BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0238900 Os12g0238900|AK109804
(520 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G18170.1 | chr3:6228393-6229547 FORWARD LENGTH=385 269 3e-72
AT3G18180.1 | chr3:6230270-6231878 FORWARD LENGTH=471 266 2e-71
AT3G10320.1 | chr3:3195441-3197111 REVERSE LENGTH=495 222 4e-58
AT2G41640.1 | chr2:17360654-17362391 FORWARD LENGTH=501 205 6e-53
AT3G57380.1 | chr3:21230002-21231672 FORWARD LENGTH=505 196 3e-50
AT2G03370.1 | chr2:1024714-1026969 REVERSE LENGTH=453 190 1e-48
AT2G03360.2 | chr2:1022287-1024273 REVERSE LENGTH=456 185 6e-47
>AT3G18170.1 | chr3:6228393-6229547 FORWARD LENGTH=385
Length = 384
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 221/408 (54%), Gaps = 51/408 (12%)
Query: 136 PLCDLSDHRTDVCDLAGDIRMDANASAFXXXXXXXXXXXXXTYKVRPYPRKGDATSMGRV 195
P+C RT+ C+L GD+R+ SA T+ +RPY RKGD +M RV
Sbjct: 3 PICT-KLARTEFCELNGDVRVHGK-SATVSAAITFAFSGNSTWHIRPYARKGDTVAMKRV 60
Query: 196 TEITVR--------------------TTAAVVFSISGYTGNLFHDFTDVIVPLYNTAARY 235
E TV+ + A++FS+ GY+ N FHDFTD+++PLY TA R+
Sbjct: 61 REWTVKLEQNADQLENANFSRCVRNHSVPAMIFSLGGYSMNNFHDFTDIVIPLYTTARRF 120
Query: 236 CGDVQLVVTDGNAATRRWLARYGAVLRGLSRHVPLDLXXXXXXXXXXVHCFGHTVVGLRA 295
G+VQ +VT+ + + W+ ++ ++R LS + + + HCF VGL
Sbjct: 121 NGEVQFLVTNKSPS---WINKFKELVRKLSNYEVIYIDEEDE-----THCFSSVTVGLTR 172
Query: 296 H----GELIIDRERSPDGLGMPDFTRFLRRALSLPRDA-PTRPGGGHGDATKPQPRPRLL 350
H EL ID S M DF FLR SL DA TR R R
Sbjct: 173 HREYFKELTIDPSNSE--YSMSDFRSFLRDTYSLRNDAVATRQIRRRRPRILILARGR-- 228
Query: 351 IISRRGTRLLLNTDAVARAAEQVGFEAVASELDMAGADHDDVARVARLVNSFDAVVGVHG 410
+R +NT +ARAA Q+GF+ V +E ++ +A+ A+ VNS D ++GVHG
Sbjct: 229 ------SRAFVNTGEIARAARQIGFKVVVAEANIG------IAKFAQTVNSCDVMLGVHG 276
Query: 411 AGLTNMVFLPPGAAAVQIVPWGGLRWLARADFGEPAVAMGLRYIQYEVAAGESTLKDKYP 470
AGLTNMVFLP A +Q++P GG WLA+ DF +P+ M LRY++Y++A ESTL KY
Sbjct: 277 AGLTNMVFLPENAVVIQVLPIGGFEWLAKTDFEKPSEGMNLRYLEYKIAVEESTLVKKYG 336
Query: 471 RDHEIFTNPTALHKKGFTFMRHTFLNGQDIIVDIDRFKPVLLRALNSL 518
RDHEI +P+A+ K G+ + +L Q++ +DI+RFKPVL++AL L
Sbjct: 337 RDHEIVRDPSAVAKHGWEMFKSVYLVQQNVSIDINRFKPVLVKALELL 384
>AT3G18180.1 | chr3:6230270-6231878 FORWARD LENGTH=471
Length = 470
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/432 (35%), Positives = 230/432 (53%), Gaps = 54/432 (12%)
Query: 106 TAAATGTSPPRHEQPGETTTRADSVDQPRHPLCDLSDH-RTDVCDLAGDIRMDANASAFX 164
