BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0288400 Os12g0288400|AK071030
(546 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14420.1 | chr5:4648355-4650563 REVERSE LENGTH=469 552 e-157
AT3G01650.1 | chr3:242734-245062 FORWARD LENGTH=490 530 e-150
AT1G67800.2 | chr1:25421029-25423297 REVERSE LENGTH=454 512 e-145
AT5G63970.1 | chr5:25607006-25608916 REVERSE LENGTH=368 435 e-122
AT1G79380.1 | chr1:29860812-29863023 FORWARD LENGTH=402 418 e-117
AT1G08860.1 | chr1:2842153-2846138 FORWARD LENGTH=585 92 1e-18
AT5G07300.1 | chr5:2299996-2303040 FORWARD LENGTH=587 89 6e-18
AT5G61900.1 | chr5:24855908-24859150 REVERSE LENGTH=579 88 1e-17
>AT5G14420.1 | chr5:4648355-4650563 REVERSE LENGTH=469
Length = 468
Score = 552 bits (1423), Expect = e-157, Method: Compositional matrix adjust.
Identities = 274/390 (70%), Positives = 312/390 (80%), Gaps = 14/390 (3%)
Query: 162 KRPKLERKYSKIVDQYRSLDEVIEALAQAGLESSNLIIGIDFTKSNEWTGKRSFNGMSLH 221
+ +LERKYSKI D Y SL++V EALA+AGLESSNLI+GIDFTKSNEWTG RSFN SLH
Sbjct: 88 NKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRKSLH 147
Query: 222 HIGDSPNPYEQAITIIGQTLSAFDEDNLIPCYGFGDASTHDQDVFAFYPDERPCNGFQEA 281
IG SPNPYEQAITIIG+TL+AFDEDNLIPCYGFGDASTHDQDVF+F ++R CNGF+E
Sbjct: 148 FIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSEDRFCNGFEEV 207
Query: 282 LARYREIVPHLRLSGPTSFSPIIEMATTIVEQSGGQYHVLVIIADGQVTRSVDTEFGQLS 341
L+RY+EIVP L+L+GPTSF+PII+MA TIVEQSGGQYHVLVIIADGQVTRSVDTE GQLS
Sbjct: 208 LSRYKEIVPQLKLAGPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTENGQLS 267
Query: 342 TQEQMTVDAIVQASEFPLSIILVGVGDGPWDMMKEFDDNIPARSFDNFQFVNFTXXXXXX 401
QEQ TVDAIVQAS+ PLSI+LVGVGDGPWDMM+EFDDNIPAR+FDNFQFVNFT
Sbjct: 268 PQEQKTVDAIVQASKLPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMAKN 327
Query: 402 XXXXXXETEFALSALMEIPLQYKATLELGILGRRFAKSPERVPLPPPF----ASYNTISR 457
ETEFALSALMEIP QYKAT+EL +LGRR PER PLPPP +SYN+
Sbjct: 328 KAQSLKETEFALSALMEIPQQYKATIELNLLGRRNGYIPERFPLPPPMRGGSSSYNS--- 384
Query: 458 AAPSRANSFR-SMPSHPRDEAPVDSAITASVTSPPSVDARAAEPQLCPVCLSKPRDMAFG 516
PSR SF+ S+P HP + V S+ T + A++ QLCP+CLS P+DMAFG
Sbjct: 385 PKPSRLPSFKPSVPPHPTEGYHVRSSPVPPPT------SSASDNQLCPICLSNPKDMAFG 438
Query: 517 CGHQTCAECGPQVEHCPICRRPIDTRVKLY 546
CGHQTC ECGP ++ CPICR PI TR+KLY
Sbjct: 439 CGHQTCCECGPDLQMCPICRAPIQTRIKLY 468
>AT3G01650.1 | chr3:242734-245062 FORWARD LENGTH=490
