAVCLGSAVHRSNADDNKAKLR----- 173
Query: 181 HSNTNGDTENEELTKHLLEI--EQPKDCXXXXXXXXXXXXXXXKLEAGTADFLVDLEGKR 238
+ +T +E + EI KD K + GTA FL++LE R
Sbjct: 174 ----DFETAKQEASGPSTEIGTNSSKD---------LETNVTTKPKEGTARFLIELENTR 220
Query: 239 SIKVLGSNTFLGLGIVTFAGVSYSLFSPAFNLATNDQWHTLGEGVPHMVVYTAFFYFSLA 298
+IKV G +GL I FAG+ +SLFSPAFNLATNDQW+ L +GVP +VVYTAFFYFS++
Sbjct: 221 AIKVFGKRKIIGLAITFFAGLCFSLFSPAFNLATNDQWNRLKQGVPKLVVYTAFFYFSVS 280
Query: 299 CFAIGIALNIWFLYHPMVGVPRSSLTAYLKDWKGRDLALVAGMVCGLXXXXXXXXXXXXX 358
CF I + LN+ FLY+P++G+P+SS AYL DW GR A +AG +CG
Sbjct: 281 CFIIALILNVVFLYYPVLGLPKSSFKAYLNDWNGRYWAFLAGFLCGFGNGLQFMGGQAAG 340
Query: 359 XXXXXXXXXLPLVSTVWGIVLFGEYRRSSRRTYTLLGSMLFMFVVAMVILMASSAHRR 416
LPLVST WG+VLFGEYRRSSR+TY LL MLFMF+ A+ +LMASS HR+
Sbjct: 341 YAAADSVQALPLVSTFWGVVLFGEYRRSSRKTYLLLFCMLFMFISAVAVLMASSGHRK 398
>AT2G03590.1 | chr2:1095129-1096711 FORWARD LENGTH=391
Length = 390
Score = 457 bits (1176), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/416 (54%), Positives = 287/416 (68%), Gaps = 26/416 (6%)
Query: 1 MYLVKDIGGAIALMGVSLVLLGTWPVVLAVLERRGRLPQHTYLDYSITNFLAALLVAFTF 60
MY+++ GGAIA M ++L+ LGTWP ++ + ERRGRLPQHTYLDY++TN LAA+++A T
Sbjct: 1 MYMIESKGGAIACMLLALLFLGTWPAIMTLTERRGRLPQHTYLDYTLTNLLAAVIIALTL 60
Query: 61 GQIGADTPETPNFLTQLTQMQDNWPSILFAMSGGIFNGLGTLATQYGWAFVGLSVTEVMA 120
G+IG P PNF TQL+Q DNW S++FAM+GGI LG LATQY WA+VGLSVTEV+
Sbjct: 61 GEIG---PSRPNFFTQLSQ--DNWQSVMFAMAGGIVLSLGNLATQYAWAYVGLSVTEVIT 115
Query: 121 SSLKVVIGTTLNYFLDGRINKAEILFPGVGCFLIAACLGSLVHSSNAADNQEKLSSAMVN 180
+S+ VVIGTTLNYFLD RIN+AE+LFPGV CFLIA C GS VH SNAADN+ KL +
Sbjct: 116 ASITVVIGTTLNYFLDDRINRAEVLFPGVACFLIAVCFGSAVHKSNAADNKTKLQNFKSL 175
Query: 181 HSNTNGDTENEELTKHLLEIEQPKDCXXXXXXXXXXXXXXXKLEAGTADFLVDLEGKRSI 240
+ ++ + E + L + K + GTA FL++LE +R+I
Sbjct: 176 ETTSSFEMETISASNGLTK---------------------GKAKEGTAAFLIELEKQRAI 214
Query: 241 KVLGSNTFLGLGIVTFAGVSYSLFSPAFNLATNDQWHTLGEGVPHMVVYTAFFYFSLACF 300
KV G +T +GL I FAG+ +SLFSPAFNLATNDQWHTL GVP + VYTAFFYFS++ F
Sbjct: 215 KVFGKSTIIGLVITFFAGICFSLFSPAFNLATNDQWHTLKHGVPKLNVYTAFFYFSISAF 274
Query: 301 AIGIALNIWFLYHPMVGVPRSSLTAYLKDWKGRDLALVAGMVCGLXXXXXXXXXXXXXXX 360
