BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0468300 Os12g0468300|J013002C01
(242 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927 69 2e-12
AT3G46530.1 | chr3:17130739-17133246 REVERSE LENGTH=836 65 3e-11
AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848 62 2e-10
AT1G58410.1 | chr1:21701286-21704255 REVERSE LENGTH=900 57 1e-08
AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858 56 1e-08
AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848 55 3e-08
AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853 55 3e-08
AT3G14470.1 | chr3:4857940-4861104 FORWARD LENGTH=1055 54 6e-08
AT1G59218.1 | chr1:21828398-21831713 FORWARD LENGTH=1050 54 9e-08
AT1G58848.1 | chr1:21792140-21795455 FORWARD LENGTH=1050 54 9e-08
AT5G48620.1 | chr5:19717406-19720932 FORWARD LENGTH=909 54 9e-08
AT1G58400.1 | chr1:21696165-21699118 REVERSE LENGTH=901 53 1e-07
AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928 53 1e-07
AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909 50 1e-06
AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902 49 2e-06
AT1G59124.1 | chr1:21816832-21819653 FORWARD LENGTH=856 49 3e-06
AT1G58807.1 | chr1:21780574-21783793 FORWARD LENGTH=1018 49 3e-06
AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907 47 8e-06
>AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927
Length = 926
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 17/172 (9%)
Query: 27 NVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRVRYQIANKIQELKARVMEV 86
N R++AY IED +D F YH+ G+ + + R + R+ IA K+ + + +
Sbjct: 70 NTRDLAYQIEDILDEFGYHI-HGYRSCAKIWRAFHFPRYMWARHSIAQKLGMVNVMIQSI 128
Query: 87 AQRRSRYIGLGEATTSC-PKVVEIDPRL------PALYEAAKNLVGIDGPREE-ISRWLT 138
+ RY + P + + D + +L+ + +LVGID P+ + I R L+
Sbjct: 129 SDSMKRYYHSENYQAALLPPIDDGDAKWVNNISESSLFFSENSLVGIDAPKGKLIGRLLS 188
Query: 139 EEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYK--QVKDKFNCTSFLSVSKN 188
P Q VV++VG GG GKTTL+ ++K V+ F +++++SK+
Sbjct: 189 ------PEPQRIVVAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVTISKS 234
>AT3G46530.1 | chr3:17130739-17133246 REVERSE LENGTH=836
Length = 835
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Query: 15 ERLDGQQKLWRDNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRVRYQIAN 74
ER D K W V + AYD+ED +D + L + + GL + T + RK+ Y I +
Sbjct: 52 EREDEVSKEWSKLVLDFAYDVEDVLDTYHLKLEERSQRRGLRRLTNKIGRKMDA-YSIVD 110
Query: 75 KIQELKARVMEVAQRRSRY-IG-----LGEATTSCPKVVEIDPRLPALYEAAKNLVGIDG 128
I+ LK R++++ ++R Y IG G TS +V ++ R + + +VG+
Sbjct: 111 DIRILKRRILDITRKRETYGIGGLKEPQGGGNTSSLRVRQL--RRARSVDQEEVVVGL-- 166
Query: 129 PREEISRWLTEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVY--KQVKDKFNCTSFLSVS 186
E+ ++ L E+ + ++SI G GGLGKT LA ++Y + VK++F ++ VS
Sbjct: 167 --EDDAKILLEKLLDYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVS 224
Query: 187 K 187
+
Sbjct: 225 Q 225
>AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848
Length = 847
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 15/181 (8%)
Query: 15 ERLDGQQKLWRDNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRVRYQIAN 74
ER D K W V ++AYDIED +D + L + + GLL+ T KI K R Y I
Sbjct: 52 EREDEVSKEWTKLVLDIAYDIEDVLDTYFLKLEERSLRRGLLRLT-NKIGKKRDAYNIVE 110
Query: 75 KIQELKARVMEVAQRRSRY-IGL-----GEATTSCPKVVEIDPRLPALYEAAKNLVGIDG 128
I+ LK R++++ ++R + IG GE T+ +V ++ P E + G
Sbjct: 111 DIRTLKRRILDITRKRETFGIGSFNEPRGENITNV-RVRQLRRAPPVDQEEL-----VVG 164
Query: 129 PREEISRWLTEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVS 186
+++ L + + ++SI G GGLGKT LA ++Y VK +F+C ++ VS
Sbjct: 165 LEDDVKILLVKLLSDNEKDKSYIISIFGMGGLGKTALARKLYNSGDVKRRFDCRAWTYVS 224
Query: 187 K 187
+
Sbjct: 225 Q 225
>AT1G58410.1 | chr1:21701286-21704255 REVERSE LENGTH=900
Length = 899
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRVRYQIANKIQELKARVME 85
+ ++++ YD ED I+ F+ K G++++ R + R ++A+ I + R+ +
Sbjct: 61 EEIKDIVYDTEDIIETFILK-EKVEMKRGIMKRIKRFASTIMDRRELASDIGGISKRISK 119
Query: 86 VAQRRSRY-----IGLGEATTSCPKVVEIDPRLPALYEAAKNLVGIDGPREEISRWLTEE 140
V Q + I G ++ + + + R ++ + VG++ +++ +L E+
Sbjct: 120 VIQDMQSFGVQQIITDGSRSSHPLQERQREMRHTFSRDSENDFVGMEANVKKLVGYLVEK 179
Query: 141 GQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSK 187
++VS+ G GGLGKTTLA QV+ VKD+F+ +++SVS+
Sbjct: 180 ------DDYQIVSLTGMGGLGKTTLARQVFNHDVVKDRFDGFAWVSVSQ 222
>AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858
Length = 857
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 24 WRDNVREMAYDIEDCIDVFMYHLGDGHNKDGL---LQKTARKIRKLRVRYQIANKIQELK 80
W +RE +YD ED ++ F + + G+ L++ A + + + + ++I+E+
Sbjct: 61 WVAGIREASYDAEDILEAFFLK-AESRKQKGMKRVLRRLACILNEAVSLHSVGSEIREIT 119
Query: 81 ARVMEVAQRRSRYIGLGEAT-----TSCPKVVEIDPRLPALYEAAKNLVGIDGPREEISR 135
+R+ ++A + G+ E+ + + E P Y NLVG++ E++
Sbjct: 120 SRLSKIAASMLDF-GIKESMGREGLSLSDSLREQRQSFP--YVVEHNLVGLEQSLEKLVN 176
Query: 136 WLTEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVY--KQVKDKFNCTSFLSVSKN 188
L G+ +L+V SI G GGLGKTTLA Q++ +V+ F+ +++ VS++
Sbjct: 177 DLVSGGE-----KLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAWVYVSQD 226
>AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848
Length = 847
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 16/194 (8%)
Query: 1 LAEMNVVLEKLADMERLDGQQKLWRDNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTA 60
L + V L+ + ++ D K W V ++AYD+ED +D + L ++ GL++ T
Sbjct: 38 LTCIQVYLKNVEVCDKEDEVSKEWTKLVLDIAYDVEDVLDTYFLKLEKRLHRLGLMRLT- 96
Query: 61 RKIRKLRVRYQIANKIQELKARVMEVAQRRSRYIGLGE-----ATTSCPKVVEIDPRLPA 115
I + Y I + I+ LK R ++V ++ Y G+G S +V E+ R
Sbjct: 97 NIISDKKDAYNILDDIKTLKRRTLDVTRKLEMY-GIGNFNEHRVVASTSRVREV--RRAR 153
Query: 116 LYEAAKNLVGI-DGPREEISRWLTEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ-- 172
+ + +VG+ D + +++ L ++G + ++ ++SI G GLGKT+LA +++
Sbjct: 154 SDDQEERVVGLTDDAKVLLTKLLDDDGDN----KIYMISIFGMEGLGKTSLARKLFNSSD 209
Query: 173 VKDKFNCTSFLSVS 186
VK+ F + +VS
Sbjct: 210 VKESFEYRVWTNVS 223
>AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853
Length = 852
