BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0176500 Os12g0176500|AB045677
(339 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G21690.3 | chr1:7615675-7618421 FORWARD LENGTH=342 517 e-147
AT1G77470.1 | chr1:29112194-29114323 REVERSE LENGTH=370 214 8e-56
AT1G63160.1 | chr1:23422068-23423771 REVERSE LENGTH=334 209 1e-54
AT5G27740.1 | chr5:9823831-9826869 FORWARD LENGTH=355 121 7e-28
AT1G14460.1 | chr1:4948962-4952750 REVERSE LENGTH=1117 80 1e-15
AT2G02480.1 | chr2:661093-665337 FORWARD LENGTH=1219 77 2e-14
AT4G24790.1 | chr4:12778222-12781345 FORWARD LENGTH=858 76 3e-14
AT5G45720.1 | chr5:18543338-18546629 REVERSE LENGTH=967 74 2e-13
AT5G22010.1 | chr5:7280632-7287037 REVERSE LENGTH=957 69 3e-12
AT1G24290.1 | chr1:8612650-8614227 REVERSE LENGTH=526 65 5e-11
AT4G18820.1 | chr4:10330371-10334090 FORWARD LENGTH=1098 64 1e-10
AT1G04730.1 | chr1:1325385-1331086 REVERSE LENGTH=944 54 1e-07
>AT1G21690.3 | chr1:7615675-7618421 FORWARD LENGTH=342
Length = 341
Score = 517 bits (1332), Expect = e-147, Method: Compositional matrix adjust.
Identities = 252/326 (77%), Positives = 279/326 (85%), Gaps = 6/326 (1%)
Query: 1 MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL 60
MAP++ SSQPWVEKYRP+QVKDVAHQEEVVRVLT TLQTAD PHMLFYGPPGTGKTTTAL
Sbjct: 1 MAPVLQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTAL 60
Query: 61 AIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS-ARKGGYPCPPYKIII 119
AIA+QL+GPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS R+ GYPCP +KIII
Sbjct: 61 AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIII 120
Query: 120 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 179
LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
Sbjct: 121 LDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS 180
Query: 180 NRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGXXXXXXXXXXXXGAI 239
NRILHICNEEGLSLD +AL+TLS+IS GDLRRAITYLQSA RLFG G +
Sbjct: 181 NRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVV 240
Query: 240 PEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNAD-DIPDEQKARI 298
P +VV L +CKSG+FD+ANKEV+NI+A+GYP SQ+I+Q D++ AD DI D QKA+I
Sbjct: 241 PLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKI 300
Query: 299 CKKLGEADK---C-LVDGADEYLQLL 320
CK L E DK C L +G+ +Q+L
Sbjct: 301 CKCLAETDKYNLCPLRNGSRLLMQIL 326
>AT1G77470.1 | chr1:29112194-29114323 REVERSE LENGTH=370
Length = 369
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 144/216 (66%), Gaps = 6/216 (2%)
Query: 3 PLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAI 62
P + PWVEKYRP+ + DVA +++ + LPH+L YGPPGTGKT+T LA+
Sbjct: 33 PPQSKATPWVEKYRPQSLDDVAAHRDIIDTIDRLTNENKLPHLLLYGPPGTGKTSTILAV 92
Query: 63 AYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDE 122
A +LYGP+ Y++ +LELNASDDRGI+VVR +I+DFA+ S K K+++LDE
Sbjct: 93 ARKLYGPK-YRNMILELNASDDRGIDVVRQQIQDFASTQSFSLGKSSV-----KLVLLDE 146
Query: 123 ADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRI 182
