BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0448900 Os12g0448900|AK100592
         (618 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G01420.1  | chr3:159689-162726 REVERSE LENGTH=640              787   0.0  
AT1G73680.2  | chr1:27704221-27707417 REVERSE LENGTH=641          724   0.0  

>AT3G01420.1 | chr3:159689-162726 REVERSE LENGTH=640
          Length = 639

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/608 (61%), Positives = 469/608 (77%), Gaps = 1/608 (0%)

Query: 10  VHPDLRDVFSKMSFFDKIGFLFIHAFDKRNLWHKVPVPIGLLYLNTRRTLLEKYNLLAVG 69
           +H D  +++++MS  D+   L +H  DK   WHK+PV +GL YL  RR L ++YNLL VG
Sbjct: 16  IHKDFHEIYARMSLLDRFLLLIVHGVDKMVPWHKLPVFLGLTYLEVRRHLHQQYNLLNVG 75

Query: 70  RSSHGALFDPKEFLYRTEDGKYNDPHNAEAGSQNTFFGRNMEPVDQQDELMSPDPFVVAT 129
           ++  G  FDP  + YRT DGK+NDP N   GSQN+FFGRN  PVDQ+ +L  PDP VVAT
Sbjct: 76  QTPTGIRFDPANYPYRTADGKFNDPFNEGVGSQNSFFGRNCPPVDQKSKLRRPDPMVVAT 135

Query: 130 KLLARREYKDTGKQFNILAAAWIQFMVHDWMDHMEDTGQIGITAPKEVANECPLKSFKFH 189
           KLL R+++ DTGKQFN++AA+WIQFM+HDW+DH+EDT QI + APKEVA++CPL SF+F 
Sbjct: 136 KLLGRKKFIDTGKQFNMIAASWIQFMIHDWIDHLEDTHQIELVAPKEVASKCPLSSFRFL 195

Query: 190 PTKELPTNSDGIKIGHYNIRTAWWDGSAVYGNNEERAEKLRTYVDGKLVIGDD-GLLLHK 248
            TKE+PT    IK G  NIRT WWD S +YG+N +  +++RTY DGKL I ++ GLLLH 
Sbjct: 196 KTKEVPTGFFEIKTGSQNIRTPWWDSSVIYGSNSKTLDRVRTYKDGKLKISEETGLLLHD 255

Query: 249 ENGVALSGDIRNSWAGVSILQALFVKEHNAVCDAIKEEHPNLSDEELYRYAKLVTSAVIA 308
           E+G+A+SGDIRNSWAGVS LQALF+KEHNAVCDA+K+E  +L DE+LYRYA+LVTSAV+A
Sbjct: 256 EDGLAISGDIRNSWAGVSALQALFIKEHNAVCDALKDEDDDLEDEDLYRYARLVTSAVVA 315

Query: 309 KVHTIDWTVELLKTKTMRAAMRANWYGLLGKKIKDTFXXXXXXXXXXXXXXXXXNNHGVP 368
           K+HTIDWTV+LLKT T+ A MRANWYGLLGKK KD+F                  NHGVP
Sbjct: 316 KIHTIDWTVQLLKTDTLLAGMRANWYGLLGKKFKDSFGHAGSSILGGVVGMKKPQNHGVP 375

Query: 369 YSLTEEFTSVYRMHSLIPSTLKLRDPTGQPDANNSPPCLEDIDIGEMIGLKGEEQLSKIG 428
           YSLTE+FTSVYRMHSL+P  L + D    P  N S P +++I + ++IG KGEE +S IG
Sbjct: 376 YSLTEDFTSVYRMHSLLPDQLHILDIDDVPGTNKSLPLIQEISMRDLIGRKGEETMSHIG 435

Query: 429 FEKQALSMGYQACGALELWNYPSFFRNLIPQNLDGTNRSDRIDLAALEVYRDRERSVPRY 488
           F K  +SMG+QA GALEL NYP + R+++P + +G  R D +DLAALE+YRDRERSVPRY
Sbjct: 436 FTKLMVSMGHQASGALELMNYPMWLRDIVPHDPNGQARPDHVDLAALEIYRDRERSVPRY 495

Query: 489 NEFRRRLFLIPIKSWEDLTSDKDAIETIRAIYGDDVEKLDLLVGLMAEKKIKGFAISETA 548
           NEFRR +F+IPI  WEDLT D++AIE +  +Y  DVE+LDLLVGLMAEKKIKGFAISETA
Sbjct: 496 NEFRRSMFMIPITKWEDLTEDEEAIEVLDDVYDGDVEELDLLVGLMAEKKIKGFAISETA 555

Query: 549 FNIFILMASRRLEADRFFTSNFNEETYTKKGMQWVKTTEGLRDVINRHYPEITAKWMKSS 608
           F IF++MA+RRLEADRFFTS+FNE  YTKKG++WV TTE L+DVI+RHYP++T KWM S 
Sbjct: 556 FYIFLIMATRRLEADRFFTSDFNETIYTKKGLEWVNTTESLKDVIDRHYPDMTDKWMNSE 615

