BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0441300 Os12g0441300|J065060F04
(124 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35160.1 | chr4:16730989-16732808 REVERSE LENGTH=383 70 2e-13
AT4G35150.1 | chr4:16726948-16728531 REVERSE LENGTH=326 64 2e-11
AT1G63140.2 | chr1:23417517-23418875 FORWARD LENGTH=382 64 2e-11
AT1G51990.1 | chr1:19330949-19332667 FORWARD LENGTH=364 64 3e-11
AT1G77520.1 | chr1:29130557-29132007 FORWARD LENGTH=382 62 8e-11
AT1G62900.1 | chr1:23297792-23298536 FORWARD LENGTH=206 62 1e-10
AT1G77530.1 | chr1:29136037-29137423 FORWARD LENGTH=382 60 2e-10
AT1G33030.1 | chr1:11964885-11966212 REVERSE LENGTH=353 60 3e-10
AT5G53810.1 | chr5:21850329-21852762 REVERSE LENGTH=379 59 6e-10
AT5G54160.1 | chr5:21982075-21984167 FORWARD LENGTH=364 59 7e-10
AT1G21110.1 | chr1:7390110-7391419 REVERSE LENGTH=374 52 6e-08
AT1G21100.1 | chr1:7386991-7388318 REVERSE LENGTH=374 52 7e-08
AT1G21130.1 | chr1:7399170-7400470 REVERSE LENGTH=374 52 7e-08
AT5G37170.1 | chr5:14712811-14714303 FORWARD LENGTH=335 50 4e-07
AT1G21120.1 | chr1:7395331-7396640 REVERSE LENGTH=374 49 6e-07
AT1G76790.1 | chr1:28822355-28823630 REVERSE LENGTH=368 48 1e-06
AT3G53140.1 | chr3:19695692-19697355 FORWARD LENGTH=360 48 1e-06
>AT4G35160.1 | chr4:16730989-16732808 REVERSE LENGTH=383
Length = 382
Score = 70.5 bits (171), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 11/111 (9%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSP-------DQKHIE 74
++ +W++HDWGD +C+K+LKN K+A+P GKV+I++ V+ D+K
Sbjct: 272 IFIKWVLHDWGDKDCIKILKNCKEAVPPNI--GKVLIVESVIGENKKTMIVDERDEKLEH 329
Query: 75 LQALFGAYMM--LINGVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVY 123
++ + MM G ER KEW V EAGF+ Y++ + +S+I Y
Sbjct: 330 VRLMLDMVMMAHTSTGKERTLKEWDFVLKEAGFARYEVRDIDDVQSLIIAY 380
>AT4G35150.1 | chr4:16726948-16728531 REVERSE LENGTH=326
Length = 325
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
Query: 25 QWIMHDWGDDECVKVLKNAKKAI-PSKDAGGKVIIIDVVVR-------AGSPDQK--HIE 74
+W++HDWGD +C+K+LKN K+A+ P+ GKV+I++ V+ A D K H+
Sbjct: 218 KWVLHDWGDKDCIKILKNCKEAVLPNI---GKVLIVECVIGEKKNTMIAEERDDKLEHVR 274
Query: 75 LQALFGAYMMLINGVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVY 123
LQ + G ER KEW V EAGF+ Y++ +S+I Y
Sbjct: 275 LQLDMVMMVHTSTGKERTLKEWDFVLTEAGFARYEVRDFDDVQSLIIAY 323
>AT1G63140.2 | chr1:23417517-23418875 FORWARD LENGTH=382
Length = 381
Score = 63.5 bits (153), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
++ +WI+HDW D++CVK+LKN K++P K GKVII++VV P I +FG
Sbjct: 279 IFMKWILHDWTDEDCVKILKNYWKSLPEK---GKVIIVEVVT-PEEPKINDISSNIVFGM 334
Query: 82 YMMLI----NGVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVY 123
M+++ G ER +++ + ++GF +II S+IE++
Sbjct: 335 DMLMLAVSSGGKERSLSQFETLASDSGFLRCEIICHAFSYSVIELH 380
>AT1G51990.1 | chr1:19330949-19332667 FORWARD LENGTH=364
Length = 363
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 21 LLYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFG 80
++ +WI+HDW D++CV++LKN KKA+P G++I+I+++V + +L
Sbjct: 259 VILMKWILHDWNDEKCVEILKNCKKALPET---GRIIVIEMIVPREVSETDLATKNSLSA 315
Query: 81 AYMML---INGVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVYP 124
M+ G ER +KE++ + EAGF KII IIE+YP
Sbjct: 316 DLTMMSLTSGGKERTKKEFEDLAKEAGFKLPKIIYGAYSYWIIELYP 362