Length = 489
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 260/385 (67%), Positives = 301/385 (78%), Gaps = 19/385 (4%)
Query: 163 RPKLERKYSKIVDQYRSLDEVIEALAQAGLESSNLIIGIDFTKSNEWTGKRSFNGMSLHH 222
R K +R+YSKI D Y SL +V EAL +AGLESSNLI+GIDFTKSNEWTG +SFN SLHH
Sbjct: 123 RKKFDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHH 182
Query: 223 IGDSPNPYEQAITIIGQTLSAFDEDNLIPCYGFGDASTHDQDVFAFYPDERPCNGFQEAL 282
+ ++PNPYEQAITIIG+TL+AFDEDNLIPCYGFGDASTHDQDVF+FYP+ R CNGF+E L
Sbjct: 183 LSNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVL 242
Query: 283 ARYREIVPHLRLSGPTSFSPIIEMATTIVEQSGGQYHVLVIIADGQVTRSVDTEFGQLST 342
ARYREIVP L+L+GPTSF+PIIEMA T+VEQS GQYHVLVIIADGQVTRSVDTE G+LS
Sbjct: 243 ARYREIVPQLKLAGPTSFAPIIEMAMTVVEQSSGQYHVLVIIADGQVTRSVDTEHGRLSP 302
Query: 343 QEQMTVDAIVQASEFPLSIILVGVGDGPWDMMKEFDDNIPARSFDNFQFVNFTXXXXXXX 402
QEQ TVDAIV+AS PLSI+LVGVGDGPWDMM+EFDDNIPAR+FDNFQFVNFT
Sbjct: 303 QEQKTVDAIVKASTLPLSIVLVGVGDGPWDMMQEFDDNIPARAFDNFQFVNFTEIMSKNK 362
Query: 403 XXXXXETEFALSALMEIPLQYKATLELGILGRRFAKSPERVPLPPPFASYNTISRAAPSR 462
ETEFALSALMEIP QYKAT+EL +LG R P+R+PLPPP + S + SR
Sbjct: 363 DQSRKETEFALSALMEIPPQYKATIELNLLGVRNGNIPQRIPLPPPV---QSGSSFSSSR 419
Query: 463 ANSFR-SMPSHPRDEAPVDSAITASVTSPPSVDARAAEPQLCPVCLSKPRDMAFGCGHQT 521
+F S+P +P + + S A + QLCP+CLS P++MAFGCGHQT
Sbjct: 420 IPNFEPSVPPYPFESKQMSS---------------ADDIQLCPICLSNPKNMAFGCGHQT 464
Query: 522 CAECGPQVEHCPICRRPIDTRVKLY 546
C ECGP ++ CPICR PI TR+KLY
Sbjct: 465 CCECGPDLKVCPICRAPIQTRIKLY 489
>AT1G67800.2 | chr1:25421029-25423297 REVERSE LENGTH=454
Length = 453
Score = 512 bits (1318), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/388 (64%), Positives = 292/388 (75%), Gaps = 11/388 (2%)
Query: 160 GGKRPK-LERKYSKIVDQYRSLDEVIEALAQAGLESSNLIIGIDFTKSNEWTGKRSFNGM 218
G + PK LERKYS+I D YRS+DEV AL+ AGLESSNLI+GID TKSNEWTG RSF
Sbjct: 76 GRQTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGRK 135
Query: 219 SLHHIGDSPNPYEQAITIIGQTLSAFDEDNLIPCYGFGDASTHDQDVFAFYPDERPCNGF 278
SLH IG +PNPY+QAI+IIG+TLS FDEDNLIPCYGFGDA+THDQDVF+F P++ CNGF
Sbjct: 136 SLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGFGDATTHDQDVFSFNPNDTYCNGF 195
Query: 279 QEALARYREIVPHLRLSGPTSFSPIIEMATTIVEQSGGQYHVLVIIADGQVTRSVDTEFG 338
+E L YREIVP LRLSGPTSF+PIIE A TIVE+SGGQYHVL+IIADGQVTRSVDT+ G
