BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0454300 Os12g0454300|Os12g0454300
(1051 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G28780.1 | chr5:10812907-10814173 REVERSE LENGTH=338 196 6e-50
AT3G51700.1 | chr3:19179443-19181145 REVERSE LENGTH=345 177 2e-44
AT3G51690.1 | chr3:19176731-19178107 REVERSE LENGTH=332 175 1e-43
AT5G08020.1 | chr5:2572107-2574879 FORWARD LENGTH=605 75 2e-13
AT5G61000.1 | chr5:24549682-24552641 REVERSE LENGTH=630 70 6e-12
AT2G06510.1 | chr2:2585215-2587601 FORWARD LENGTH=641 69 1e-11
AT4G19130.1 | chr4:10466618-10469092 REVERSE LENGTH=785 68 2e-11
AT1G14800.1 | chr1:5099572-5102558 FORWARD LENGTH=385 66 1e-10
AT2G05642.1 | chr2:2098253-2100867 REVERSE LENGTH=533 65 2e-10
AT5G45400.1 | chr5:18398990-18401644 FORWARD LENGTH=854 63 9e-10
AT1G52950.1 | chr1:19725483-19728007 FORWARD LENGTH=567 52 2e-06
>AT5G28780.1 | chr5:10812907-10814173 REVERSE LENGTH=338
Length = 337
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 158/267 (59%), Gaps = 14/267 (5%)
Query: 278 LLNTNLEQKQKDELHDF-SKW--------VLAIGNGTLPMT-TKEGESYPSWIEIPHDLL 327
+LN +E KD +KW +GNG P T +GE +E+
Sbjct: 31 VLNEYMEAVGKDSYEGINTKWNTSRHCTCCYNVGNGNAPTCETDDGE----VVEMDTSFF 86
Query: 328 IITDGDKISAIVNEVYCDFLASYMNPEYLASRAIVCPNNATVDEINDYVIGLVPREARIY 387
+ +G+++ + Y F S N +YL R I+ P+N VDEIN Y++ V +++ Y
Sbjct: 87 LKHNGNRLQQVTKGAYVQFSVSQPNFQYLTERGILTPHNEYVDEINAYMLSQVGGDSKEY 146
Query: 388 LSCDTISKCSEQIPDFDLLYPPEFLNSINVANFPTHRLILKEGVVVMLLRNLNQSIGLCN 447
LS +I K D++ LY ++LNS+ + P H++ LK+GV +M +RN NQ GLCN
Sbjct: 147 LSSYSIGKADTIGADYEALYHVKYLNSLEFPSLPKHKISLKKGVPIMQMRNFNQKEGLCN 206
Query: 448 GTRLLIVALGDRILQCIILTGSNIGDTVYIPRITLSTTKMKWPFTLQRRQFPIRVCYAMT 507
GTRL++ LG+++++ I+TG++ G V IPR LS + + PFTL+R+QFP+RVCYAMT
Sbjct: 207 GTRLIVTNLGEQVIEAQIVTGTHAGKMVSIPRFILSPPQSEHPFTLRRQQFPMRVCYAMT 266
Query: 508 INKSQGQTLQRVGVYLRKPVFTHGQLF 534
I K+QGQ+L+ +YL PVF+H QL+
Sbjct: 267 IIKNQGQSLKSDVLYLPNPVFSHVQLY 293
>AT3G51700.1 | chr3:19179443-19181145 REVERSE LENGTH=345
Length = 344
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 150/262 (57%), Gaps = 5/262 (1%)
Query: 273 NINMRLLNTNLEQKQKDELHDFSKWVLAIGNGTLPMTTKEGESYPSWIEIPHDLLIITDG 332
+I+M LL+++ + F+KW+ IG + +GE+ I+I DLLI
Sbjct: 39 SIDMVLLDSSGTKIHTTIDEAFTKWITNIGGENI-NKPNDGETK---IDIHEDLLITECK 94
Query: 333 DKISAIVNEVYCDFLASYMNPEYLASRAIVCPNNATVDEINDYVIGLVPREARIYLSCDT 392
D I IV+EVY + NP++ RAI+C N DEINDY++ + E DT
Sbjct: 95 DPIKTIVDEVYGESFTESYNPDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADT 154
Query: 393 ISKCSEQIPDFDLLYPPEFLNSINVANFPTHRLILKEGVVVMLLRNLNQSIGLCNGTRLL 452
I P+ +LYP EFLNSI + FP +L LK G VMLLR+L L GTRL
Sbjct: 155 IYPTHAS-PNDKMLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLRKGTRLQ 213
Query: 453 IVALGDRILQCIILTGSNIGDTVYIPRITLSTTKMKWPFTLQRRQFPIRVCYAMTINKSQ 512
I + +L+ +I+TG+N G+ V IPRI + K+P ++RRQFP+++ +AMTI++SQ
Sbjct: 214 ITRVETFVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPVKLAFAMTIDESQ 273
Query: 513 GQTLQRVGVYLRKPVFTHGQLF 534