>AT1G77520.1 | chr1:29130557-29132007 FORWARD LENGTH=382
Length = 381
Score = 61.6 bits (148), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
++ +WI+HDWGD++C+K+LKN K++P K GK+II++ V P + +F
Sbjct: 279 VFMKWILHDWGDEDCIKILKNCWKSLPEK---GKIIIVEFVT-PKEPKGGDLSSNTVFAM 334
Query: 82 YMMLIN----GVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVY 123
++++ G ER +++ + +GF +II + S+IE +
Sbjct: 335 DLLMLTQCSGGKERSLSQFENLAFASGFLRCEIICLAYSYSVIEFH 380
>AT1G62900.1 | chr1:23297792-23298536 FORWARD LENGTH=206
Length = 205
Score = 61.6 bits (148), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 8/106 (7%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
++ +WI+HDW D++CVK+LKN K++P K GKVII++VV P I +FG
Sbjct: 103 IFMKWILHDWTDEDCVKILKNYWKSLPEK---GKVIIVEVVT-PEEPKINDISSNIVFGM 158
Query: 82 YMMLI----NGVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVY 123
M+++ G ER +++ + ++GF +II S+IE++
Sbjct: 159 DMLMLAVSSGGKERSLSQFETLASDSGFLRCEIICHAFSYSVIELH 204
>AT1G77530.1 | chr1:29136037-29137423 FORWARD LENGTH=382
Length = 381
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 8/106 (7%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
++ +WI+HDWGD++C+K+LKN K++P K GKVII++++ P + G
Sbjct: 279 IFMKWILHDWGDEDCIKILKNCWKSLPEK---GKVIIVEMITPM-EPKPNDFSCNTVLGM 334
Query: 82 YMMLIN----GVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVY 123
++++ G ER +++ + +GF +II + S+IE +
Sbjct: 335 DLLMLTQCSGGKERSLSQFENLAFASGFLLCEIICLSYSYSVIEFH 380
>AT1G33030.1 | chr1:11964885-11966212 REVERSE LENGTH=353
Length = 352
Score = 59.7 bits (143), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
++ +W++H W DD CVK+L N +++PS GKVI++D+V+ D F
Sbjct: 249 IFMKWMLHSWDDDHCVKILSNCYQSLPSN---GKVIVVDMVIPEFPGDTLLDRSLFQFEL 305
Query: 82 YMMLIN--GVERDEKEWKKVFIEAGFSGYKI 110
+MM +N G ER +KE++ + AGFS ++
Sbjct: 306 FMMNMNPSGKERTKKEFEILARLAGFSNVQV 336
>AT5G53810.1 | chr5:21850329-21852762 REVERSE LENGTH=379
Length = 378
Score = 58.9 bits (141), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 12/108 (11%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVV--VRAGSPDQKHIELQALF 79
++ +WI+HDW D++CV +LKN K++ + GK+II+++V V A S D I +F
Sbjct: 276 IFMKWILHDWTDEQCVAILKNCWKSL---EENGKLIIVEMVTPVEAKSGD---ICSNIVF 329
Query: 80 GAYMMLIN----GVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVY 123
G M ++ G ERD E++ + +GFS I+ + S+IE+Y
Sbjct: 330 GMDMTMLTQCSGGKERDLYEFENLAYASGFSRCAIVCAVYPFSVIEIY 377
>AT5G54160.1 | chr5:21982075-21984167 FORWARD LENGTH=364
Length = 363
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
++ +WI HDW D+ CVK LKN +++P GKVI+ + ++ +PD Q +
Sbjct: 260 IFMKWICHDWSDEHCVKFLKNCYESLPED---GKVILAECILPE-TPDSSLSTKQVVHVD 315
Query: 82 YMMLIN---GVERDEKEWKKVFIEAGFSGYKII 111
+ML + G ER EKE++ + +GF G K++
Sbjct: 316 CIMLAHNPGGKERTEKEFEALAKASGFKGIKVV 348
>AT1G21110.1 | chr1:7390110-7391419 REVERSE LENGTH=374
Length = 373
Score = 52.4 bits (124), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 14/87 (16%)
Query: 27 IMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKH---IELQALFGAYM 83
I+HDW D++CVK+LKN K++P GKV++I++V +PD+ I F M
Sbjct: 276 ILHDWTDEDCVKILKNCWKSLPQN---GKVVVIELV----TPDEAENGDINANIAFDMDM 328
Query: 84 MLIN----GVERDEKEWKKVFIEAGFS 106
++ G ER E++ + +GFS
Sbjct: 329 LMFTQCSGGKERSRAEFEALAAASGFS 355