Sbjct: 196 EEVLMCYREIVPQLRLSGPTSFAPIIERAMTIVEESGGQYHVLLIIADGQVTRSVDTDNG 255
Query: 339 QLSTQEQMTVDAIVQASEFPLSIILVGVGDGPWDMMKEFDDNIPARSFDNFQFVNFTXXX 398
S QEQ T+DAIV+ASE+PLSI+LVGVGDGPWD M++FDDNIPAR+FDNFQFVNFT
Sbjct: 256 GFSPQEQQTIDAIVRASEYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTDIM 315
Query: 399 XXXXXXXXXETEFALSALMEIPLQYKATLELGILGRRFAKSPERVPLPPPFASYNTISRA 458
E EFALSALMEIP QYKATLELG+LG+R P+R+ LPPP + A
Sbjct: 316 SKNIDPARKEAEFALSALMEIPSQYKATLELGLLGQRTGHCPDRIALPPP-------TYA 368
Query: 459 APSRANSFRSMPSHPRDEAPVDSAITASVTSPPSVDARAAEPQLCPVCLSKPRDMAFGCG 518
S NS R+ S P D+ ++ ++PPS ++ Q CPVCL ++MAF CG
Sbjct: 369 TQSMRNSPRTSRSTSFQNKPYDNGVS---STPPSTTHNESQQQFCPVCLVSAKNMAFNCG 425
Query: 519 HQTCAECGPQVEHCPICRRPIDTRVKLY 546
HQTCA CG + CPICR I R+KLY
Sbjct: 426 HQTCAGCGEDLHVCPICRSSISVRIKLY 453
>AT5G63970.1 | chr5:25607006-25608916 REVERSE LENGTH=368
Length = 367
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/382 (56%), Positives = 266/382 (69%), Gaps = 21/382 (5%)
Query: 165 KLERKYSKIVDQYRSLDEVIEALAQAGLESSNLIIGIDFTKSNEWTGKRSFNGMSLHHIG 224
K ++ S I D + SLD+VI +L +AGLESSNLI+GIDFTKSNEWTG+ SFN SLH IG
Sbjct: 6 KRNQQPSYIADHFSSLDQVITSLREAGLESSNLILGIDFTKSNEWTGRYSFNRKSLHAIG 65
Query: 225 DSPNPYEQAITIIGQTLSAFDEDNLIPCYGFGDASTHDQDVFAFYPDERPCNGFQEALAR 284
NPYE+AI+IIG+TLS FDED+LIPC+GFGD +T DQ VF+FYP+ + C+G + A+ R
Sbjct: 66 KRQNPYEKAISIIGRTLSPFDEDDLIPCFGFGDVTTRDQYVFSFYPENKSCDGLENAVKR 125
Query: 285 YREIVPHLRLSGPTSFSPIIEMATTIVEQSGGQYHVLVIIADGQVTRSVDTEFGQLSTQE 344
YREIVPHL+LSGPTSF+P+I+ A IVEQ+ QYHVLVIIADGQVTR+ D G+LS QE
Sbjct: 126 YREIVPHLKLSGPTSFAPVIDAAINIVEQNNMQYHVLVIIADGQVTRNPDVPLGRLSPQE 185
Query: 345 QMTVDAIVQASEFPLSIILVGVGDGPWDMMKEFDDNIPARSFDNFQFVNFTXXXXXXXXX 404
+ T+++I+ AS +PLSI+LVGVGDGPWD MK+FDDNIP R FDNFQFVNFT
Sbjct: 186 EATMNSIMAASHYPLSIVLVGVGDGPWDTMKQFDDNIPHREFDNFQFVNFTKIMSEHKDA 245
Query: 405 XXXETEFALSALMEIPLQYKATLELGILGRRFAKSPERVPLPPPFASYNTISRAAPSRAN 464
E FAL+ALMEIP QYKATL L R + + PLPPP R N
Sbjct: 246 AKKEAAFALAALMEIPFQYKATLSLNRKPVRSSHQHHK-PLPPP--------PEVIERDN 296
Query: 465 SFRSMPSHPRDEAPVDSAITASVTSPPSVDARAAEPQLCPVCLSKPRDMAFGCGHQTCAE 524
+ RS+P+ + A + S T P +CP+CL+ P+DMAF CGH TC E
Sbjct: 297 AVRSVPNQMTETAEKSDRLAPS-TVP-----------VCPICLTNPKDMAFSCGHTTCKE 344
Query: 525 CGPQVEHCPICRRPIDTRVKLY 546
CG + CP+CR+PI TR++LY
Sbjct: 345 CGVVITTCPLCRQPITTRIRLY 366
>AT1G79380.1 | chr1:29860812-29863023 FORWARD LENGTH=402
