BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0443500 Os12g0443500|AK105768
(480 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15490.1 | chr5:5027872-5029314 REVERSE LENGTH=481 899 0.0
AT3G29360.1 | chr3:11267375-11268817 REVERSE LENGTH=481 893 0.0
AT5G39320.1 | chr5:15743254-15744696 FORWARD LENGTH=481 885 0.0
AT1G26570.1 | chr1:9182801-9184246 FORWARD LENGTH=482 847 0.0
AT3G01010.1 | chr3:4342-4818 FORWARD LENGTH=159 277 1e-74
>AT5G15490.1 | chr5:5027872-5029314 REVERSE LENGTH=481
Length = 480
Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/480 (88%), Positives = 458/480 (95%)
Query: 1 MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKE 60
MVKICCIGAGYVGGPTMAVIALKCP++EV VVDIS PRI+AWNS+QLPIYEPGLD+VVK+
Sbjct: 1 MVKICCIGAGYVGGPTMAVIALKCPSVEVAVVDISVPRINAWNSDQLPIYEPGLDDVVKQ 60
Query: 61 CRGRNLFFSTDVEKHVAEANIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 120
CRG+NLFFSTDVEKHV EA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVS SD
Sbjct: 61 CRGKNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSD 120
Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIEDLFKPDRVLIGGRE 180
KIVVEKSTVPVKTAEAIEKILTHNSKGI +QILSNPEFLAEGTAIEDLF PDRVLIGGRE
Sbjct: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIEDLFMPDRVLIGGRE 180
Query: 181 TPEGKKAVQALKEVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEAT 240
T EG AV+ALK++YA WVPE+RI+TTNLWSAELSKLAANAFLAQRISSVNA+SALCEAT
Sbjct: 181 TTEGFAAVKALKDIYAQWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240
Query: 241 GANVAEVAYSVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVI 300
GANV+EV+Y+VGKDSRIGPKFLN+SVGFGGSCFQKDILNLVYICECNGLPEVA YWKQVI
Sbjct: 241 GANVSEVSYAVGKDSRIGPKFLNSSVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300
Query: 301 KINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQI 360
KINDYQK+RFVNR+VSSMFNTVS KKIAVLGFAFKKDTGDTRETPAIDVC GLLGDKA++
Sbjct: 301 KINDYQKTRFVNRIVSSMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARL 360
Query: 361 SIYDPQVTEDQIQRDLAMSKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKGAHGVCILT 420
SIYDPQVTE+QIQRDL M+KFDWDHP+HLQP SPT KQVSV WDAY ATK AHG+CILT
Sbjct: 361 SIYDPQVTEEQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVAWDAYTATKDAHGICILT 420
Query: 421 EWDEFKTLDYQKIFDNMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA 480
EWDEFK LD+Q+IF+NMQKPAFVFDGRNVVDA+KLREIGFIVYSIGKPLD WLKDMPA+A
Sbjct: 421 EWDEFKKLDFQRIFENMQKPAFVFDGRNVVDADKLREIGFIVYSIGKPLDQWLKDMPALA 480
>AT3G29360.1 | chr3:11267375-11268817 REVERSE LENGTH=481
Length = 480
Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/480 (88%), Positives = 454/480 (94%)
Query: 1 MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKE 60
MVKICCIGAGYVGGPTMAVIALKCP +EV VVDIS PRI+AWNS+ LPIYEPGLD+VVK+
Sbjct: 1 MVKICCIGAGYVGGPTMAVIALKCPDVEVAVVDISVPRINAWNSDTLPIYEPGLDDVVKQ 60
Query: 61 CRGRNLFFSTDVEKHVAEANIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 120
CRG+NLFFSTDVEKHV EA+I+FVSVNTPTKTRGLGAGKAADLTYWESAARMIADVS SD
Sbjct: 61 CRGKNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSVSD 120
Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIEDLFKPDRVLIGGRE 180
KIVVEKSTVPVKTAEAIEKILTHNSKGI +QILSNPEFLAEGTAI+DLF PDRVLIGGRE