QTL +VG+YL + + HGQ +
Sbjct: 274 RQTLSKVGIYLPRQLLFHGQRY 295
>AT3G51690.1 | chr3:19176731-19178107 REVERSE LENGTH=332
Length = 331
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 144/242 (59%), Gaps = 9/242 (3%)
Query: 294 FSKWVLAIGNGTLPMTTKEGESYPSWIEIPHDLLIITDGDKISAIVNEVYCDFLASYMNP 353
S+W++ I + +GE+ I+I DLLI D I ++ EVY ++ A NP
Sbjct: 59 LSRWIMNISGDNI-NNPNDGETE---IDISKDLLITESKDPIKTLLKEVYGEYFAKSYNP 114
Query: 354 EYLASRAIVCPNNATVDEINDYVIGLVPREARIYLSCDTISKCSEQIPDFDLLYPPEFLN 413
++ AI+C + VD+INDY++ L+P E + LS D+IS P+ D+ P E LN
Sbjct: 115 DFCHDSAILCHRDDDVDQINDYMLSLLPGEEKECLSTDSISPS----PNDDMFVPLEVLN 170
Query: 414 SINVANFPTHRLILKEGVVVMLLRNLNQSIGLCNGTRLLIVALGDRILQCIILTGSNIGD 473
SI V P +L LK G VMLLR+L+ S G GTRL I L +L+ +I+ G+ G
Sbjct: 171 SIKVPGLPDFKLRLKVGAPVMLLRDLDPSRGFFTGTRLQITRLCGFLLEAMIIAGNKHGK 230
Query: 474 TVYIPRITLSTTKMKWPFTLQRRQFPIRVCYAMTINKSQGQTLQRVGVYLRKPVFTHG-Q 532
++IPRI T+ +P ++R Q+P+++ +AMTI++SQ TL +VG+YL + VF+HG Q
Sbjct: 231 KIWIPRIASYPTETNFPLQMRRTQYPLKLAFAMTIDESQVHTLSKVGLYLPRQVFSHGRQ 290
Query: 533 LF 534
+F
Sbjct: 291 MF 292
>AT5G08020.1 | chr5:2572107-2574879 FORWARD LENGTH=605
Length = 604
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 5/207 (2%)
Query: 576 DLVLLDETGNSIHAQMYQHVIVNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSQMILFT 635
++ L DE G I A M+ + GKVYYI +++ AN+ ++ V + +
Sbjct: 196 NVELTDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLN 255
Query: 636 KWTTLEECVDVPADFPAITFSLTPFGDVPSLVDKNIFYVDIMGVITEIGTTSTVRPQSRN 695
+ + +EE + P F+ P ++ + V++ +D++GV+ + T ++R ++ N
Sbjct: 256 ENSEVEEASNEEMFTPETKFNFVPIDELGTYVNQKDL-IDVIGVVQSVSPTMSIRRKNDN 314
Query: 696 TDSLKRTLQICDASNSTLPLTLWGERATAFDAENIYNAGQRQPQVVVFVGTLVKNYKGLG 755
KR + + D + T+ ++LW + AT E + + P V+ V ++G+
Sbjct: 315 EMIPKRDITLADETKKTVVVSLWNDLATGIGQE-LLDMADNHP-VIAIKSLKVGAFQGVS 372
Query: 756 LTLTGSSPCKWYINLEIPEVVELKERY 782
L+ S IN PE +LK Y
Sbjct: 373 LSTISRSNV--VINPNSPEATKLKSWY 397
>AT5G61000.1 | chr5:24549682-24552641 REVERSE LENGTH=630
Length = 629
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 11/245 (4%)
Query: 538 HILISQLSCGDSNIRIKARVSR---LWDFHDLNDDRKIVHTDLVLLDETGNSIHAQMYQH 594
H L+S L+ N IK RV+ + ++ + + + + +L DE G I A M+
Sbjct: 182 HPLVS-LNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELT--DEEGTQIQATMFND 238
Query: 595 VIVNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAIT 654
Q GKVYYI +++ AN+ ++ V + + + + +EE P
Sbjct: 239 AARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETK 298
Query: 655 FSLTPFGDVPSLVDKNIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLP 714
F+ P ++ V++ +D++GV+ + T ++R ++ N KR + + D S T+
Sbjct: 299 FNFVPIEELGLYVNQKEL-IDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVV 357
Query: 715 LTLWGERATAFDAENIYNAGQRQPQVVVFVGTLVKNYKGLGLTLTGSSPCKWYINLEIPE 774
++LW + AT E + + + P V+ V +++G+ L+ S IN E PE
Sbjct: 358 VSLWNDLATGIGQE-LLDMADQSP-VIAIKSLKVGDFQGVSLSTISRSNV--VINPESPE 413
Query: 775 VVELK 779
+LK
Sbjct: 414 AKKLK 418
