BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0174700 Os12g0174700|Os12g0174700
(184 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192 167 3e-42
AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190 162 8e-41
AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188 159 7e-40
AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186 159 1e-39
AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187 155 1e-38
AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186 154 3e-38
AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188 147 3e-36
AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194 146 7e-36
AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183 145 9e-36
AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126 137 3e-33
AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174 134 3e-32
AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187 131 2e-31
AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191 130 4e-31
AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272 124 3e-29
AT3G24020.1 | chr3:8678827-8679558 FORWARD LENGTH=244 71 3e-13
AT4G13580.1 | chr4:7900427-7901161 FORWARD LENGTH=245 70 8e-13
AT1G64160.1 | chr1:23814063-23814611 FORWARD LENGTH=183 66 8e-12
AT4G11210.1 | chr4:6832691-6833245 FORWARD LENGTH=185 62 2e-10
AT4G23690.1 | chr4:12339152-12339715 REVERSE LENGTH=188 56 1e-08
AT2G28670.1 | chr2:12300380-12301723 REVERSE LENGTH=448 56 1e-08
AT1G07730.2 | chr1:2397527-2398696 REVERSE LENGTH=390 56 1e-08
AT4G11190.1 | chr4:6826682-6827236 FORWARD LENGTH=185 55 2e-08
AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323 54 3e-08
AT3G55230.1 | chr3:20471824-20472744 FORWARD LENGTH=307 54 3e-08
AT4G11180.1 | chr4:6820049-6820606 FORWARD LENGTH=186 52 2e-07
>AT5G49040.1 | chr5:19882676-19883251 REVERSE LENGTH=192
Length = 191
Score = 167 bits (422), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 106/143 (74%), Gaps = 1/143 (0%)
Query: 42 KVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTY 101
+VYWHD+V+G +P+++++ SS+S+FG++ +ID+ LT +N S+ VG+AQG Y
Sbjct: 49 RVYWHDIVTGRNPSSIRIQGPVAKYSSSSYFGSITMIDNALTLDVPIN-STVVGQAQGMY 107
Query: 102 VSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQ 161
V A + + LLM MN F++G+YNGST+ I+GRN V + VREM VVGG+G+FR+ARGY +
Sbjct: 108 VGAAQKEIGLLMAMNLAFKTGKYNGSTITILGRNTVMSKVREMPVVGGSGMFRFARGYVE 167
Query: 162 ARTHTLDMKTGDATVEYNLYINH 184
ART DMKTGDATVE N YI H
Sbjct: 168 ARTKLFDMKTGDATVESNCYILH 190
>AT1G65870.1 | chr1:24503624-24504193 FORWARD LENGTH=190
Length = 189
Score = 162 bits (411), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 102/141 (72%), Gaps = 1/141 (0%)
Query: 44 YWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTYVS 103
Y+HD+VSG PT+VQVA TTNSSA+ FG V V+DD LT GP++ S VGRAQG Y S