Sbjct: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIKDLFNPDRVLIGGRE 180
Query: 181 TPEGKKAVQALKEVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEAT 240
TPEG KAVQ LK VYAHWVPE +IITTNLWSAELSKLAANAFLAQRISSVNA+SALCEAT
Sbjct: 181 TPEGFKAVQTLKNVYAHWVPEGQIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240
Query: 241 GANVAEVAYSVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVI 300
GA+V +V+Y+VG DSRIGPKFLN+SVGFGGSCFQKDILNLVYICECNGLPEVA YWKQVI
Sbjct: 241 GADVTQVSYAVGTDSRIGPKFLNSSVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVI 300
Query: 301 KINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQI 360
KINDYQKSRFVNRVVSSMFN+VS KKIAVLGFAFKKDTGDTRETPAIDVC GLL DKA++
Sbjct: 301 KINDYQKSRFVNRVVSSMFNSVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLEDKARL 360
Query: 361 SIYDPQVTEDQIQRDLAMSKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKGAHGVCILT 420
SIYDPQVTEDQIQRDL+M+KFDWDHP+HLQP SPT KQV+V WDAYEATK AHG+CI+T
Sbjct: 361 SIYDPQVTEDQIQRDLSMNKFDWDHPLHLQPMSPTTVKQVTVTWDAYEATKDAHGICIMT 420
Query: 421 EWDEFKTLDYQKIFDNMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA 480
EWDEFK LD+QKIFDNMQKPAFVFDGRN+++ +KLREIGFIVYSIGKPLD WLKDMPAVA
Sbjct: 421 EWDEFKNLDFQKIFDNMQKPAFVFDGRNIMNLQKLREIGFIVYSIGKPLDDWLKDMPAVA 480
>AT5G39320.1 | chr5:15743254-15744696 FORWARD LENGTH=481
Length = 480
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/478 (87%), Positives = 449/478 (93%)
Query: 1 MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKE 60
MVKICCIGAGYVGGPTMAVIALKCP IEV VVDIS PRI+AWNS+QLPIYEPGLD++VK+
Sbjct: 1 MVKICCIGAGYVGGPTMAVIALKCPDIEVAVVDISVPRINAWNSDQLPIYEPGLDDIVKQ 60
Query: 61 CRGRNLFFSTDVEKHVAEANIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 120
CRG+NLFFSTDVEKHV EA+I+FVSVNTPTKT GLGAGKAADLTYWESAARMIADVS SD
Sbjct: 61 CRGKNLFFSTDVEKHVREADIVFVSVNTPTKTTGLGAGKAADLTYWESAARMIADVSVSD 120
Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIEDLFKPDRVLIGGRE 180
KIVVEKSTVPVKTAEAIEKIL HNSKGI +QILSNPEFLAEGTAI DLF PDRVLIGGRE
Sbjct: 121 KIVVEKSTVPVKTAEAIEKILMHNSKGIKFQILSNPEFLAEGTAIADLFNPDRVLIGGRE 180
Query: 181 TPEGKKAVQALKEVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEAT 240
TPEG KAVQ LKEVYA+WVPE +IITTNLWSAELSKLAANAFLAQRISSVNA+SALCE+T
Sbjct: 181 TPEGFKAVQTLKEVYANWVPEGQIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEST 240
Query: 241 GANVAEVAYSVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVI 300
GA+V +V+Y+VG DSRIG KFLNASVGFGGSCFQKDILNLVYIC+CNGLPEVA YWKQVI
Sbjct: 241 GADVTQVSYAVGTDSRIGSKFLNASVGFGGSCFQKDILNLVYICQCNGLPEVAEYWKQVI 300
Query: 301 KINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQI 360
KINDYQK+RFVNR+VSSMFNTVS KK+A+LGFAFKKDTGDTRETPAIDVC GLLGDKAQI
Sbjct: 301 KINDYQKNRFVNRIVSSMFNTVSNKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKAQI 360
Query: 361 SIYDPQVTEDQIQRDLAMSKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKGAHGVCILT 420
SIYDPQVTE+QIQRDL+M KFDWDHP+HLQP SPT KQVSV WDAYEATK AH VC+LT
Sbjct: 361 SIYDPQVTEEQIQRDLSMKKFDWDHPLHLQPMSPTTVKQVSVTWDAYEATKDAHAVCVLT 420
Query: 421 EWDEFKTLDYQKIFDNMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPA 478
EWDEFK+LDYQKIFDNMQKPAF+FDGRN+++ KLREIGFIVYSIGKPLD WLKDMPA
Sbjct: 421 EWDEFKSLDYQKIFDNMQKPAFIFDGRNIMNVNKLREIGFIVYSIGKPLDPWLKDMPA 478
>AT1G26570.1 | chr1:9182801-9184246 FORWARD LENGTH=482