+ + LNI FLY P++G+PRSS AYL DW GR + +AG +CG
Sbjct: 275 VVALILNIRFLYWPILGLPRSSFKAYLNDWNGRGWSFLAGFLCGFGNGLQFMGGQAAGYA 334
Query: 361 XXXXXXXLPLVSTVWGIVLFGEYRRSSRRTYTLLGSMLFMFVVAMVILMASSAHRR 416
LPLVST WGI+LFGEYRRSSR+TYTLL SML MF+VA+ +LMASS HR+
Sbjct: 335 AADAVQALPLVSTFWGILLFGEYRRSSRKTYTLLISMLLMFIVAVAVLMASSGHRK 390
>AT1G26440.3 | chr1:9144109-9145673 REVERSE LENGTH=414
Length = 413
Score = 449 bits (1154), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/418 (55%), Positives = 286/418 (68%), Gaps = 19/418 (4%)
Query: 1 MYLVKDIGGAIALMGVSLVLLGTWPVVLAVLERRGRLPQHTYLDYSITNFLAALLVAFTF 60
+Y+V+ GGAI + +SL+ LGTWP ++A+LERRGRLPQHTYLDYSITNFLAA+ +AF F
Sbjct: 9 IYVVESKGGAILCLLLSLLCLGTWPALMALLERRGRLPQHTYLDYSITNFLAAIFIAFVF 68
Query: 61 GQIGADTPETPNFLTQLTQMQDNWPSILFAMSGGIFNGLGTLATQYGWAFVGLSVTEVMA 120
G IG T E P+F+TQLTQ+QDNWPS+LFAM+GG+ +G LATQY AFVGLSVTEV A
Sbjct: 69 GGIGESTHEAPSFITQLTQIQDNWPSVLFAMAGGVGLSIGNLATQYSLAFVGLSVTEVTA 128
Query: 121 SSLKVVIGTTLNYFLDGRINKAEILFPGVGCFLIAACLGSLVHSSNAADNQEKLSSAMVN 180
+S+ VV+GTT+NYFLD +N+A+ILF GVGCF++A CLGS VHSSN+AD + KL
Sbjct: 129 ASITVVVGTTVNYFLDNGLNRADILFSGVGCFMVAVCLGSAVHSSNSADIKAKL------ 182
Query: 181 HSNTNGDTENEELTKHLLEIEQPKDCXXX--XXXXXXXXXXXXKLEAGTADFLVDLEGKR 238
+GD E P++C ++ G+A FL+ LE KR
Sbjct: 183 -GKLSGDCET----------VTPEECQRLFGVEEEEEEEKEMENVKEGSAAFLIALENKR 231
Query: 239 SIKVLGSNTFLGLGIVTFAGVSYSLFSPAFNLATNDQWHTLGEGVPHMVVYTAFFYFSLA 298
+IKVLG + +GLGI FAG+S+SLFSP FNLATNDQWHTL +GVP ++VYTAFFYFSL+
Sbjct: 232 AIKVLGKSMVVGLGITFFAGLSFSLFSPLFNLATNDQWHTLKQGVPKLIVYTAFFYFSLS 291
Query: 299 CFAIGIALNIWFLYHPMVGVPRSSLTAYLKDWKGRDLALVAGMVCGLXXXXXXXXXXXXX 358
CF I +ALNI FLY P++ PRSS YL DW GR AL AG++CG
Sbjct: 292 CFVIAVALNISFLYKPVLDSPRSSFREYLSDWNGRGWALAAGLLCGFGNGLQFMGGQAAG 351
Query: 359 XXXXXXXXXLPLVSTVWGIVLFGEYRRSSRRTYTLLGSMLFMFVVAMVILMASSAHRR 416
LPLVST WGI LFGEYRRSS RTY LL ML MF VA+ +LMAS+ R
Sbjct: 352 YAASDAVQALPLVSTFWGIYLFGEYRRSSTRTYALLVGMLVMFTVAVGLLMASAGERE 409
>AT2G03520.1 | chr2:1069494-1071269 FORWARD LENGTH=402
Length = 401
Score = 442 bits (1137), Expect = e-124, Method: Compositional matrix adjust.