AD+MT+DAQ ALRR +E Y+K TRF I N++++II L SRC +FRF PL MS R+
Sbjct: 147 ADAMTKDAQFALRRVIEKYTKSTRFALIGNHVNKIIPALQSRCTRFRFAPLDGVHMSQRL 206
Query: 183 LHICNEEGLSLDAQALATLSTISNGDLRRAITYLQS 218
H+ E L + LA L +SNGD+R+A+ LQS
Sbjct: 207 KHVIEAERLVVSDCGLAALVRLSNGDMRKALNILQS 242
>AT1G63160.1 | chr1:23422068-23423771 REVERSE LENGTH=334
Length = 333
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 182/328 (55%), Gaps = 15/328 (4%)
Query: 8 SQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQLY 67
++PWVEKYRP +V D+ E+ V L + ++P+++ GPPGTGKTT+ LA+A++L
Sbjct: 14 NEPWVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELL 73
Query: 68 GPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDEADSMT 127
G YK VLELNASDDRGI+VVR KIK FA +K P +K++ILDEADSMT
Sbjct: 74 GTN-YKEAVLELNASDDRGIDVVRNKIKMFAQ------KKVTLPPGRHKVVILDEADSMT 126
Query: 128 EDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICN 187
AQ ALRRT+E YS TRF CN ++IIEP+ SRCA RF LS++ + R+L +
Sbjct: 127 SGAQQALRRTIEIYSNSTRFALACNTSAKIIEPIQSRCALVRFSRLSDQQILGRLLVVVA 186
Query: 188 EEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGXXXXXXXXXXXXGAIPEDVVKSL 247
E + + L + ++GD+R+A+ LQ+ F P VK++
Sbjct: 187 AEKVPYVPEGLEAIIFTADGDMRQALNNLQATFSGFSFVNQENVFKVCDQPHPLH-VKNI 245
Query: 248 LASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARICKKLGEADK 307
+ + +FD+A + + GY + +I+ +I N D+ + K K+ G A
Sbjct: 246 VRNVLESKFDIACDGLKQLYDLGYSPTDIITTLFRIIKNY-DMAEYLKLEFMKETGFAHM 304
Query: 308 CLVDGADEYLQL------LDVASETIRA 329
+ DG YLQL L + ET +A
Sbjct: 305 RICDGVGSYLQLCGLLAKLSIVRETAKA 332
>AT5G27740.1 | chr5:9823831-9826869 FORWARD LENGTH=355
Length = 354
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 38/239 (15%)
Query: 11 WVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGPE 70
WV+KYRP+ + V E++ + L + D PH+LFYGP G+GK T +A+ Q+YG
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPHLLFYGPSGSGKKTLIMALLKQIYGAS 62
Query: 71 LYKSRV--------------------------LELNASD----DRGINVVRTKIKDFAA- 99
K +V +EL SD DR I V+ IK+ A
Sbjct: 63 AEKVKVENRAWKVDAGSRTIDLELTTLSSTNHVELTPSDAGFQDRYI--VQEIIKEMAKN 120
Query: 100 VAVGSARKGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIE 159
+ + K GY K+++L+E D ++ +AQ++LRRTME YS R CN S++ E
Sbjct: 121 RPIDTKGKKGY-----KVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTE 175
Query: 160 PLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQS 218
+ SRC R S+E + + + +E L L A ++ SN LRRAI L++
Sbjct: 176 AIKSRCLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLET 234
>AT1G14460.1 | chr1:4948962-4952750 REVERSE LENGTH=1117
Length = 1116
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 161/355 (45%), Gaps = 42/355 (11%)
Query: 7 SSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHM-LFYGPPGTGKTTTALAIAYQ 65
S Q +KY+P ++ Q VV+ L ++ + H+ LF GP GTGKT+TA ++
Sbjct: 420 SIQSLSQKYKPMFFDELIGQSIVVQSLMNAVKKGRVAHVYLFQGPRGTGKTSTARILSAA 479
Query: 66 L-------------YGPE-----LYKSR-VLELNASDDRGINVVRTKIKDFAAVAVGSAR 106