T T T+ + E E ++ P+C + + CD++GD+R+ SA
Sbjct: 69 TELTTNTTISKEEVISEC-------NKMEKPICHCNTLGSKEFCDVSGDVRIHGK-SATV 120
Query: 165 XXXXXXXXXXXXTYKVRPYPRKGDATSMGRVTEITVR--------------TTAAVVFSI 210
T+ +RPY RK +M RV E TV+ + A++FS+
Sbjct: 121 LAAVTFAFSGNSTWYMRPYARKDQVPAMKRVREWTVKLVQNASLSRCVRNHSVPAILFSL 180
Query: 211 SGYTGNLFHDFTDVIVPLYNTAARYCGDVQLVVTDGNAATRRWLARYGAVLRGLSRHVPL 270
G++ N FHDFTD+++PLY TA R+ G+VQ +VT+ N W+ ++ ++R LS + +
Sbjct: 181 GGFSLNNFHDFTDIVIPLYTTARRFSGEVQFLVTNKNLL---WINKFKELVRKLSNYEVI 237
Query: 271 DLXXXXXXXXXXVHCFGHTVVGLRAHGELIIDRERSPD----GLGMPDFTRFLRRALSLP 326
+ HCF +VGL H + D+E + D M DF +FLR SL
Sbjct: 238 YIDEEDET-----HCFSSVIVGLNRHRDY--DKELTTDPSNSEYSMSDFRKFLRDTYSLR 290
Query: 327 RDAPTRPGGGHGDATKPQPRPRLLIISRRGTRLLLNTDAVARAAEQVGFEAVASELDMAG 386
A T + +PR+LI+SR +R +N +ARAA Q+GF+ V +E +
Sbjct: 291 NSAVT-----------TRRKPRILILSRSRSRAFVNAGEIARAARQIGFKVVVAEAN--- 336
Query: 387 ADHDDVARVARLVNSFDAVVGVHGAGLTNMVFLPPGAAAVQIVPWGGLRWLARADFGEPA 446
++A A VNS D ++GVHGAG+TNMVFLP A +QI+P GG WLA+ DF P+
Sbjct: 337 ---TEIASFAITVNSCDVMLGVHGAGMTNMVFLPDNAIVIQILPIGGFEWLAKMDFEYPS 393
Query: 447 VAMGLRYIQYEVAAGESTLKDKYPRDHEIFTNPTALHKKGFTFMRHTFLNGQDIIVDIDR 506
M LRY++Y++ A ESTL +Y RDHE +P A+ K+G+ + +L Q++ VDI+R
Sbjct: 394 KGMNLRYLEYKITAEESTLVKQYGRDHEFVRDPLAVAKRGWGTFKSVYLVQQNVSVDINR 453
Query: 507 FKPVLLRALNSL 518
FK VL++AL L
Sbjct: 454 FKLVLVKALELL 465
>AT3G10320.1 | chr3:3195441-3197111 REVERSE LENGTH=495
Length = 494
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/401 (32%), Positives = 208/401 (51%), Gaps = 38/401 (9%)
Query: 138 CDLSDHRTDVCDLAGDIRMDA-NASAFXXXXXXXXXXXXXTYKVRPYPRKGDATSMGRVT 196
CD + +R+D+C + GDIR + ++S F K++PY RK + + M +
Sbjct: 102 CDRTGYRSDICFMKGDIRTHSPSSSIFLYTSNDLTTDQVLQEKIKPYTRKWETSIMETIP 161
Query: 197 EITVRT-----------------TAAVVFSISGYTGNLFHDFTDVIVPLYNTAARYCGDV 239
E+ + T AV+FS GYTGNL+H+F D ++PLY T+ R+ V
Sbjct: 162 ELKLVTKDMKLFGDKRKCEVIHEVPAVLFSTGGYTGNLYHEFNDGLIPLYITSKRFNKKV 221
Query: 240 QLVVTDGNAATRRWLARYGAVLRGLSRHVPLDLXXXXXXXXXXVHCFGHTVVGLRAHGEL 299
V+ + + + W +YG VL LS + +D HCF +VGLR HGEL
Sbjct: 222 VFVIAEYH---KWWEMKYGDVLSQLSDYSLIDFNKDKR-----THCFKEAIVGLRIHGEL 273
Query: 300 IID-RERSPDGLGMPDFTRFLRRALS-----LPRDAPTRPGGGHGDATKPQPRPRLLIIS 353
+D + DG + +F L RA L R R K + RP+L + S
Sbjct: 274 TVDPSQMQDDGTTINEFRNVLDRAYRPRINRLDRLEEQRFHARLAQRRKAK-RPKLALFS 332