Length = 481
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 399/481 (82%), Positives = 452/481 (93%), Gaps = 1/481 (0%)
Query: 1 MVKICCIGAGYVGGPTMAVIALKCPAIEVVVVDISKPRIDAWNSEQLPIYEPGLDEVVKE 60
MVKICCIGAGYVGGPTMAV+ALKCP IEVVVVDIS+PRI+AWNS++LPIYEPGL++VVK+
Sbjct: 1 MVKICCIGAGYVGGPTMAVMALKCPEIEVVVVDISEPRINAWNSDRLPIYEPGLEDVVKQ 60
Query: 61 CRGRNLFFSTDVEKHVAEANIIFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSD 120
CRG+NLFFSTDVEKHV E++I+FVSVNTPTKT+GLGAGKAADLTYWESAARMIADVSKS
Sbjct: 61 CRGKNLFFSTDVEKHVFESDIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSS 120
Query: 121 KIVVEKSTVPVKTAEAIEKILTHNSKGINYQILSNPEFLAEGTAIEDLFKPDRVLIGGRE 180
KIVVEKSTVPV+TAEAIEKILTHNSKGI +QILSNPEFLAEGTAI+DL+ PDRVLIGGR+
Sbjct: 121 KIVVEKSTVPVRTAEAIEKILTHNSKGIEFQILSNPEFLAEGTAIKDLYNPDRVLIGGRD 180
Query: 181 TPEGKKAVQALKEVYAHWVPEDRIITTNLWSAELSKLAANAFLAQRISSVNAISALCEAT 240
T G+KA++AL++VYAHWVP ++II TNLWSAELSKLAANAFLAQRISSVNA+SALCEAT
Sbjct: 181 TAAGQKAIKALRDVYAHWVPVEQIICTNLWSAELSKLAANAFLAQRISSVNAMSALCEAT 240
Query: 241 GANVAEVAYSVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVI 300
GA+V +VA++VG D+RIGPKFLNASVGFGGSCFQKDILNL+YICECNGLPE ANYWKQV+
Sbjct: 241 GADVTQVAHAVGTDTRIGPKFLNASVGFGGSCFQKDILNLIYICECNGLPEAANYWKQVV 300
Query: 301 KINDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQI 360
K+NDYQK RF NRVVSSMFNTVSGKKIA+LGFAFKKDTGDTRETPAIDVC+ L+ DKA++
Sbjct: 301 KVNDYQKIRFANRVVSSMFNTVSGKKIAILGFAFKKDTGDTRETPAIDVCNRLVADKAKL 360
Query: 361 SIYDPQVTEDQIQRDLAMSKFDWDHPMHLQPTSPTAF-KQVSVVWDAYEATKGAHGVCIL 419
SIYDPQV E+QI+RDL+M++FDWDHP+ LQ +QV+VV DAYEATK AHG+C+L
Sbjct: 361 SIYDPQVLEEQIRRDLSMARFDWDHPVPLQQIKAEGISEQVNVVSDAYEATKDAHGLCVL 420
Query: 420 TEWDEFKTLDYQKIFDNMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAV 479
TEWDEFK+LD++KIFDNMQKPAFVFDGRNVVDA KLREIGFIVYSIGKPLD+WLKDMPAV
Sbjct: 421 TEWDEFKSLDFKKIFDNMQKPAFVFDGRNVVDAVKLREIGFIVYSIGKPLDSWLKDMPAV 480
Query: 480 A 480
A
Sbjct: 481 A 481
>AT3G01010.1 | chr3:4342-4818 FORWARD LENGTH=159
Length = 158
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 131/163 (80%), Positives = 143/163 (87%), Gaps = 5/163 (3%)
Query: 318 MFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCHGLLGDKAQISIYDPQVTEDQIQRDLA 377
MFNTVS KKI VL FAFKKDT RETPAIDVC GLLGDKA+ISIYDPQVTE+QIQRDL
Sbjct: 1 MFNTVSNKKIVVLEFAFKKDT---RETPAIDVCKGLLGDKARISIYDPQVTEEQIQRDLT 57
Query: 378 MSKFDWDHPMHLQPTSPTAFKQVSVVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNM 437
M+ FDWDHP+HLQP SPT KQVSV WDAY ATK AHG+C+LTEWDE+KTLDY++IF+NM
Sbjct: 58 MNTFDWDHPLHLQPMSPTTVKQVSVAWDAYAATKDAHGICLLTEWDEYKTLDYERIFENM 117
Query: 438 QKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA 480
QKPAFVFDGRNV DAEKLR+IGFIVYSIGKPLD W MPA+A
Sbjct: 118 QKPAFVFDGRNVFDAEKLRKIGFIVYSIGKPLDQW--HMPALA 158
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,288,610
Number of extensions: 422575
Number of successful extensions: 993
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 991
Number of HSP's successfully gapped: 5
Length of query: 480
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 378
Effective length of database: 8,310,137
Effective search space: 3141231786
Effective search space used: 3141231786
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)