L Y E L KSR +LEL+A G VR +K +A S++
Sbjct: 480 LNCDVVTEEMKPCGYCKECSDYMLGKSRDLLELDAGKKNGAEKVRYLLKKLLTLAPQSSQ 539
Query: 107 KGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFIC--NYISRIIEPLASR 164
+ YK+ ++DE + +L + +E + + +F F+C + + + SR
Sbjct: 540 R-------YKVFVIDECHLLPSRTWLSLLKFLE--NPLQKFVFVCITTDLDNVPRTIQSR 590
Query: 165 CAKFRFKPLSEEVMSNRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFG 224
C K+ F + + + R+ I ++E L +++QAL ++ ++G LR A T L+ + L G
Sbjct: 591 CQKYIFNKVRDGDIVVRLRKIASDENLDVESQALDLIALNADGSLRDAETMLEQLS-LMG 649
Query: 225 XXXXXXXXXXXXGAIPEDVVKSLLASCKSGEFDVANKEVNNIIADGY-PV---SQLISQF 280
G + +D + LL S + K+ ++ G P+ SQL S
Sbjct: 650 KRITVDLVNELVGVVSDDKLLELLELALSSDTAETVKKARELLDLGADPILMMSQLASLI 709
Query: 281 LDVIVNADDIPDEQKARIC---KKLGEADKCLVDGADEYLQLLDVASETIRALFD 332
+D+I A DE+ + + L EAD ++ L+LL A + +R D
Sbjct: 710 MDIIAGAYKALDEKYSEAFLDRRNLTEAD---LERLKHALKLLSEAEKQLRVSTD 761
>AT2G02480.1 | chr2:661093-665337 FORWARD LENGTH=1219
Length = 1218
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 152/346 (43%), Gaps = 37/346 (10%)
Query: 13 EKYRPRQVKDVAHQEEVVRVLTTTLQTADL-PHMLFYGPPGTGKTTTAL-------AIAY 64
+KYRP +++ Q VV+ L ++ + + P LF GP GTGKT+TA +A
Sbjct: 453 QKYRPMFFEELIGQSIVVQSLMNAVKRSRIAPVYLFQGPRGTGKTSTARIFSAALNCVAT 512
Query: 65 QLYGPELY----------KSR-VLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCP 113
+ P Y KS+ EL+ ++ +G + VR +K+ + ++
Sbjct: 513 EEMKPCGYCKECNDFMSGKSKDFWELDGANKKGADKVRYLLKNLPTILPRNS-------S 565
Query: 114 PYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPL 173
YK+ ++DE + + + +E + F FI + + + SRC KF F L
Sbjct: 566 MYKVFVIDECHLLPSKTWLSFLKFLENPLQKVVFIFITTDLENVPRTIQSRCQKFLFDKL 625
Query: 174 SEEVMSNRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGXXXXXXXXX 233
+ + R+ I ++E L +D AL ++ ++G LR A T L+ + L G
Sbjct: 626 KDSDIVVRLKKIASDENLDVDLHALDLIAMNADGSLRDAETMLEQLS-LLGKRITTALVN 684
Query: 234 XXXGAIPEDVVKSLLASCKSGEFDVANKEVNNIIADGY-PV---SQLISQFLDVIVNADD 289
G + ++ + LL S + K ++ G P+ SQL S +D+I
Sbjct: 685 ELVGVVSDEKLLELLELALSSDTAETVKRARELLDLGADPIVLMSQLASLIMDIIAGTYK 744
Query: 290 IPDEQKARI---CKKLGEADKCLVDGADEYLQLLDVASETIRALFD 332
+ DE+ + + L EAD ++G L+LL A + +R D
Sbjct: 745 VVDEKYSNAFFDGRNLTEAD---MEGLKHALKLLSEAEKQLRVSND 787
>AT4G24790.1 | chr4:12778222-12781345 FORWARD LENGTH=858
Length = 857
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 11/216 (5%)
Query: 8 SQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHM-LFYGPPGTGKTTTALAIAYQL 66
S+ +K+RP+ ++ QE VV+ L +T+ + + LF+GP GTGKT+T+ A L
Sbjct: 238 SRSLSQKFRPKSFDELVGQEVVVKCLLSTILRGRITSVYLFHGPRGTGKTSTSKIFAAAL 297
Query: 67 YG-PELYKSRVLELNAS-----DDRGINVVRTKIKDFAAVAVGSARKGGYPCPP----YK 116
+ SR L + RG +V+ T + + PP +K
Sbjct: 298 NCLSQAAHSRPCGLCSECKSYFSGRGRDVMETDSGKLNRPSYLRSLIKSASLPPVSSRFK 357
Query: 117 IIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEE 176
+ I+DE + ++ L +++ +S+ + F + + + ++ + SR K+ F + +
Sbjct: 358 VFIIDECQLLCQETWGTLLNSLDNFSQHSVFILVTSELEKLPRNVLSRSQKYHFSKVCDA 417