>AT2G06510.1 | chr2:2585215-2587601 FORWARD LENGTH=641
Length = 640
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 20/274 (7%)
Query: 553 IKARVSRLWDFHDLND---DRKIVHTDLVLLDETGNSIHAQMYQHVIVNLKPLLQEGKVY 609
IKARV+ D N+ D K+ DL LD G I + ++ + + GKVY
Sbjct: 212 IKARVTAKGDIRRYNNAKGDGKVFSFDL--LDYDGGEIRVTCFNALVDRFYDVTEVGKVY 269
Query: 610 YIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSLTPFGDVPSLVDK 669
I +++ A + + + + I +T+E C D P FS P D+ + +
Sbjct: 270 LISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPISDIENAENN 329
Query: 670 NIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLTLWGE--RATAFDA 727
I +D++GV+T + + + + ++ +R L + D S + +TLWGE
Sbjct: 330 TI--LDVIGVVTSVNPSVPIL-RKNGMETHRRILNLKDESGKAVEVTLWGEFCNRDGRQL 386
Query: 728 ENIYNAGQRQPQVVVFVGTLVKNYKGLGLTLTGSSPCKWYINLEIPEVVELKERYKLVLI 787
E + ++ P + + G V ++ G + S+ + +IN + PE +L+ +
Sbjct: 387 EEMVDSA-FHPVLAIKAGK-VSDFSGKSVGTISST--QLFINPDFPEAHKLRTWFDY--- 439
Query: 788 AGDTTADATF---ILFGKTAQRIIRRPVESLIEE 818
G TA + + G ++ IR+ V + EE
Sbjct: 440 GGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEE 473
>AT4G19130.1 | chr4:10466618-10469092 REVERSE LENGTH=785
Length = 784
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 114/236 (48%), Gaps = 14/236 (5%)
Query: 553 IKARVSR---LWDFHDLNDDRKIVHTDLVLLDETGNSIHAQMYQHVIVNLKPLLQEGKVY 609
IKARV+ L + + + K+ + DL LD G I + V + G +Y
Sbjct: 243 IKARVTNKAALKQYSNPRGEGKVFNFDL--LDADGGEIRVTCFNAVADQFYDQIVVGNLY 300
Query: 610 YIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSLTPFGDVPSLVDK 669
I ++R A + + + + I+ +T+++C + A P F GD+ S+ +
Sbjct: 301 LISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHFRTIGDIESM--E 358
Query: 670 NIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLTLWGE--RATAFDA 727
N VD++G+++ I T T+ + T + KR+LQ+ D S ++ +T+WG+ A
Sbjct: 359 NNCIVDVIGIVSSISPTVTI-TRKNGTATPKRSLQLKDMSGRSVEVTMWGDFCNAEGQRL 417
Query: 728 ENIYNAGQRQPQVVVFVGTLVKNYKGLGLTLTGSSPCKWYINLEIPEVVELKERYK 783
+++ ++G P + V G + + G ++ GSS + +I+ + E +LK ++
Sbjct: 418 QSLCDSGVF-PVLAVKAGR-ISEFNGKTVSTIGSS--QLFIDPDFVEAEKLKNWFE 469
>AT1G14800.1 | chr1:5099572-5102558 FORWARD LENGTH=385
Length = 384
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 538 HILISQLSCGDSNIRIKARVSRLWDFHDLNDDRKIVHTDLVLLDETGNSIHAQMYQHVIV 597
++ L G S ++ R+ R WD ++ D + + L+LLDE + IHA + +
Sbjct: 15 YVAFDALRLGRSTQQVVGRLLRFWDARNIKKDGQFMGIVLLLLDEKCSVIHAFIPAALAS 74
Query: 598 NLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSL 657
+ + +L+EG ++ + F V + Y+ H ++ F TT+ E DV F L
Sbjct: 75 HFRQVLREGIIFNVSGFEVGRCTKLYKITDHPFLLRFLPATTIIEVSDVGPTIEREKFML 134
Query: 658 TPFGDVPSLVDKNIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLTL 717
F ++ +L + NI ++ G IT + ++ P S L+ + S+ + L+L
Sbjct: 135 RNFDNLQALANTNI---ELPGQITFVQGSNLNDPTSTQRLVLRYRID----SSVIVYLSL 187
Query: 718 WGERATAFDA 727
W + A F A
Sbjct: 188 WDDVAATFRA 197
>AT2G05642.1 | chr2:2098253-2100867 REVERSE LENGTH=533
Length = 532