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 27 NVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRV--RYQIANKIQELKARVM 84
++RE+ Y+ ED + GD N+ ++ RV +Y+ + ++QE+ R+
Sbjct: 64 DLRELVYEAEDILVDCQLADGDDGNEQRSSNAWLSRLHPARVPLQYKKSKRLQEINERIT 123
Query: 85 EVAQRRSRYIGLGEATTSCPKVVEID---PRLPALYEAAKNLVGIDGPREEISRWLTEEG 141
++ + Y E T P V D R + +VG++G + +I WL
Sbjct: 124 KIKSQVEPYF---EFIT--PSNVGRDNGTDRWSSPVYDHTQVVGLEGDKRKIKEWLFRSN 178
Query: 142 QSGPTQQLKVVSIVGFGGLGKTTLANQVY--KQVKDKFNCTSFLSVSK 187
S QL +++ VG GGLGKTT+A +V+ K+++ +F ++SVS+
Sbjct: 179 DS----QLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQ 222
>AT3G14470.1 | chr3:4857940-4861104 FORWARD LENGTH=1055
Length = 1054
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 30/184 (16%)
Query: 24 WRDNVREMAYDIEDCIDVFM---YHLGDGHNKDGLLQKTARKIRKLRVRYQIANKI---- 76
W + +R++ Y ED +D L G ++ ++R+LR R + + +
Sbjct: 69 WVNELRDVVYHAEDALDDIATEALRLNIGAESS-----SSNRLRQLRGRMSLGDFLDGNS 123
Query: 77 QELKARVMEVAQRRSRY------IGLGEATTSCPKVVEIDPRLP--ALYEAAKNLVGIDG 128
+ L+ R+ +V R R +GL E T PK RLP +L + ++ + G D
Sbjct: 124 EHLETRLEKVTIRLERLASQRNILGLKELTAMIPK-----QRLPTTSLVDESE-VFGRDD 177
Query: 129 PREEISRWLTEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVY--KQVKDKFNCTSFLSVS 186
++EI R+L E +G + VV+IVG GG+GKTTL+ +Y + V+ F + VS
Sbjct: 178 DKDEIMRFLIPE--NGKDNGITVVAIVGIGGVGKTTLSQLLYNDQHVRSYFGTKVWAHVS 235
Query: 187 KNPD 190
+ D
Sbjct: 236 EEFD 239
>AT1G59218.1 | chr1:21828398-21831713 FORWARD LENGTH=1050
Length = 1049
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 21/173 (12%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKL---RVRYQI-----ANKIQ 77
+ ++E+ YD ED I+ F+ G K ++K+ R++ + R RY + +N+I
Sbjct: 63 EEIKEIIYDGEDTIETFVLEQNLG--KTSGIKKSIRRLACIIPDRRRYALGIGGLSNRIS 120
Query: 78 ELKARVMEVAQRRSRYIGLGEATTSCPKVVEIDPRLPALYEAAKNLVGIDGPREEISRWL 137
++ R M+ + + G K E+ PR + + VG++ +++ +L
Sbjct: 121 KV-IRDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSK--DDDSDFVGLEANVKKLVGYL 177
Query: 138 TEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSKN 188
+E ++VVSI G GGLGKTTLA QV+ VK +F+ S++ VS++
Sbjct: 178 VDEAN------VQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQD 224
>AT1G58848.1 | chr1:21792140-21795455 FORWARD LENGTH=1050
Length = 1049
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 88/173 (50%), Gaps = 21/173 (12%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKL---RVRYQI-----ANKIQ 77
+ ++E+ YD ED I+ F+ G K ++K+ R++ + R RY + +N+I
Sbjct: 63 EEIKEIIYDGEDTIETFVLEQNLG--KTSGIKKSIRRLACIIPDRRRYALGIGGLSNRIS 120
Query: 78 ELKARVMEVAQRRSRYIGLGEATTSCPKVVEIDPRLPALYEAAKNLVGIDGPREEISRWL 137
++ R M+ + + G K E+ PR + + VG++ +++ +L
Sbjct: 121 KV-IRDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSK--DDDSDFVGLEANVKKLVGYL 177
Query: 138 TEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSKN 188
+E ++VVSI G GGLGKTTLA QV+ VK +F+ S++ VS++
Sbjct: 178 VDEAN------VQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQD 224
>AT5G48620.1 | chr5:19717406-19720932 FORWARD LENGTH=909
Length = 908