Query: 354 RRGTRLLLNTDAVARAAEQVGFEAVASELDMAGADHDDVARVARLVNSFDAVVGVHGAGL 413
R G+R + N D + + A+++GF+ D ++A++ R++NS +VGVHGA +
Sbjct: 333 RTGSRGITNEDLMVKMAQRIGFDIEVLRPDRTT----ELAKIYRVLNSSKVMVGVHGAAM 388
Query: 414 TNMVFLPPGAAAVQIVPWGGLRWLARADFGEPAVAMGLRYIQYEVAAGESTLKDKYPRDH 473
T+ +F+ PG+ +QI+P G W A +GEPA +GL Y Y++ ES+L +KY +D
Sbjct: 389 THFLFMKPGSIFIQIIPLGT-DWAAETYYGEPAKKLGLDYNGYKILPRESSLYEKYDKDD 447
Query: 474 EIFTNPTALHKKGFTFMRHTFLNGQDIIVDIDRFKPVLLRA 514
I +P ++ KKG+ F + +LN Q + +D+ RFK +L+ A
Sbjct: 448 PILKDPNSITKKGWQFTKGIYLNDQKVRLDLHRFKKLLIDA 488
>AT2G41640.1 | chr2:17360654-17362391 FORWARD LENGTH=501
Length = 500
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 202/397 (50%), Gaps = 32/397 (8%)
Query: 138 CDLSDHRTDVCDLAGDIRMDANASAFXXXXXXXXXXXXXTYKVRPYPRKGDATSMGRVTE 197
CD + R+D+C + GD+R ++ +S+ K++PY RK + + M V E
Sbjct: 101 CDRTGLRSDICVMKGDVRTNSASSSIFLFTSSTNNNTKPE-KIKPYTRKWETSVMDTVQE 159
Query: 198 ITVRT----------------TAAVVFSISGYTGNLFHDFTDVIVPLYNTAARYCGDVQL 241
+ + T AV FS GYTGN++H+F D I+PL+ T+ Y V
Sbjct: 160 LNLITKDSNKSSDRVCDVYHDVPAVFFSTGGYTGNVYHEFNDGIIPLFITSQHYNKKVVF 219
Query: 242 VVTDGNAATRRWLARYGAVLRGLSRHVPLDLXXXXXXXXXXVHCFGHTVVGLRAHGELII 301
V+ + + W +YG V+ LS + +D HCF VGLR H EL +
Sbjct: 220 VIVEYHDW---WEMKYGDVVSQLSDYPLVDFNGDTR-----THCFKEATVGLRIHDELTV 271
Query: 302 DRERSPDGLGMPDFTRFLRRALSLPRDAPTRPGG-GHGDATKPQPRPRLLIISRRGT-RL 359
+ + DF L R S + T+ + A + +P+L+I+SR G+ R
Sbjct: 272 NSSLVIGNQTIVDFRNVLDRGYSHRIQSLTQEETEANVTALDFKKKPKLVILSRNGSSRA 331
Query: 360 LLNTDAVARAAEQVGFEAVASELDMAGADHDDVARVARLVNSFDAVVGVHGAGLTNMVFL 419
+LN + + AE+ GF + ++A++ R +N+ D ++GVHGA +T+ +FL
Sbjct: 332 ILNENLLVELAEKTGFNVEV----LRPQKTTEMAKIYRSLNTSDVMIGVHGAAMTHFLFL 387
Query: 420 PPGAAAVQIVPWGGLRWLARADFGEPAVAMGLRYIQYEVAAGESTLKDKYPRDHEIFTNP 479
P +QI+P G W A +GEPA +GL+Y+ Y++A ES+L ++Y +D + +P
Sbjct: 388 KPKTVFIQIIPLGT-DWAAETYYGEPAKKLGLKYVGYKIAPKESSLYEEYGKDDPVIRDP 446
Query: 480 TALHKKGFTFMRHTFLNGQDIIVDIDRFKPVLLRALN 516
+L+ KG+ + + +L GQ++ +D+ RF+ L R+ +
Sbjct: 447 DSLNDKGWEYTKKIYLQGQNVKLDLRRFRETLTRSYD 483
>AT3G57380.1 | chr3:21230002-21231672 FORWARD LENGTH=505
Length = 504
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 199/407 (48%), Gaps = 46/407 (11%)
Query: 138 CDLSDHRTDVCDLAGDIRM-DANASAFXXXXXXXXXXXXXTYKVRPYPRKGDATSMGRVT 196