Sbjct: 50 YFHDIVSGDKPTSVQVANGPTTNSSATGFGLVAVVDDKLTVGPEI-TSEEVGRAQGMYAS 108
Query: 104 AGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQAR 163
A ++ + LLM N VF G+++ STVA+ GRN V + VREM ++GGTG FR+ RGYA A+
Sbjct: 109 ADQNKLGLLMAFNLVFTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAK 168
Query: 164 THTLDMKTGDATVEYNLYINH 184
T ++ +GDA VEYN+YI H
Sbjct: 169 TLVFNITSGDAVVEYNVYIWH 189
>AT1G55210.1 | chr1:20598057-20598620 REVERSE LENGTH=188
Length = 187
Score = 159 bits (402), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 107/143 (74%), Gaps = 4/143 (2%)
Query: 42 KVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTY 101
KVYWHD++SGP+PT++ + + TNSS +FGA+ +ID+ LT+ +N S+ +G+AQG Y
Sbjct: 48 KVYWHDILSGPNPTSIMI-QPPVTNSS--YFGAISMIDNALTAKVPMN-STVLGQAQGFY 103
Query: 102 VSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQ 161
A + + LM MNF F++G+YNGST+ I+GRN + VREM +VGG+G+FR+ARGY +
Sbjct: 104 AGAAQKELGFLMAMNFAFKTGKYNGSTITILGRNTALSEVREMPIVGGSGLFRFARGYVE 163
Query: 162 ARTHTLDMKTGDATVEYNLYINH 184
ART +++K GDATVEY+ Y+ H
Sbjct: 164 ARTKWINLKNGDATVEYSCYVLH 186
>AT1G58170.1 | chr1:21536188-21536745 FORWARD LENGTH=186
Length = 185
Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 98/143 (68%), Gaps = 1/143 (0%)
Query: 42 KVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTY 101
+VYWHD+V+G ++V + + A+ FG + +ID+PLT P L +S VGRAQG Y
Sbjct: 43 RVYWHDIVTGQDSSSVSIMNPPKKYTGATGFGLMRMIDNPLTLTPKL-SSKMVGRAQGFY 101
Query: 102 VSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQ 161
K+ + LLM MNF G+YNGST+ ++GRN VF VREM V+GG+G+FR+ARGY Q
Sbjct: 102 AGTSKEEIGLLMAMNFAILDGKYNGSTITVLGRNSVFDKVREMPVIGGSGLFRFARGYVQ 161
Query: 162 ARTHTLDMKTGDATVEYNLYINH 184
A TH ++KTG+A VEYN Y+ H
Sbjct: 162 ASTHEFNLKTGNAIVEYNCYLLH 184
>AT3G13650.1 | chr3:4463056-4463616 FORWARD LENGTH=187
Length = 186
Score = 155 bits (392), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 106/143 (74%), Gaps = 4/143 (2%)
Query: 42 KVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTY 101
+VYWHD++SG +P++V V +NSS FFG+V VID+ LT+ +N S+ VG+AQG Y
Sbjct: 47 RVYWHDILSGSNPSSV-VINPPISNSS--FFGSVTVIDNRLTTEVAVN-STLVGQAQGIY 102
Query: 102 VSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQ 161
+ G+ + LM MNF F++G+YNGS++AI+GRN V VREM V+GG+G+FR+ARGY +
Sbjct: 103 AATGQRDASALMVMNFAFKTGKYNGSSIAILGRNAVLTKVREMPVIGGSGLFRFARGYVE 162
Query: 162 ARTHTLDMKTGDATVEYNLYINH 184
ART D K+GDATVEY+ Y+ H
Sbjct: 163 ARTMWFDQKSGDATVEYSCYVLH 185
>AT5G42500.1 | chr5:16994359-16994916 REVERSE LENGTH=186
Length = 185
Score = 154 bits (389), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 5/142 (3%)
Query: 44 YWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTYVS 103
Y+HDV+SG PTAV+VA A TNSS FG +++ DDPLT GPD +S VGRAQG Y