Query: 609 SAFSVWDA 616
           SAFSVWD+
Sbjct: 616 SAFSVWDS 623



>AT1G73680.2 | chr1:27704221-27707417 REVERSE LENGTH=641
          Length = 640

 Score =  724 bits (1869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/617 (57%), Positives = 443/617 (71%), Gaps = 11/617 (1%)

Query: 10  VHPDLRDVFSKMSFFDKIGFLFIHAFDKRNLWHKVPVPIGLLYLNTRRTLLEKYNLLAVG 69
           +HP L  V SKMS+FD   F  +H  DK  LWH+ PV +G+ YL  RR L ++YNL+ VG
Sbjct: 11  LHPQLHHVVSKMSYFDAFLFYIVHLVDKLGLWHRFPVLLGVAYLGLRRHLHQRYNLVHVG 70

Query: 70  RSSHGALFDPKEFLYRTEDGKYNDPHNAEAGSQNTFFGRNMEPVDQQDELMSPDPF---- 125
              +G  +D  EF YRT DGK N P +   GSQ +F GRNM P   Q        F    
Sbjct: 71  -PINGQGYDTDEFCYRTADGKCNHPSDNTIGSQGSFIGRNMPPSTSQYGFFCQYFFFPEN 129

Query: 126 -----VVATKLLARREYKDTGKQFNILAAAWIQFMVHDWMDHMEDTGQIGITAPKEVANE 180
                VVATKLLAR+ + D G QFN++A +WIQFM+HDW+DH+EDT QI + AP+EVA+ 
Sbjct: 130 LEKKIVVATKLLARKRFIDNGDQFNVIACSWIQFMIHDWVDHLEDTHQIELEAPEEVASG 189

Query: 181 CPLKSFKFHPTKELPTNSDGIKIGHYNIRTAWWDGSAVYGNNEERAEKLRTYVDGKLVIG 240
           CPLKSFKF  TK++PT+ D  K G  N RT WWDGS +YGN+E    ++R + DGKL I 
Sbjct: 190 CPLKSFKFLRTKKVPTD-DHHKSGAVNTRTPWWDGSVIYGNDETGMRRVRVFKDGKLKIS 248

Query: 241 DDGLLLHKENGVALSGDIRNSWAGVSILQALFVKEHNAVCDAIKEEHPNLSDEELYRYAK 300
            DGLL   E GV +SGDIRNSW+G S+LQALFVKEHN+VCD +KE +P+  DE+LYR A+
Sbjct: 249 GDGLLERDERGVPISGDIRNSWSGFSLLQALFVKEHNSVCDMLKERYPDFDDEKLYRTAR 308

Query: 301 LVTSAVIAKVHTIDWTVELLKTKTMRAAMRANWYGLLGKKIKDTFXXXXXXXXXXXXXXX 360
           LVT+AVIAKVHTIDWT+ELLKT T+ A MR NWYG  GKK+KD                 
Sbjct: 309 LVTAAVIAKVHTIDWTIELLKTDTLTAGMRINWYGFFGKKVKDMVGARFGPLFSGLVGLK 368

Query: 361 XXNNHGVPYSLTEEFTSVYRMHSLIPSTLKLRDPTGQPDANNSPPCLEDIDIGEMIGLKG 420
             N+HGVPYSLTEEF SVYRMH L+P TL LRD   +     +P    +I + E+IG K 
Sbjct: 369 KPNDHGVPYSLTEEFVSVYRMHCLLPETLILRDMNSENVDKENPAIEREIPMTELIGKKA 428

Query: 421 EEQLSKIGFEKQALSMGYQACGALELWNYPSFFRNLIPQNLDGTNRSDRIDLAALEVYRD 480
            E+ SK+GFE+  +SMG+Q+CGAL LWNYP++ RNL+ Q++DG +R   ID+AALE+YRD
Sbjct: 429 GEKASKLGFEQLLVSMGHQSCGALTLWNYPNWMRNLVAQDIDGEDRPHLIDMAALEIYRD 488

Query: 481 RERSVPRYNEFRRRLFLIPIKSWEDLTSDKDAIETIRAIYGDDVEKLDLLVGLMAEKKIK 540
           RER VPRYNEFR+ L + PI  WE+LT D++AI+ +R +Y DD+EKLDL VGL AEKKIK
Sbjct: 489 RERGVPRYNEFRKNLLMSPISKWEELTDDEEAIKVLREVYEDDIEKLDLNVGLHAEKKIK 548

Query: 541 GFAISETAFNIFILMASRRLEADRFFTSNFNEETYTKKGMQWVKTTEGLRDVINRHYPEI 600
           GFAISETAF IF+L+ASRRLEADRFFT+NFNE+TYTK+G++WV TTE L+DVI+RH+P +
Sbjct: 549 GFAISETAFFIFLLVASRRLEADRFFTTNFNEKTYTKEGLEWVNTTETLKDVIDRHFPRL 608

Query: 601 TAKWMKSSSAFSVWDAD 617
           T +WM+ SSAFSVW +D
Sbjct: 609 TDQWMRCSSAFSVWGSD 625



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.136    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,866,138
Number of extensions: 604062
Number of successful extensions: 1262
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1256
Number of HSP's successfully gapped: 2
Length of query: 618
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 514
Effective length of database: 8,255,305
Effective search space: 4243226770
Effective search space used: 4243226770
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)