Identities = 231/418 (55%), Positives = 285/418 (68%), Gaps = 19/418 (4%)
Query: 1 MYLVKDIGGAIALMGVSLVLLGTWPVVLAVLERRGRLPQHTYLDYSITNFLAALLVAFTF 60
MY+V+ GAI M +SL LG+WP +L +LERRGRLPQHT+LD++ N LAA+++AF+
Sbjct: 1 MYVVESKAGAIGCMILSLCCLGSWPAILTLLERRGRLPQHTFLDFATANLLAAIVIAFSL 60
Query: 61 GQIGADTPETPNFLTQLTQMQDNWPSILFAMSGGIFNGLGTLATQYGWAFVGLSVTEVMA 120
G+IG T P+F TQL Q DNWPS+L A++GG+ +G LATQY +AFVGLSVTEV+
Sbjct: 61 GEIGKSTFLKPDFTTQLPQ--DNWPSVLLAVAGGVLLSIGNLATQYAFAFVGLSVTEVIT 118
Query: 121 SSLKVVIGTTLNYFLDGRINKAEILFPGVGCFLIAACLGSLVHSSNAADNQEKLSSAMVN 180
+S+ VVIGTTLNYFLD +INKAEILFPGVGCFLIA LG+ VH+SNAAD +EKL S
Sbjct: 119 ASITVVIGTTLNYFLDNKINKAEILFPGVGCFLIAVFLGAAVHASNAADVKEKLKSLPSE 178
Query: 181 --HSNTNGDTENEELTKHLLEIEQPKDCXXXXXXXXXXXXXXXKLEAGTADFLVDLEGKR 238
+S+ + E+ K +E ++ K +AGTA F V+LE KR
Sbjct: 179 DLYSSIENGEDKPEIEKTDVESQEK---------------LAEKAKAGTAGFYVELENKR 223
Query: 239 SIKVLGSNTFLGLGIVTFAGVSYSLFSPAFNLATNDQWHTLGEGVPHMVVYTAFFYFSLA 298
+IKV G + +GL I FAG+S SLFSPAFNLATNDQW TL +GVP +VVYTAFFYFS+A
Sbjct: 224 AIKVFGKSIMIGLFITLFAGISLSLFSPAFNLATNDQWSTLPKGVPKLVVYTAFFYFSIA 283
Query: 299 CFAIGIALNIWFLYHPMVGVPRSSLTAYLKDWKGRDLALVAGMVCGLXXXXXXXXXXXXX 358
F I + LN+ FLY PMVG+ RSSL Y+ D KGR A+ AG +CG
Sbjct: 284 GFLISLILNLIFLYRPMVGLARSSLKKYIYDSKGRGWAVFAGFLCGFGNGLQFMGGQAAG 343
Query: 359 XXXXXXXXXLPLVSTVWGIVLFGEYRRSSRRTYTLLGSMLFMFVVAMVILMASSAHRR 416
LPLVST WGIVLFGEYR+SS+RTY LL SML MFV A+ ILMASS HR+
Sbjct: 344 YAAADSVQALPLVSTFWGIVLFGEYRKSSKRTYALLVSMLAMFVAAVAILMASSGHRK 401
>AT2G03600.4 | chr2:1097294-1098633 FORWARD LENGTH=341
Length = 340
Score = 341 bits (875), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 232/351 (66%), Gaps = 39/351 (11%)
Query: 1 MYLVKDIGGAIALMGVSLVLLGTWPVVLAVLERRGRLPQHTYLDYSITNFLAALLVAFTF 60
MY+++ GG I M ++L+ LGTWP ++ + ERRGRLPQHTYLDY++TN LAA+++AFT
Sbjct: 1 MYVIESKGGTITCMLLALLFLGTWPAIMTLTERRGRLPQHTYLDYTLTNLLAAVIIAFTL 60
Query: 61 GQIGADTPETPNFLTQLTQMQDNWPSILFAMSGGIFNGLGTLATQYGWAFVGLSVTEVMA 120
G+I +P PNF TQL+Q DNWPS++FAM+GGIF LGTLATQY WAFVGLSVTEV+
Sbjct: 61 GEI---SPSRPNFTTQLSQ--DNWPSVMFAMAGGIFLSLGTLATQYAWAFVGLSVTEVIT 115
Query: 121 SSLKVVIGTTLNYFLDGRINKAEILFPGVGCFLIAACLGSLVHSSNAADNQEKLSSAMVN 180
+S+ VVIGTTLNYFLD RIN+AE+LFPGV CFLIA C GS VH SNAADN+ KL
Sbjct: 116 ASIAVVIGTTLNYFLDDRINRAEVLFPGVACFLIAVCFGSAVHKSNAADNKSKL------ 169
Query: 181 HSNTNGDTENEELTKHLLEIEQPKDCXXXXXXXXXXXXXXXKLEAGTADFLVDLEGKRSI 240
G E + +E K+ K + GTADFL+++E +R+I
Sbjct: 170 ----QGFKSLETTSSFQMETSSIKE---------------GKAKVGTADFLIEVEKQRAI 210
Query: 241 KVLGSNTFLGLGIVT----FAGVSYSLFSPAFNLATND--QWHTLGEGVPHMVVYTAFFY 294
K N + G I+ + ++ S S ++A + WHTL GVP + VYTAFFY
Sbjct: 211 K---HNNWTGDNILCRYLFLSNLTCSKLSDKRSMAHFETWSWHTLKHGVPKLNVYTAFFY 267
Query: 295 FSLACFAIGIALNIWFLYHPMVGVPRSSLTAYLKDWKGRDLALVAGMVCGL 345
FS++ F +G+ LNI FLY P++G+PRSS AYL DW GR + +AG +CG
Sbjct: 268 FSISSFGVGLILNIIFLYWPILGLPRSSFKAYLNDWNGRGWSFLAGFLCGF 318
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.139 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,683,350
Number of extensions: 292127
Number of successful extensions: 910
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 894
Number of HSP's successfully gapped: 5
Length of query: 418
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 317
Effective length of database: 8,337,553
Effective search space: 2643004301
Effective search space used: 2643004301
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 113 (48.1 bits)