Length = 401
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/380 (53%), Positives = 263/380 (69%), Gaps = 29/380 (7%)
Query: 167 ERKYSKIVDQYRSLDEVIEALAQAGLESSNLIIGIDFTKSNEWTGKRSFNGMSLHHIGDS 226
++KY+ I D++ SLD+V +AL +AGLESSNLI+G+DFTKSNEWTGK SF+G LH +G++
Sbjct: 50 KKKYALIPDRFSSLDQVSKALREAGLESSNLILGVDFTKSNEWTGKTSFDGKCLHALGET 109
Query: 227 PNPYEQAITIIGQTLSAFDEDNLIPCYGFGDASTHDQDVFAFYPDERPCNGFQEALARYR 286
NPYE+AI +IGQTL+ FDEDNLIPC+GFGD++THD++VF F+ D PC+GF+E LA Y+
Sbjct: 110 SNPYEKAIFVIGQTLAPFDEDNLIPCFGFGDSTTHDEEVFGFHSDNSPCHGFEEVLACYK 169
Query: 287 EIVPHLRLSGPTSFSPIIEMATTIVEQSGGQYHVLVIIADGQVTRSVDTEFGQLSTQEQM 346
I P+LRLSGPTS+ P+I+ A IVE++ GQ+HVLVI+ADGQVTR D G+LS QE+
Sbjct: 170 RIAPNLRLSGPTSYGPLIDAAVDIVEKNNGQFHVLVIVADGQVTRGTDMAEGELSQQEKT 229
Query: 347 TVDAIVQASEFPLSIILVGVGDGPWDMMKEFDDNIPARSFDNFQFVNFTXXXXXXXXXXX 406
T+DAIV AS + LSI+LVGVGDGPW+ M++FDD IP R FDNFQFVNFT
Sbjct: 230 TIDAIVNASSYALSIVLVGVGDGPWEDMRKFDDKIPKREFDNFQFVNFTEIMTRNSPESA 289
Query: 407 XETEFALSALMEIPLQYKATLELGILGRRFAKSPERVPLPPPFASYNTISRAAPSRANSF 466
ET FAL+ALMEIP QY+A +EL +LG++ + VP PPP + PS
Sbjct: 290 KETAFALAALMEIPFQYQAAIELRLLGKQTGLAKTIVPRPPPIPYTPPTNAELPS----- 344
Query: 467 RSMPSHPRDEAPVDSAITASVTSPPSVDARAAEPQLCPVCLSKPRDMAFGCGHQTCAECG 526
TAS SP + Q CP+CL+ +D+AF CGH TC +CG
Sbjct: 345 -----------------TASPASP-------EQTQSCPICLTNRKDVAFSCGHMTCGDCG 380
Query: 527 PQVEHCPICRRPIDTRVKLY 546
++ +CPICR I R+KLY
Sbjct: 381 SKISNCPICRVRITNRLKLY 400
>AT1G08860.1 | chr1:2842153-2846138 FORWARD LENGTH=585
Length = 584
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 113/236 (47%), Gaps = 37/236 (15%)
Query: 164 PKLERKYSKIVDQYRSLDEVIEALAQAGLE------SSNLIIGIDFTKSNEWTGKRSFNG 217
P L +K++ +D +E + + L+ N ++ +DFT SN S
Sbjct: 306 PSLSHGRNKVLKGQLIVDRYVEKVQYSFLDYISSGFELNFMVAVDFTASNGDPRTPS--- 362
Query: 218 MSLHHIGDSP--NPYEQAITIIGQTLSAFDEDNLIPCYGFGDASTHDQDVFAF------Y 269
SLH+I S N Y+QAI +G+ + +D D P +GFG ++ AF Y
Sbjct: 363 -SLHYIDPSGRLNSYQQAIMEVGEVIQFYDSDKRFPAWGFGGRTSDGSVSHAFNLNGASY 421
Query: 270 PDERPCNGFQEALARYREIVPHLRLSGPTSFSPIIEMATTIVEQSGGQ----YHVLVIIA 325
DE G + + Y + ++ L+GPT FS +++ A QS Q Y VL+II
Sbjct: 422 GDE--VVGVEGIMVAYASALRNVSLAGPTLFSNVVDKAAHTASQSLSQNSPKYFVLLIIT 479
Query: 326 DGQVTRSVDTEFGQLSTQEQMTVDAIVQASEFPLSIILVGVGDGPWDMMKEFD-DN 380
DG +T T VDA+V+AS+ PLS+++VGVG+ + M+ D DN