>AT1G21100.1 | chr1:7386991-7388318 REVERSE LENGTH=374
Length = 373
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 14/92 (15%)
Query: 27 IMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKH---IELQALFGAYM 83
I+HDW D++CVK+LKN K++P GKV++I++V +PD+ I F M
Sbjct: 276 ILHDWTDEDCVKILKNCWKSLPEN---GKVVVIELV----TPDEAENGDINANIAFDMDM 328
Query: 84 MLIN----GVERDEKEWKKVFIEAGFSGYKII 111
++ G ER E++ + +GF+ K +
Sbjct: 329 LMFTQCSGGKERSRAEFEALAAASGFTHCKFV 360
>AT1G21130.1 | chr1:7399170-7400470 REVERSE LENGTH=374
Length = 373
Score = 52.0 bits (123), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 14/92 (15%)
Query: 27 IMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKH---IELQALFGAYM 83
I+HDW D++CVK+LKN K++P GKV++I++V +PD+ I F M
Sbjct: 276 ILHDWTDEDCVKILKNCWKSLPES---GKVVVIELV----TPDEAENGDINANIAFDMDM 328
Query: 84 MLIN----GVERDEKEWKKVFIEAGFSGYKII 111
++ G ER E++ + +GF+ K +
Sbjct: 329 LMFTQCSGGKERSRAEFEALAAASGFTHCKFV 360
>AT5G37170.1 | chr5:14712811-14714303 FORWARD LENGTH=335
Length = 334
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
++ + I+ DW D +CVK+L N K++P K GKVII+D+V P I + +FG
Sbjct: 232 IFMRRILRDWNDKDCVKILTNCWKSLPEK---GKVIIVDMVA-PSEPKSDDIFSKVVFGT 287
Query: 82 YMMLIN----GVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIEVY 123
M+++ G R +++ + +GF ++ + S+IE +
Sbjct: 288 DMLMLTQCSCGKVRSFAQFEALASASGFHKCEVSGLAYTYSVIEFH 333
>AT1G21120.1 | chr1:7395331-7396640 REVERSE LENGTH=374
Length = 373
Score = 48.9 bits (115), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 27 IMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKH---IELQALFGAYM 83
I+HDW D++CVK+LKN K++P GKV++I++V +PD+ I F M
Sbjct: 276 ILHDWTDEDCVKILKNCWKSLPEN---GKVVVIELV----TPDEAENGDINANIAFDMDM 328
Query: 84 MLIN----GVERDEKEWKKVFIEAGFSGYKII 111
++ G ER E++ + + F+ K +
Sbjct: 329 LMFTQCSGGKERSRAEFEALAAASCFTHCKFV 360
>AT1G76790.1 | chr1:28822355-28823630 REVERSE LENGTH=368
Length = 367
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
+ + I+HDW D++C K+LKN KA+P GKVI+++VV + ++ I A
Sbjct: 263 ILLKRILHDWTDEDCEKILKNCWKALPEN---GKVIVMEVVTPDEADNRDVISNIAFDMD 319
Query: 82 YMMLIN---GVERDEKEWKKVFIEAGF 105
+ML G ER E+ + +GF
Sbjct: 320 LLMLTQLSGGKERSRAEYVAMAANSGF 346
>AT3G53140.1 | chr3:19695692-19697355 FORWARD LENGTH=360
Length = 359
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 22 LYFQWIMHDWGDDECVKVLKNAKKAIPSKDAGGKVIIIDVVVRAGSPDQKHIELQALFGA 81
++ +W++ W D+EC +++KN A+P GGK+I + V+ + D+ H L G
Sbjct: 257 IFMKWVLTTWTDEECKQIMKNCYNALP---VGGKLIACEPVLPKET-DESHRTRALLEGD 312
Query: 82 -YMMLI---NGVERDEKEWKKVFIEAGFSGYKIIPVLGFRSIIE 121
++M I G R E+E+ ++ + AGF ++ + F +I+E
Sbjct: 313 IFVMTIYRTKGKHRTEEEFIELGLSAGFPTFRPFYIDYFYTILE 356
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.144 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,892,522
Number of extensions: 109984
Number of successful extensions: 364
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 356
Number of HSP's successfully gapped: 17
Length of query: 124
Length of database: 11,106,569
Length adjustment: 86
Effective length of query: 38
Effective length of database: 8,748,793
Effective search space: 332454134
Effective search space used: 332454134
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 105 (45.1 bits)