Query: 177 VMSNRILHICNEEGLSLDAQALATLSTISNGDLRRA 212
+S ++ IC EEG+ D A+ +++ S+G LR A
Sbjct: 418 DISTKLAKICIEEGIDFDQGAVDFIASKSDGSLRDA 453
>AT5G45720.1 | chr5:18543338-18546629 REVERSE LENGTH=967
Length = 966
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 8/285 (2%)
Query: 9 QPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHM-LFYGPPGTGKTTTALAIAYQLY 67
Q + +KY PR +D+ Q VV+ L+ + + + +F+GP GTGKT+ A A L
Sbjct: 343 QSFTQKYAPRTFRDLLGQNLVVQALSNAIAKRRVGLLYVFHGPNGTGKTSCARVFARALN 402
Query: 68 GPELYKSRVLELNAS----DDRGINVVRTK--IKDFAAVAVGSARKGGYPCPPYKIIILD 121
+S+ + +S DD +R +K F + ++I D
Sbjct: 403 CHSTEQSKPCGVCSSCVSYDDGKNRYIREMGPVKSFDFENLLDKTNIRQQQKQQLVLIFD 462
Query: 122 EADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNR 181
+ D+M+ D N L + ++ + F +C+ + + + SRC KF F L + + +
Sbjct: 463 DCDTMSTDCWNTLSKIVDRAPRRVVFVLVCSSLDVLPHIIVSRCQKFFFPKLKDVDIIDS 522
Query: 182 ILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGXXXXXXXXXXXXGAIPE 241
+ I ++E + +D AL +++ S+G LR A L+ + L G G I +
Sbjct: 523 LQLIASKEEIDIDKDALKLVASRSDGSLRDAEMTLEQLS-LLGTRISVPLVQEMVGLISD 581
Query: 242 DVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVN 286
+ + LL S + K + I+ G L+SQ VI +
Sbjct: 582 EKLVDLLDLALSADTVNTVKNLRIIMETGLEPLALMSQLATVITD 626
>AT5G22010.1 | chr5:7280632-7287037 REVERSE LENGTH=957
Length = 956
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 107/250 (42%), Gaps = 47/250 (18%)
Query: 4 LVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQ--------------------TADLP 43
++ +S PW EKYRP+ ++ + +V L L
Sbjct: 335 IIETSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKK 394
Query: 44 HMLFYGPPGTGKTTTALAIAYQLYGPELYKSRVLELNASDDRG--------------INV 89
+L G PG GKTT+A ++ Q+ G + +E+NASD RG N
Sbjct: 395 AVLLSGTPGIGKTTSAKLVS-QMLG-----FQAVEVNASDSRGKANSNIAKGIGGSNANS 448
Query: 90 VRTKIKDFAAVAVGSARKGGYPCPPYKIIILDEADSMTEDAQNALRRTM--ETYSKVTRF 147
V+ + + A A K P ++I+DE D M+ + + + SK+
Sbjct: 449 VKELVNNEAMAANFDRSKH-----PKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPII 503
Query: 148 FFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDAQALATLSTISNG 207
+ S+ ++ L + C ++ +++ M+ R++HI EGL ++ AL L+ NG
Sbjct: 504 CICNDRYSQKLKSLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNG 563
Query: 208 DLRRAITYLQ 217
D+R A+ LQ
Sbjct: 564 DIRLAVNQLQ 573
>AT1G24290.1 | chr1:8612650-8614227 REVERSE LENGTH=526
Length = 525
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 113/269 (42%), Gaps = 27/269 (10%)
Query: 9 QPWVEKYRPRQVKDVA---HQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQ 65
QP E+ RPR + DV H +L + +++ LP ++F+GPPGTGKT+ A ++
Sbjct: 101 QPLSERMRPRTLDDVVGQDHLLSPSSLLRSAVESNRLPSIVFWGPPGTGKTSIAKSLINS 160
Query: 66 LYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSARKGGYPCPPYKIIILDEADS 125
P LY R + L+A V + +KD AV SA++ ++ +DE
Sbjct: 161 SKDPSLY--RFVSLSA--------VTSGVKDVRD-AVESAKRLNLEGRKRTVLFMDEVHR 209
Query: 126 MTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHI 185