Sbjct: 48 YFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPD-PSSKEVGRAQGMYAL 106
Query: 104 AGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQAR 163
++ M N F +G +NGSTVA+ GRNE+F+ VREM ++GGTG FR+ARGYAQA+
Sbjct: 107 TAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFARGYAQAK 166
Query: 164 THTLDMKTG-DATVEYNLYINH 184
T+ + G DA VEYN++I H
Sbjct: 167 TYKV---VGLDAVVEYNVFIWH 185
>AT2G21100.1 | chr2:9048687-9049336 REVERSE LENGTH=188
Length = 187
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 1/143 (0%)
Query: 42 KVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTY 101
+ Y+HD +SG +PTAV+VA+ T S + FGAV ++DD LT D S VGRAQG Y
Sbjct: 46 QFYFHDTLSGKNPTAVKVAQGTDTEKSPTLFGAVFMVDDALTETAD-PKSKLVGRAQGLY 104
Query: 102 VSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQ 161
S+ K+ V L+M M+F F+ G Y ST++++G+N +REM +VGGTG+FR ARGYA
Sbjct: 105 GSSCKEEVGLIMAMSFCFEDGPYKDSTISMIGKNSAMNPIREMPIVGGTGMFRMARGYAI 164
Query: 162 ARTHTLDMKTGDATVEYNLYINH 184
ART+ D KTGDA V YN+ I H
Sbjct: 165 ARTNWFDPKTGDAIVGYNVTIMH 187
>AT1G22900.1 | chr1:8103910-8104491 REVERSE LENGTH=194
Length = 193
Score = 146 bits (368), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 95/141 (67%), Gaps = 3/141 (2%)
Query: 44 YWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTYVS 103
Y+HD++SG PT ++VA A TNSSA+ FGAV+++D P+T GP+L +S VGRAQG Y S
Sbjct: 56 YFHDIISGDKPTTIRVAEAPGTNSSATVFGAVLIVDAPVTEGPEL-SSKEVGRAQGLYAS 114
Query: 104 AGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQAR 163
T M NFVF G +NGST A+ GRN + RE+ ++GGTG FR+ARGYA +
Sbjct: 115 TDMKTFGFTMVFNFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDFRFARGYALPK 174
Query: 164 THTLDMKTGDATVEYNLYINH 184
T+ + DA VEYN++I H
Sbjct: 175 TY--KVVNIDAVVEYNVFIWH 193
>AT5G42510.1 | chr5:16998268-16998816 REVERSE LENGTH=183
Length = 182
Score = 145 bits (367), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 97/142 (68%), Gaps = 5/142 (3%)
Query: 44 YWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTYVS 103
Y+HDV+SG PTAV+VA A T + FG +++ DDPLT GPD +S VGRAQG Y S
Sbjct: 45 YFHDVISGDKPTAVKVAEARPTTTLNVKFGVIMIADDPLTEGPD-PSSKEVGRAQGMYAS 103
Query: 104 AGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQAR 163
+ M N+VF +G +NGST+A+ GRN++F+ VRE+ ++GGTG FR+ARGYA +
Sbjct: 104 TAMKDIVFTMVFNYVFTAGEFNGSTIAVYGRNDIFSKVRELPIIGGTGAFRFARGYALPK 163
Query: 164 THTLDMKTG-DATVEYNLYINH 184
T+ + G DA VEYN++I H
Sbjct: 164 TYKI---VGLDAVVEYNVFIWH 182
>AT3G13660.1 | chr3:4465135-4465512 FORWARD LENGTH=126
Length = 125
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 90/124 (72%), Gaps = 2/124 (1%)
Query: 61 RAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQ 120
+ A +NSS SF G++ + D+ LTS +N S+ VG++QG Y A + + LM MNF F+
Sbjct: 3 QKAVSNSSTSF-GSITMTDNALTSDVPVN-STVVGQSQGFYAGAAQRELGFLMAMNFAFK 60