CD + R+DVC + GD+R A++S F ++PY RK + + M V
Sbjct: 97 CDRTGSRSDVCIMKGDVRTHSASSSVFLFTSLKNKTKITKK--IKPYTRKWETSVMQTVQ 154
Query: 197 EITV----------------------RTTAAVVFSISGYTGNLFHDFTDVIVPLYNTAAR 234
E+ + AV FS GYTGN++H+F D I+PL+ T+
Sbjct: 155 ELNLVYRDEENNSLVVSSVNDICDVFYNVPAVFFSTGGYTGNVYHEFNDGIIPLFITSHH 214
Query: 235 YCGDVQLVVTDGNAATRRWLARYGAVLRGLSRHVPLDLXXXXXXXXXXVHCFGHTVVGLR 294
+ V V+ + ++ W+ +YG ++ LS + P+D HCF +VGL+
Sbjct: 215 FNKKVVFVIVEYHSW---WIMKYGDIVSQLSDYPPVDFNGDKR-----THCFKEAIVGLK 266
Query: 295 AHGELIIDRERSPDGLGMPDFTRFLRRAL-----SLPRDAPTRPGGGHGDATKPQPRPRL 349
H EL ++ + DF L +A L ++ + D K +P L
Sbjct: 267 IHDELTVESSLMLGNKTILDFRNVLDQAYWPRIHGLIQEEELKAANKTEDGFK---KPIL 323
Query: 350 LIISRRGTRLLLNTDAVARAAEQVGFEAVASELDMAGADHDDVARVARLVNSFDAVVGVH 409
+I+SR G+R +LN + AE++GF D ++A++ R +NS D ++GVH
Sbjct: 324 VILSRNGSREILNESLLVELAEEIGFIVHVLRPDKT----TELAKIYRCLNSSDVMIGVH 379
Query: 410 GAGLTNMVFLPPGAAAVQIVPWGGLRWLARADFGEPAVAMGLRYIQYEVAAGESTLKDKY 469
GA +T+++FL P +QI+P G W A +G+PA M L+YI Y++ ES+L D+Y
Sbjct: 380 GAAMTHLLFLKPKTVFIQIIPIGT-EWAAETYYGKPAKKMRLKYIGYKIKPKESSLYDEY 438
Query: 470 PRDHEIFTNPTALHKKGFTFMRHTFLNGQDIIVDIDRFKPVLLRALN 516
D I +P + +KG+ + + +L Q++ +D+ RF+ L RA +
Sbjct: 439 GIDDPIIRDPKSFTQKGWDYTKKIYLERQNVKLDLKRFRKPLSRAYD 485
>AT2G03370.1 | chr2:1024714-1026969 REVERSE LENGTH=453
Length = 452
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 189/408 (46%), Gaps = 48/408 (11%)
Query: 118 EQPGETTTRADSVDQPRHPLCDLSDHRTDVCDLAGDIRMDANASAFXXXXXXXXXXXXXT 177
+QP ETT+ + CD S D+C + G +D
Sbjct: 58 QQPQETTSATIT--------CDRSHTNYDLCSINGSCNLDLKTGTLTLMDPTSAPLVE-- 107
Query: 178 YKVRPYPRKGDATSMGRVTEITVRT--------------TAAVVFSISGYTGNLFHDFTD 223
K+RPYP+K D M R+ E+T+ + A+VFS GYTG+++HD D
Sbjct: 108 -KIRPYPKKADNWIMPRIRELTLTSGPLGLPRSCDITHDLPAIVFSAGGYTGSIYHDLMD 166
Query: 224 VIVPLYNTAARYCGDVQLVVTDGNAATRRWLARYGAVLRGLSRHVPLDLXXXXXXXXXXV 283
+PL+ TA D + NA W+ +Y +L S+H P+ L
Sbjct: 167 GFIPLFITANSVYPDRDFIPVVVNAK-EWWMPKYIDILGTFSKHKPILLLDKESVAT--T 223
Query: 284 HCFGHTVVGLRAHGELIIDRERSPDGLGMPDFTRFLRRALSLPRDAPTRPGGGHGDATKP 343
HCF +VGL H + ID + P+ + DF L +A + P H
Sbjct: 224 HCFTSAIVGLITHWPMTIDPTQIPNSKSLVDFHNLLEKAFTTNISTP----KTH------ 273
Query: 344 QPRPRLLIISRRGT--RLLLNTDAVARAAEQVGFEAVASELDMAGADHDDVARVARLVNS 401
+PRL+++SR G R++LN + E VGFE + + ++ +L+ S
Sbjct: 274 --KPRLMLVSRYGNIGRVILNEQEIKEMLEDVGFEVII----FRPSKTTNLKEAYKLIKS 327