+ Q+ +E S + N +I PL SRC PL + +
Sbjct: 210 FNKSQQDTFLPVIEDGSILFIGATTENPSFHLITPLLSRCRVLTLNPLKPNHVETLLRRA 269
Query: 186 CN--EEGL----SLDAQALATLSTISNGDLRRAITYLQSAARLFGXXXXXXXXXXXXGAI 239
+ E GL +D + L+ +GD R A+ L+ +A + +
Sbjct: 270 VDDSERGLPNSVEVDDSVIEFLANNCDGDARVALNALEISATM------ATTRAGTDAVV 323
Query: 240 PEDVVKSLLASCKSGEFDVANKEVNNIIA 268
D K L CK +D A ++ N+I+
Sbjct: 324 SIDDAKEAL-QCKHLAYDKAGEQHYNLIS 351
>AT4G18820.1 | chr4:10330371-10334090 FORWARD LENGTH=1098
Length = 1097
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 31/311 (9%)
Query: 9 QPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHM-LFYGPPGTGKTTTALAIAYQLY 67
Q EKY P+ +D+ Q VV+ L+ + L + +F+GP GTGKT+ A A L
Sbjct: 431 QSLTEKYTPKTFRDLLGQNLVVQALSNAVARRKLGLLYVFHGPNGTGKTSCARIFARALN 490
Query: 68 GPELYKSR---VLELNASDDRGI-----------NVVRTKIKDF--AAVAVGSARKGGYP 111
+ + + S D G N KI D V V S
Sbjct: 491 CHSMEQPKPCGTCSSCVSHDMGKSWNIREVGPVGNYDFEKIMDLLDGNVMVSSQ------ 544
Query: 112 CPPYKIIILDEADSMTEDAQNALRRTMETYS-KVTRFFFICNYISRIIEPLASRCAKFRF 170
++ I D+ D+++ D NAL + ++ + + F +C+ + + + SRC KF F
Sbjct: 545 --SPRVFIFDDCDTLSSDCWNALSKVVDRAAPRHVVFILVCSSLDVLPHVIISRCQKFFF 602
Query: 171 KPLSEEVMSNRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGXXXXXX 230
L + + + I ++E + +D AL +++ S+G LR A L+ + L G
Sbjct: 603 PKLKDADIVYSLQWIASKEEIEIDKDALKLIASRSDGSLRDAEMTLEQLS-LLGQRISVP 661
Query: 231 XXXXXXGAIPEDVVKSLLASCKSGEFDVANKEVNNIIADGYP----VSQLISQFLDVIVN 286
G + ++ + LL S + K + I+ +SQL + D++
Sbjct: 662 LVQELVGLVSDEKLVDLLDLALSADTVNTVKNLRTIMETSVEPLALMSQLATVITDILAG 721
Query: 287 ADDIPDEQKAR 297
+ D +Q R
Sbjct: 722 SYDFTKDQHKR 732
>AT1G04730.1 | chr1:1325385-1331086 REVERSE LENGTH=944
Length = 943
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 40/201 (19%)
Query: 45 MLFYGPPGTGKTTTALAIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGS 104
+L G PG GKTT A IA + G RV+E+NASD+R + + T+I D V + S
Sbjct: 340 LLLCGAPGLGKTTLA-HIAAKHCG-----YRVVEINASDERSASAIETRILD--VVQMNS 391
Query: 105 ARKGGYPCPPYKIIILDEADSMTEDAQNALR-------------------RTMETYSKVT 145
P K +++DE D D + A+ ++T SK
Sbjct: 392 VTADSRP----KCLVIDEIDGALGDGKGAVDVILKMVLAERKHATGKENVENVKTSSKKD 447
Query: 146 R--------FFFICNYI-SRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDAQ 196
R ICN + + + PL F + + NR+ +ICN EG+ +
Sbjct: 448 RRTAPLSRPVICICNDLYAPALRPLRQIAKVHIFVQPTVSRVVNRLKYICNMEGMKARSF 507
Query: 197 ALATLSTISNGDLRRAITYLQ 217
AL+ L+ + D+R + LQ
Sbjct: 508 ALSALAEYTECDIRSCLNTLQ 528
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,777,886
Number of extensions: 262832
Number of successful extensions: 1010
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 993
Number of HSP's successfully gapped: 12
Length of query: 339
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 240
Effective length of database: 8,392,385
Effective search space: 2014172400
Effective search space used: 2014172400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)