Query: 121 SGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQARTHTLDMKTGDATVEYNL 180
+G+YNGST+ I+GRN VF+ VREM VVGG+G+FR ARGY +ART D KTGDATVEYN
Sbjct: 61 TGKYNGSTITILGRNTVFSKVREMTVVGGSGIFRLARGYVEARTKWFDPKTGDATVEYNC 120
Query: 181 YINH 184
Y+ H
Sbjct: 121 YVLH 124
>AT3G13662.1 | chr3:4467090-4468470 FORWARD LENGTH=174
Length = 173
Score = 134 bits (336), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 94/131 (71%), Gaps = 4/131 (3%)
Query: 42 KVYWHDVVSGPSPTAVQVARAATTNSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQGTY 101
+VYWH+ V+G +P++V + + NSS S G++ ++DDPLT NA+ VG+AQG Y
Sbjct: 46 RVYWHNSVNGRNPSSVMIQQP-VLNSSLS--GSITMMDDPLTFDVPRNATV-VGQAQGMY 101
Query: 102 VSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYAQ 161
V+A + + LM MNF F +G+YNGST+ I+GRN V + VREM VVGG+G+FR+ARGY +
Sbjct: 102 VAAAQGEIGFLMVMNFAFTTGKYNGSTITILGRNVVMSKVREMPVVGGSGIFRFARGYVE 161
Query: 162 ARTHTLDMKTG 172
ART + D+K G
Sbjct: 162 ARTKSFDLKAG 172
>AT2G21110.1 | chr2:9050290-9050850 REVERSE LENGTH=187
Length = 186
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 96/145 (66%), Gaps = 5/145 (3%)
Query: 44 YWHDVVSGPSPTAVQVARAATT----NSSASFFGAVVVIDDPLTSGPDLNASSPVGRAQG 99
++HD ++ P+P+A+ +A+ T +SS S FG++ +DDPLT GPD S +G A+G
Sbjct: 42 FFHDTLTAPNPSAILIAKPTHTRGDNDSSPSPFGSLFALDDPLTVGPD-PKSEKIGNARG 100
Query: 100 TYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGY 159
YVS+GK L M ++F F SG++NGS++A+ RN + RE+AVVGG G FR ARG
Sbjct: 101 MYVSSGKHVPTLTMYVDFGFTSGKFNGSSIAVFSRNTITEKEREVAVVGGRGRFRMARGV 160
Query: 160 AQARTHTLDMKTGDATVEYNLYINH 184
AQ T+ +++ GDA VEYN+ + H
Sbjct: 161 AQLNTYYVNLTNGDAIVEYNVTLYH 185
>AT4G38700.1 | chr4:18076583-18077155 REVERSE LENGTH=191
Length = 190
Score = 130 bits (327), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 97/149 (65%), Gaps = 7/149 (4%)
Query: 42 KVYWHDVVSGPSPTAVQVARAATTNSSAS--FFGAVVVIDDPLTSGPDLNASSPVGRAQG 99
+ Y HD +SG +PTAV++A A T SAS FG++ VIDDPLT GP+ + S +G QG
Sbjct: 42 RFYLHDTLSGQNPTAVRIAHANLTGGSASPVGFGSLFVIDDPLTVGPEKH-SKEIGNGQG 100
Query: 100 TYVSAGKD--TVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAV--REMAVVGGTGVFRW 155
YVS KD ++M + F +G++NGS+++I RN V V RE+A+VGG G FR
Sbjct: 101 MYVSGCKDLSKFTIVMYADLAFTAGKFNGSSISIFSRNPVAEEVGEREIAIVGGRGKFRM 160
Query: 156 ARGYAQARTHTLDMKTGDATVEYNLYINH 184
ARG+ + +T+ +DMKTGDA + Y+ + H
Sbjct: 161 ARGFVKVKTNKIDMKTGDAVLRYDATVYH 189
>AT3G58090.1 | chr3:21512479-21513905 REVERSE LENGTH=272
Length = 271
Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 80/110 (72%), Gaps = 1/110 (0%)
Query: 75 VVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGR 134
+ ++DD LT GP++ S VGRAQG + SA ++ LLM NFVF G ++GSTV++ GR
Sbjct: 163 IPLVDDILTVGPEI-TSEEVGRAQGIFASADQNNFGLLMAFNFVFTKGEFSGSTVSMYGR 221
Query: 135 NEVFAAVREMAVVGGTGVFRWARGYAQARTHTLDMKTGDATVEYNLYINH 184