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRVRYQIANKIQELKARVME 85
++V+++ +D ED I+ ++ + G K G+ + R R L R+++A+ I+ + R+ +
Sbjct: 63 EDVKDLVFDAEDIIESYVLNKLRGEGK-GVKKHVRRLARFLTDRHKVASDIEGITKRISD 121
Query: 86 VAQRRSRY----IGLGEATTSCPKVVEIDPRLPALY--EAAKNLVGIDGPREEISRWLTE 139
V + I G + S + + + Y + +LVG++ EE+ L E
Sbjct: 122 VIGEMQSFGIQQIIDGVRSLSLQERQRVQREIRQTYPDSSESDLVGVEQSVEELVGHLVE 181
Query: 140 EGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSK 187
+VVSI G GG+GKTTLA QV+ V+ F+ +++ VS+
Sbjct: 182 ------NDIYQVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQ 225
>AT1G58400.1 | chr1:21696165-21699118 REVERSE LENGTH=901
Length = 900
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 19/197 (9%)
Query: 2 AEMNVVLEKLADMERLDGQQKLWR---DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQK 58
+ +N++ L D E ++ R + ++E+ YD E+ I+ F+ L + K + +
Sbjct: 36 SNLNLLKSFLKDAEAKKNTSQMVRHCVEEIKEIVYDTENMIETFI--LKEAARKRSGIIR 93
Query: 59 TARKIRKLRV-RYQIANKIQELKARVMEVAQRRSRY-----IGLGEATTSCPKVVEIDPR 112
K+ ++V R++ A+ I + R+ +V Q + I G ++ + E + R
Sbjct: 94 RITKLTCIKVHRWEFASDIGGISKRISKVIQDMHSFGVQQMISDGSQSSHLLQEREREMR 153
Query: 113 LPALYEAAKNLVGIDGPREEISRWLTEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ 172
+ VG++ +++ +L EE +++VS+ G GGLGKTTLA QV+
Sbjct: 154 QTFSRGYESDFVGLEVNVKKLVGYLVEE------DDIQIVSVTGMGGLGKTTLARQVFNH 207
Query: 173 --VKDKFNCTSFLSVSK 187
VK +F+ +++ VS+
Sbjct: 208 EDVKHQFDRLAWVCVSQ 224
>AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928
Length = 927
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 15/169 (8%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRV-RYQIANKIQELKARVM 84
++V+++ YD +D I+ F+ L + K+ ++K R + V R + A+ I+ + R+
Sbjct: 63 EDVKDIVYDADDIIESFL--LNELRGKEKGIKKQVRTLACFLVDRRKFASDIEGITKRIS 120
Query: 85 EVAQRRS----RYIGLGEATTSCPKVVEIDPRLPALYEAAKNLVGIDGPREEISRWLTEE 140
EV ++I G + + + + R + +LVG+D EE+ L E
Sbjct: 121 EVIVGMQSLGIQHIADGGGRSLSLQERQREIRQTFSRNSESDLVGLDQSVEELVDHLVE- 179
Query: 141 GQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSK 187
++VVS+ G GG+GKTTLA QV+ V+ F+ S++ VS+
Sbjct: 180 -----NDSVQVVSVSGMGGIGKTTLARQVFHHDIVRRHFDGFSWVCVSQ 223
>AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909
Length = 908
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRVRYQIANKIQELKARVME 85
++V+++ +D ED I+ ++ + G K G+ + R L R+++A+ I+ + R+ E
Sbjct: 63 EDVKDLVFDAEDIIESYVLNKLSGKGK-GVKKHVRRLACFLTDRHKVASDIEGITKRISE 121
Query: 86 VAQRRSRY----IGLGEATTSCPKVVEIDPRLPALY--EAAKNLVGIDGPREEISRWLTE 139
V + I G + S + + + Y + +LVG++ +E+ L E
Sbjct: 122 VIGEMQSFGIQQIIDGGRSLSLQERQRVQREIRQTYPDSSESDLVGVEQSVKELVGHLVE 181
Query: 140 EGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSK 187
+VVSI G GG+GKTTLA QV+ V+ F+ +++ VS+
Sbjct: 182 NDVH------QVVSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQ 225
>AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902
Length = 901
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRVRYQIANKIQELKARV-- 83
++V+++ +D ED I+ ++ + G K G+ R L R+++A+ I+ + R+