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 106/264 (40%), Gaps = 72/264 (27%)
Query: 541 ISQLSCGDSNIRIKARVSRLWDFHDLNDDRKIVHTDLVLLDETGNSIHAQMYQHVIVNLK 600
+SQL S ++K R++RLW +H + + I+ DL+L+D+ G I A + ++ +
Sbjct: 8 VSQLHSHLSTCKVKVRIARLWAYHKKDRPKDIMGIDLLLVDDKGERIQASIRSQLLSKFQ 67
Query: 601 PLLQEGKVYYIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSLTPF 660
L+EG Y I +F + +YR +H I F S+T
Sbjct: 68 EKLEEGDCYMIMNFEISDNGGSYRASSHPYKINF--------------------MSMTHI 107
Query: 661 GDVPSLVDKNIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLTLWGE 720
+ L + N+ R T L LQ+ D S + +TLW +
Sbjct: 108 IGMQELKEVNV--------------------SGRQTKLL--NLQLRDLGESVIDVTLWEK 145
Query: 721 RATAFDAENIYN--AGQRQPQVVVFVGTLVK---NYKGLGLTLT---------------- 759
AE++Y+ G + +V+ VG+L+K +K + LT T
Sbjct: 146 W-----AEDLYSYVKGYKDGSIVL-VGSLMKIKTYFKNVYLTFTIRDSLIWFLIFSRQDL 199
Query: 760 ---GSSPCKWYINLEIPEVVELKE 780
S K +IN I E+ E KE
Sbjct: 200 CPKSSFSTKLFINSSIAEITEFKE 223
>AT5G45400.1 | chr5:18398990-18401644 FORWARD LENGTH=854
Length = 853
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 15/236 (6%)
Query: 553 IKARVSRLWDFHDLNDDR---KIVHTDLVLLDETGNSIHAQMYQHVIVNLKPLLQEGKVY 609
IK RV+ D N+ R K+ DL LD G I + + + G VY
Sbjct: 314 IKVRVTSKADLRRFNNPRGEGKLFSFDL--LDADGGEIRVTCFNDAVDQFFDKIVVGNVY 371
Query: 610 YIDSFTVRYANRTYRPVAHSQMILFTKWTTLEECVDVPADFPAITFSLTPFGDVPSLVDK 669
I ++ A + + + + I +T++ C D P F GD+ ++ +
Sbjct: 372 LISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPCED-DGTIPRYHFHFRNIGDIENM--E 428
Query: 670 NIFYVDIMGVITEIGTTSTVRPQSRNTDSLKRTLQICDASNSTLPLTLWGE--RATAFDA 727
N D++G+++ I T + ++ T+ KR+LQ+ D S ++ +T+WG A
Sbjct: 429 NNSTTDVIGIVSSISPTVAIMRKNL-TEVQKRSLQLKDMSGRSVEVTMWGNFCNAEGQKL 487
Query: 728 ENIYNAGQRQPQVVVFVGTLVKNYKGLGLTLTGSSPCKWYINLEIPEVVELKERYK 783
+N+ ++G V+ + + G ++ G+S +++I + PE EL++ Y+
Sbjct: 488 QNLCDSGVF--PVLALKAGRIGEFNGKQVSTIGAS--QFFIEPDFPEARELRQWYE 539
>AT1G52950.1 | chr1:19725483-19728007 FORWARD LENGTH=567
Length = 566
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 576 DLVLLDETGNSIHAQMYQHVIVNLKPLLQEGKVYYIDSFTVRYANRTYRPVAHSQMILFT 635
+++L DE GN I A + + ++ L+ ++ G I+ F+V A+ YR H I
Sbjct: 42 EMMLADEDGNKIQAGIKKEHLLKLQRYVKIGHWTIIEEFSVTKASGLYRSTTHPYRINIQ 101
Query: 636 KWTTLEECVDVPADFPAITFSLTPFGDVPS-LVDKNIFYVDIMGVITEIGTTSTVRPQSR 694
T + P I L F DV S +D+N V+++G + +G + Q +
Sbjct: 102 SSTRFS---NSPTISDEIWLDLVNFNDVLSGTLDQNKL-VNVIGQLVNVGEIQLLDVQGK 157
Query: 695 NTDSLKRTLQICDASNSTLPLTLWGERA 722
T + Q+ D ++ LP +LWG+ A
Sbjct: 158 PTKKI--DFQLRDTDDNRLPCSLWGKFA 183
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 21,664,732
Number of extensions: 897570
Number of successful extensions: 2440
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 2437
Number of HSP's successfully gapped: 11
Length of query: 1051
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 942
Effective length of database: 8,118,225
Effective search space: 7647367950
Effective search space used: 7647367950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)