N +F+ VREM ++GGTG FR+ RGYAQA+T T + +G+A V+YN+YI H
Sbjct: 222 NPIFSKVREMPIIGGTGAFRFGRGYAQAKTFTFNTTSGNAVVKYNVYIWH 271
>AT3G24020.1 | chr3:8678827-8679558 FORWARD LENGTH=244
Length = 243
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAI 131
FG + VIDD LTSGPDL S P+G+AQG YV++ D +M + + G YN +
Sbjct: 129 FGTITVIDDILTSGPDL-GSQPLGKAQGVYVASSADGSTQMMAFTAMLEGGEYN-DNLNF 186
Query: 132 MGRNEVFAAVREMAVVGGTGVFRWARGYAQAR 163
G + +A+ ++V GGTG F+ A G+A+ R
Sbjct: 187 YGIYRIGSAMSHLSVTGGTGRFKNACGFAEVR 218
>AT4G13580.1 | chr4:7900427-7901161 FORWARD LENGTH=245
Length = 244
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAI 131
FG + VIDD +TSGPDL S P+G+AQG YV++ D +M + + G YN +
Sbjct: 130 FGTITVIDDIITSGPDL-GSQPLGKAQGVYVASSADGSTQMMAFTAMLEGGEYN-DNLNF 187
Query: 132 MGRNEVFAAVREMAVVGGTGVFRWARGYAQAR 163
G + +A+ ++V GGTG F+ A G+A+ R
Sbjct: 188 YGIYRIGSAMSHLSVTGGTGRFKNACGFAEVR 219
>AT1G64160.1 | chr1:23814063-23814611 FORWARD LENGTH=183
Length = 182
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 6/129 (4%)
Query: 43 VYWHDVVSGPSPTAVQVARAATTNSSA--SF-FGAVVVIDDPLTSGPDLNASSPVGRAQG 99
+Y+HD++ G AA TN +F FG +V+ DDP+T + S PV RAQG
Sbjct: 40 LYYHDIMFGVDDVQ-NATSAAVTNPPGLGNFKFGKLVIFDDPMTIDKNFQ-SEPVARAQG 97
Query: 100 TYVSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGY 159
Y K+ VF S ++ G T+ IMG + + R+++VVGGTG F +RG
Sbjct: 98 FYFYDMKNDYNAWFAYTLVFNSTQHKG-TLNIMGADLMMVQSRDLSVVGGTGDFFMSRGI 156
Query: 160 AQARTHTLD 168
T T +
Sbjct: 157 VTFETDTFE 165
>AT4G11210.1 | chr4:6832691-6833245 FORWARD LENGTH=185
Length = 184
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAI 131
FG V++DDP+T + S PV R QG + GK T + VF S ++ G+ I
Sbjct: 72 FGKFVIMDDPVTMDQNY-LSKPVARVQGFFCYHGKATYDAWIAWTVVFNSTQHKGA-FTI 129
Query: 132 MGRNEVFAAVREMAVVGGTGVFRWARGYAQARTHTLD 168
MG N R++ +VGGTG F RG A T +D
Sbjct: 130 MGENPFMEPTRDLPIVGGTGDFIMTRGIATLTTDHID 166
>AT4G23690.1 | chr4:12339152-12339715 REVERSE LENGTH=188
Length = 187
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 44 YWHDVV-SGPSPTAVQVARAATTNSSASF-FGAVVVIDDPLTSGPDLNASSPVGRAQGTY 101
Y+HD++ G + A + +F FG V+ D P+T + S PV RAQG Y
Sbjct: 46 YFHDILYDGDNVANATSAAIVSPPGLGNFKFGKFVIFDGPITMDKNY-LSKPVARAQGFY 104
Query: 102 VSAGKDTVALLMNMNFVFQSGRYNGSTVAIMGRNEVFAAVREMAVVGGTGVFRWARGYA 160
K + VF S + G T+ IMG + + R+++VVGGTG F ARG A
Sbjct: 105 FYDMKMDFNSWFSYTLVFNSTEHKG-TLNIMGADLMMEPTRDLSVVGGTGDFFMARGIA 162
>AT2G28670.1 | chr2:12300380-12301723 REVERSE LENGTH=448
Length = 447
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAI 131
FG + VIDD LT G +L S +G+AQG YV++ D + M +F+SG Y S ++
Sbjct: 326 FGTMTVIDDELTEGHEL-GSGLLGKAQGYYVASAIDGTSQTMAFTAMFESGGYEDS-ISF 383
Query: 132 MGRNEVFAAVREMAVVGGTGVFRWARGYAQARTHT 166
G + + V+GGTG + ARG+A +T T
Sbjct: 384 FGVLRTAVSESHIGVMGGTGKYVNARGFAILKTFT 418