Query: 402 FDAVVGVHGAGLTNMVFLPPGAAAVQIVPWGGLRWLARADFGEPAVAMGLRYIQYEVAAG 461
+VGVHGA LT+++FL PG+ VQ+VP GL W ++ + PA M L Y++Y+V
Sbjct: 328 SHGMVGVHGAALTHLLFLRPGSIFVQVVPL-GLGWASKPCYESPAKTMKLEYLEYKVNVE 386
Query: 462 ESTLKDKYPRDHEIFTNPTALHKKGFTFMR-HTFLNGQDIIVDIDRFK 508
ES+L +KY RD + +P A + + +L QD+ +D++RF+
Sbjct: 387 ESSLIEKYNRDDLVLKDPIAYRGMDWNATKMKVYLKEQDVSLDVNRFR 434
>AT2G03360.2 | chr2:1022287-1024273 REVERSE LENGTH=456
Length = 455
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 182/388 (46%), Gaps = 38/388 (9%)
Query: 138 CDLSDHRTDVCDLAGDIRMDANASAFXXXXXXXXXXXXXTYKVRPYPRKGDATSMGRVTE 197
CD S D+C + G ++ K+RPYPRK + M R+ E
Sbjct: 71 CDRSHTSYDLCSINGSCILNPKTGTLTLMDRTLTTSAPLVEKIRPYPRKSENWIMPRIRE 130
Query: 198 ITVRT--------------TAAVVFSISGYTGNLFHDFTDVIVPLYNTAARYCGDVQLVV 243
+ + + + A+VFS GYTG+++HDF D +PL+ TA D ++
Sbjct: 131 LKLTSGPSDLTRSCDITHDSPAIVFSAGGYTGSIYHDFIDGFIPLFITANSVYPDRDFIL 190
Query: 244 TDGNAATRRWLARYGAVLRGLSRHVPLDLXXXXXXXXXXVHCFGHTVVGLRAHGELIIDR 303
N W+ +Y +L S+H + L HCF VGL +HG + ID
Sbjct: 191 VVVNPK-EWWMPKYIDILGTFSKHKTILLDKENASIT---HCFTSATVGLISHGPMTIDP 246
Query: 304 ERSPDGLGMPDFTRFLRRALSLPRDAPTRPGGGHGDATKPQPRPRLLIISRRGT--RLLL 361
+ P+ + DF L +AL+ P + + +PRL+++ R G R++L
Sbjct: 247 TQIPNSKSLVDFHNLLDKALN-PNLSIIKIN-----------KPRLILVRRYGNIGRVIL 294
Query: 362 NTDAVARAAEQVGFEAVASELDMAGADHDDVARVARLVNSFDAVVGVHGAGLTNMVFLPP 421
N + + E VGFE + + + +L+ S ++GVHGA LT ++FL P
Sbjct: 295 NEEEIREMLEDVGFEVIT----FRPSKTTSLREAYKLIKSSHGMIGVHGAALTQLLFLRP 350
Query: 422 GAAAVQIVPWGGLRWLARADFGEPAVAMGLRYIQYEVAAGESTLKDKYPRDHEIFTNPTA 481
G+ VQIVP GL W+++ F PA AM L Y +Y V ES+L +KY RD + +P A
Sbjct: 351 GSVLVQIVP-VGLGWVSKTCFETPAKAMKLDYTEYRVNVEESSLIEKYSRDDLVLKDPIA 409
Query: 482 LHKKGFTFMR-HTFLNGQDIIVDIDRFK 508
+ + +L QD+ +D++RF+
Sbjct: 410 YRGMDWNVTKMKVYLKDQDVRLDVNRFR 437
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,570,901
Number of extensions: 418001
Number of successful extensions: 939
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 897
Number of HSP's successfully gapped: 7
Length of query: 520
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 417
Effective length of database: 8,282,721
Effective search space: 3453894657
Effective search space used: 3453894657
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 114 (48.5 bits)