Sbjct: 480 DGVLTDMAGT------------VDALVRASDLPLSVLIVGVGNTDFKQMEMLDADN 523
>AT5G07300.1 | chr5:2299996-2303040 FORWARD LENGTH=587
Length = 586
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 112/233 (48%), Gaps = 32/233 (13%)
Query: 159 VGGKRPKLERKYSKIVDQYRSLDE--VIEALAQAGLESSNLIIGIDFTKSNEWTGKRSFN 216
VG K K VD++ + +E LA +G E N ++ IDFT SN G
Sbjct: 307 VGHKHEDRVLKSQLFVDKFTETVQHTFLEYLA-SGFEL-NFMVAIDFTASN---GNPRLP 361
Query: 217 GMSLHHIGDSP--NPYEQAITIIGQTLSAFDEDNLIPCYGFGDASTHDQDV---FAFYPD 271
SLH+I + N Y++AI +G+ L +D D P +GFG A D V F
Sbjct: 362 D-SLHYIDPTGRLNAYQRAIVEVGEVLQFYDSDKRFPAWGFG-ARPIDIPVSHCFNLNGS 419
Query: 272 ERPC--NGFQEALARYREIVPHLRLSGPTSFSPIIEMATTI----VEQSGGQYHVLVIIA 325
C +G Q + Y + ++ +GPT F P+I A TI + QS +Y+VL+II
Sbjct: 420 STYCEVDGIQGIMNAYNGALFNVSFAGPTLFGPVINAAATIASDSLAQSAKKYYVLLIIT 479
Query: 326 DGQVTRSVDTEFGQLSTQEQMTVDAIVQASEFPLSIILVGVGDGPWDMMKEFD 378
DG +T Q T D+IV AS+ PLSI++VGVG + M+ D
Sbjct: 480 DGVIT------------DLQETRDSIVSASDLPLSILIVGVGGADYKEMEVLD 520
>AT5G61900.1 | chr5:24855908-24859150 REVERSE LENGTH=579
Length = 578
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 98/205 (47%), Gaps = 28/205 (13%)
Query: 184 IEALAQAGLESSNLIIGIDFTKSNEWTGKRSFNGMSLHHIGDSP--NPYEQAITIIGQTL 241
+E LA +G E N ++ IDFT SN G SLH+I S N Y++AI +G+ L
Sbjct: 331 LEYLA-SGFEL-NFMVAIDFTASN---GNPRLPD-SLHYIDPSGRLNAYQRAIMDVGEVL 384
Query: 242 SAFDEDNLIPCYGFG----DASTHDQDVFAFYPDERPCNGFQEALARYREIVPHLRLSGP 297
+D D P +GFG DA +G Q + Y + ++ L+GP
Sbjct: 385 QFYDSDKRFPAWGFGARPIDAPVSHCFNLNGSSSYSEVDGIQGIMTSYTSALFNVSLAGP 444
Query: 298 TSFSPIIEMATTIVEQSGGQ----YHVLVIIADGQVTRSVDTEFGQLSTQEQMTVDAIVQ 353
T F P+I A I S Q Y+VL+II DG +T Q T DA+V
Sbjct: 445 TLFGPVINAAAMIASASLAQGSRKYYVLLIITDGVIT------------DLQETKDALVS 492
Query: 354 ASEFPLSIILVGVGDGPWDMMKEFD 378
AS+ PLSI++VGVG + M+ D
Sbjct: 493 ASDLPLSILIVGVGGADFKEMEILD 517
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,376,213
Number of extensions: 368346
Number of successful extensions: 1184
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 1176
Number of HSP's successfully gapped: 8
Length of query: 546
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 443
Effective length of database: 8,282,721
Effective search space: 3669245403
Effective search space used: 3669245403
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 114 (48.5 bits)