>AT1G07730.2 | chr1:2397527-2398696 REVERSE LENGTH=390
Length = 389
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAI 131
FG + V+D+ LT G +L S +G+AQG YV++ D + M +F+SG Y S ++
Sbjct: 268 FGTLTVMDNELTEGHEL-GSGLLGKAQGFYVASALDGTSQTMAFTAMFESGGYEDS-ISF 325
Query: 132 MGRNEVFAAVREMAVVGGTGVFRWARGYAQARTHT 166
G + A+ + V+GGTG + ARG+A +T T
Sbjct: 326 FGVHRTAASESHLGVMGGTGKYVNARGFAIVKTFT 360
>AT4G11190.1 | chr4:6826682-6827236 FORWARD LENGTH=185
Length = 184
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAI 131
FG V++D+P+T ++ S V R QG + GK ++ + VF S ++ G+ + I
Sbjct: 72 FGKFVIMDNPVTMDQNM-LSEQVARVQGFFFYHGKTKYDTWLSWSVVFNSTQHKGA-LNI 129
Query: 132 MGRNEVFAAVREMAVVGGTGVFRWARGYAQARTHTLD 168
MG N R++ VVGGTG F RG A T ++
Sbjct: 130 MGENAFMEPTRDLPVVGGTGDFVMTRGIATFMTDLVE 166
>AT2G39430.1 | chr2:16463422-16464390 FORWARD LENGTH=323
Length = 322
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGST--- 128
FG + V+DD LT +L S+ +GRAQG Y+++ D + +++ + T
Sbjct: 200 FGTITVVDDELTESHEL-GSAVIGRAQGFYLASSLDGTSQTLSLTVLLHGEHDQHDTLDD 258
Query: 129 -VAIMGRNEVFAAVREMAVVGGTGVFRWARGYA-------QARTHTLDMKTGDATVEYNL 180
++ G + + ++AV+GGTG F A+GYA Q H D + D + +++
Sbjct: 259 AISFFGVHRTASHASQIAVIGGTGKFEHAKGYAIVETLHNQDNQHITDGQ--DTILHFSV 316
Query: 181 YI 182
Y+
Sbjct: 317 YL 318
>AT3G55230.1 | chr3:20471824-20472744 FORWARD LENGTH=307
Length = 306
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKD----TVALLMNMNFVFQSGRYNGS 127
FG++ V+DD LT G +L S+ +GRAQG Y+++ D T++L + ++
Sbjct: 183 FGSITVVDDELTEGHEL-GSAIIGRAQGFYLASSLDGTSQTLSLTVLLHEDHDHHDTLDD 241
Query: 128 TVAIMGRNEVFAAVREMAVVGGTGVFRWARGYA-------QARTHTLDMKTGDATVEYNL 180
++ G + + +AVVGGTG F A+GYA Q H D D + +++
Sbjct: 242 AISFFGVHRTASHASHIAVVGGTGRFEHAKGYAVVETLHNQEDQHVTDGH--DTILHFSV 299
Query: 181 YI 182
Y+
Sbjct: 300 YL 301
>AT4G11180.1 | chr4:6820049-6820606 FORWARD LENGTH=186
Length = 185
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 72 FGAVVVIDDPLTSGPDLNASSPVGRAQGTYVSAGKDTVALLMNMNFVFQSGRYNGSTVAI 131
FG +++I++P+T + S PV RAQG Y K + VF S ++ G T I
Sbjct: 73 FGELIIINNPVTLDQNY-LSKPVARAQGFYFYNMKTNYNAWVAWTLVFNSTKHKG-TFTI 130
Query: 132 MGRNEV-FAAVREMAVVGGTGVFRWARGYAQART 164
M N R++++VGGTG F RG A +T
Sbjct: 131 MDANPFGLQPARDLSIVGGTGDFLMTRGIATFKT 164
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.130 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,006,261
Number of extensions: 106878
Number of successful extensions: 301
Number of sequences better than 1.0e-05: 25
Number of HSP's gapped: 265
Number of HSP's successfully gapped: 25
Length of query: 184
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 92
Effective length of database: 8,584,297
Effective search space: 789755324
Effective search space used: 789755324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 108 (46.2 bits)