Sbjct: 63 EDVKDLVFDAEDIIESYVLNKLRGEGK-GVKNHVRRLACFLTDRHKVASDIEGITKRISK 121
Query: 84 ----MEVAQRRSRYIGLGEATTSCPKVVEIDPRLPALYEAAKNLVGIDGPREEISRWLTE 139
M+ + + I G + + EI P E+ +LVG++ EE+ + E
Sbjct: 122 VIGEMQSLGIQQQIIDGGRSLSLQDIQREIRQTFPNSSES--DLVGVEQSVEELVGPMVE 179
Query: 140 EGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSKN 188
++VVSI G GG+GKTTLA Q++ V+ F+ +++ VS+
Sbjct: 180 ------IDNIQVVSISGMGGIGKTTLARQIFHHDLVRRHFDGFAWVCVSQQ 224
>AT1G59124.1 | chr1:21816832-21819653 FORWARD LENGTH=856
Length = 855
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKL---RVRYQIANKIQELKAR 82
+ ++E+ YD ED I+ F+ G K ++K+ R++ + R RY + I L R
Sbjct: 63 EEIKEIIYDGEDTIETFVLEQNLG--KTSGIKKSIRRLACIIPDRRRYALG--IGGLSNR 118
Query: 83 VMEVAQRRSRYIGLGEATTSCP-KVVEIDPRLPALYEAAKN----LVGIDGPREEISRWL 137
+ +V R + G+ +A K + D + + +K+ VG++ +++ +L
Sbjct: 119 ISKVI-RDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDDDSDFVGLEANVKKLVGYL 177
Query: 138 TEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSKN 188
+E ++VVSI G GGLGKTTLA QV+ VK +F+ S++ VS++
Sbjct: 178 VDEAN------VQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQD 224
>AT1G58807.1 | chr1:21780574-21783793 FORWARD LENGTH=1018
Length = 1017
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKL---RVRYQIANKIQELKAR 82
+ ++E+ YD ED I+ F+ L K ++K+ R++ + R RY + I L R
Sbjct: 63 EEIKEIIYDGEDTIETFV--LEQNLGKTSGIKKSIRRLACIIPDRRRYALG--IGGLSNR 118
Query: 83 VMEVAQRRSRYIGLGEATTSCP-KVVEIDPRLPALYEAAKN----LVGIDGPREEISRWL 137
+ +V R + G+ +A K + D + + +K+ VG++ +++ +L
Sbjct: 119 ISKVI-RDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDDDSDFVGLEANVKKLVGYL 177
Query: 138 TEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSKN 188
+E ++VVSI G GGLGKTTLA QV+ VK +F+ S++ VS++
Sbjct: 178 VDEAN------VQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQD 224
>AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907
Length = 906
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 33/174 (18%)
Query: 26 DNVREMAYDIEDCIDVFMYHLGDGHNKDGLLQKTARKIRKLRV----RYQIANKIQELKA 81
+ ++E+ YD ED I++F L K + +R L R +IA +I +
Sbjct: 68 EEIKEITYDAEDIIEIF-------------LLKGSVNMRSLACFPGGRREIALQITSISK 114
Query: 82 RVMEVAQR------RSRYIGLGEATTSCPKVVEIDPRLPALYEAAKNLVGIDGPREEISR 135
R+ +V Q +S + ++ + E+ + E+ NLVG++ E++
Sbjct: 115 RISKVIQVMQNLGIKSDIMDGVDSHAQLERKRELRHTFSS--ESESNLVGLEKNVEKLVE 172
Query: 136 WLTEEGQSGPTQQLKVVSIVGFGGLGKTTLANQVYKQ--VKDKFNCTSFLSVSK 187
L S VSI G GGLGKTTLA Q++ VK F+ +++ VS+
Sbjct: 173 ELVGNDSSHG------VSITGLGGLGKTTLARQIFDHDKVKSHFDGLAWVCVSQ 220
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,631,797
Number of extensions: 169086
Number of successful extensions: 750
Number of sequences better than 1.0e-05: 19
Number of HSP's gapped: 751
Number of HSP's successfully gapped: 19
Length of query: 242
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 146
Effective length of database: 8,474,633
Effective search space: 1237296418
Effective search space used: 1237296418
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 110 (47.0 bits)