BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0197700 Os12g0197700|AK100699
         (682 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23570.1  | chr5:7943621-7945874 FORWARD LENGTH=626            375   e-104
AT3G22430.1  | chr3:7953455-7957605 FORWARD LENGTH=511             56   7e-08

>AT5G23570.1 | chr5:7943621-7945874 FORWARD LENGTH=626
          Length = 625

 Score =  375 bits (962), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/430 (46%), Positives = 281/430 (65%), Gaps = 6/430 (1%)

Query: 248 ASEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPLMN 307
            S+K+  +RK++K  K  F  L+ LS+EQINE  RQWHCPAC+N  G + WY  L PL+ 
Sbjct: 190 VSQKSHGSRKQNKWFKKFFGSLDSLSIEQINEPQRQWHCPACQNGPGAIDWYN-LHPLLA 248

Query: 308 HARTKGSKRVKLHRXXXXXXXXXXYRTGISMASSGEFFGIWKGLREN-TDRPIVWPPVVI 366
           HARTKG++RVKLHR             G S+   GE +G WKGL E+  D  IVWPP+VI
Sbjct: 249 HARTKGARRVKLHRELAEVLEKDLQMRGASVIPCGEIYGQWKGLGEDEKDYEIVWPPMVI 308

Query: 367 IMNTRLEQDKDGKWKGMGNKELLSYFSKYHVKEACHAYGPDGHSGMSALIFEGSAVAYKE 426
           IMNTRL++D + KW GMGN+ELL YF KY    A H+YGP GH GMS L+FE SA  Y E
Sbjct: 309 IMNTRLDKDDNDKWLGMGNQELLEYFDKYEALRARHSYGPQGHRGMSVLMFESSATGYLE 368

Query: 427 AERLHNHFVDQRTDKYAWLNHRIVIPGGKRQLYGFLAEKEDLEAFNRH-HGKDYLKYEMK 485
           AERLH    +   D+ AW   R +  GG RQLYGFLA K+DL+ FN+H  GK  LK+E+K
Sbjct: 369 AERLHRELAEMGLDRIAWGQKRSMFSGGVRQLYGFLATKQDLDIFNQHSQGKTRLKFELK 428

Query: 486 SYNEMVVTQLKQMSEDNQQLNYVKNEMVKTERHSKEVEEALGVETQKLQGAIEDNIILKR 545
           SY EMVV +L+Q+SEDNQQLNY KN++ K  +H+K +EE+L + ++KL+   EDN I+++
Sbjct: 429 SYQEMVVKELRQISEDNQQLNYFKNKLSKQNKHAKVLEESLEIMSEKLRRTAEDNRIVRQ 488

Query: 546 KTKEMLSECVEQMEFNAKFYHEQIERLRKDTEEKENEFERLLQEELARAI---ECDVDSE 602
           +TK    +  E+M+ + +F+ + I+++ +  + KE  FE L Q+E A+ +   + +++  
Sbjct: 489 RTKMQHEQNREEMDAHDRFFMDSIKQIHERRDAKEENFEMLQQQERAKVVGQQQQNINPS 548

Query: 603 TTENCKLREEQIQRIIDCQVKDAEEFDAEQDELIKTHEEKKANVKMEYMAKDVELEEELY 662
           + ++C+ R E++   I+ Q K+ EEF  E++ LIK  E+K  ++K  +  +  +LE+E  
Sbjct: 549 SNDDCRKRAEEVSSFIEFQEKEMEEFVEEREMLIKDQEKKMEDMKKRHHEEIFDLEKEFD 608

Query: 663 AALTSLMEKH 672
            AL  LM KH
Sbjct: 609 EALEQLMYKH 618



>AT3G22430.1 | chr3:7953455-7957605 FORWARD LENGTH=511
          Length = 510

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 20/131 (15%)

Query: 359 IVWPPVVIIMNTRLEQDKDGKWKGMGNKELLSYFSKYHVK--EACHAYGPDGHSGMSALI 416
           I+WPP VI+ NT   + K+G+ +G GNK + +   +  +   ++   YG +GH G++   
Sbjct: 358 IIWPPHVIVQNTSTGKGKEGRMEGFGNKTMDNRIRELGLTGGKSKSLYGREGHLGITLFK 417

Query: 417 FEGSAVAYKEAERLHNHFVDQRTDKYAWLNHRIVIPG------------------GKRQL 458
           F G     ++A R+  +F      + +W   + + P                    KR  
Sbjct: 418 FAGDDSGLRDAMRMAEYFEKINRGRKSWGRVQPLTPSKDDEKNPGLVEVDGRTGEKKRIF 477

Query: 459 YGFLAEKEDLE 469
           YG+LA   DL+
Sbjct: 478 YGYLATVTDLD 488



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.312    0.128    0.380 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,007,885
Number of extensions: 614701
Number of successful extensions: 2500
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 2530
Number of HSP's successfully gapped: 5
Length of query: 682
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 577
Effective length of database: 8,227,889
Effective search space: 4747491953
Effective search space used: 4747491953
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 115 (48.9 bits)