BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0163400 Os12g0163400|AK102298
(445 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456 544 e-155
AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446 535 e-152
AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430 510 e-145
AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408 451 e-127
AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395 403 e-112
AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414 389 e-108
AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381 371 e-103
AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390 362 e-100
AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380 322 4e-88
AT1G61940.1 | chr1:22897399-22898575 REVERSE LENGTH=245 89 4e-18
AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399 60 3e-09
>AT1G76900.1 | chr1:28882741-28884377 FORWARD LENGTH=456
Length = 455
Score = 544 bits (1401), Expect = e-155, Method: Compositional matrix adjust.
Identities = 285/461 (61%), Positives = 328/461 (71%), Gaps = 22/461 (4%)
Query: 1 MSFRSIVRDVRDGFGSLSRRGFEVRL--VGHRRGRSHSAVHELRDGHXXXXXXDVVQSSC 58
MSFRSIVRDVRD GSLSRR F+ +L + G+S +V D H +Q +
Sbjct: 1 MSFRSIVRDVRDSIGSLSRRSFDFKLSSLNKEGGKSRGSVQ---DSHEEQLVV-TIQETP 56
Query: 59 WANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPV 118
WANLPPELLRDVI+RLE SE+ WP+R++VVACA+VCR+WRDMC+EIV++PE GKITFPV
Sbjct: 57 WANLPPELLRDVIKRLEESESVWPARRHVVACASVCRSWRDMCKEIVQSPELSGKITFPV 116
Query: 119 SLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIF 178
SLKQPGPR+ +QCFIKRDKS TY+LYLCLS A+LVE+GKFLLSAKR R T TEY I
Sbjct: 117 SLKQPGPRDATMQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRIRRTTYTEYVIS 176
Query: 179 MSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNT--ANVSQSGKTSRRFYSRKVSPK 236
M AD SRSSN YIGK+RSN LGTKF+IYDTQP N+ A Q SRRFYS++VSPK
Sbjct: 177 MHADTISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNIARAVQPVGLSRRFYSKRVSPK 236
Query: 237 NPSSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARS-LDEX 295
PS +Y IAQVSYELNVLGTRGPRRM+C M+SIPASSL GGTVP QPD ++ RS LDE
Sbjct: 237 VPSGSYKIAQVSYELNVLGTRGPRRMHCAMNSIPASSLAEGGTVPGQPDIIVPRSILDES 296
Query: 296 XXXXXXXXXXXM--DRSIRFSSSRYSDISVGGPMVGGQ--ALGDSDESKERPLILRNKAP 351
+ D S FSS+R+SDI GP+ Q L + E PL+L+NK P
Sbjct: 297 FRSITSSSSRKITYDYSNDFSSARFSDIL--GPLSEDQEVVLEEGKERNSPPLVLKNKPP 354
Query: 352 RWHEQLQCWCLNFKGRVTVASVKNFQLVXXXXXXXXXXXXXXXXXXXXXDH-------DK 404
RWHEQLQCWCLNF+GRVTVASVKNFQL+ DK
Sbjct: 355 RWHEQLQCWCLNFRGRVTVASVKNFQLIAANQPQPQPQPQPQPQPLTQPQPSGQTDGPDK 414
Query: 405 VILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
+ILQFGKV KDMFTMD+RYPLSAFQAFAICLSSFDTKLACE
Sbjct: 415 IILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTKLACE 455
>AT1G25280.1 | chr1:8864961-8866608 FORWARD LENGTH=446
Length = 445
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 278/452 (61%), Positives = 333/452 (73%), Gaps = 14/452 (3%)
Query: 1 MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHXXXXXXDVVQSSCWA 60
MSFR IV+D+RDGFGSLSRR F+ RL +G++ + +VQ+S WA
Sbjct: 1 MSFRGIVQDLRDGFGSLSRRSFDFRLSSLHKGKAQGSSFREYSSSRDLLSPVIVQTSRWA 60
Query: 61 NLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSL 120
NLPPELL DVI+RLE SE+ WP+RK+VVACA+VCR+WR MC+EIV PE CGK+TFPVSL
Sbjct: 61 NLPPELLFDVIKRLEESESNWPARKHVVACASVCRSWRAMCQEIVLGPEICGKLTFPVSL 120
Query: 121 KQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMS 180
KQPGPR+ IQCFIKRDKS T++L+LCLS A+LVE+GKFLLSAKR R T TEY I M
Sbjct: 121 KQPGPRDAMIQCFIKRDKSKLTFHLFLCLSPALLVENGKFLLSAKRTRRTTRTEYIISMD 180
Query: 181 ADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQ-SGKTSR-RFYSRKVSPKNP 238
ADN SRSSN Y+GKLRSN LGTKF++YDTQPP NT++ + + +TSR RF+SR+VSPK P
Sbjct: 181 ADNISRSSNSYLGKLRSNFLGTKFLVYDTQPPPNTSSSALITDRTSRSRFHSRRVSPKVP 240
Query: 239 SSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLAR--SLDEXX 296
S +Y+IAQ++YELNVLGTRGPRRM+C+M+SIP SSLE GG+VP QP+ ++ SLD+
Sbjct: 241 SGSYNIAQITYELNVLGTRGPRRMHCIMNSIPISSLEPGGSVPNQPEKLVPAPYSLDDSF 300
Query: 297 XXXXXXXXXXMD-RSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHE 355
D RS+ FSSSR+S++ G + +E+ RPLIL+NK PRWHE
Sbjct: 301 RSNISFSKSSFDHRSLDFSSSRFSEM-------GISCDDNEEEASFRPLILKNKQPRWHE 353
Query: 356 QLQCWCLNFKGRVTVASVKNFQLVXXXXXXXXXX--XXXXXXXXXXXDHDKVILQFGKVA 413
QLQCWCLNF+GRVTVASVKNFQLV + DKVILQFGKV
Sbjct: 354 QLQCWCLNFRGRVTVASVKNFQLVAARQPQPQGTGAAAAPTSAPAHPEQDKVILQFGKVG 413
Query: 414 KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE
Sbjct: 414 KDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
>AT1G43640.1 | chr1:16439619-16441253 REVERSE LENGTH=430
Length = 429
Score = 510 bits (1313), Expect = e-145, Method: Compositional matrix adjust.
Identities = 265/457 (57%), Positives = 316/457 (69%), Gaps = 40/457 (8%)
Query: 1 MSFRSIVRDVRDGFGSLSRRGFEVRL---VGHRRGRSHSAVHELRDGHXXXXXXDVVQSS 57
MSF SIVRDVRD GS SRR F+VR+ H+R +SH + D V++++
Sbjct: 1 MSFLSIVRDVRDTVGSFSRRSFDVRVSNGTTHQRSKSHGVEAHIED-------LIVIKNT 53
Query: 58 CWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFP 117
WANLP LLRDV+++L+ SE+ WP+RK VVACA VC+TWR MC++IVK+PEF GK+TFP
Sbjct: 54 RWANLPAALLRDVMKKLDESESTWPARKQVVACAGVCKTWRLMCKDIVKSPEFSGKLTFP 113
Query: 118 VSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTI 177
VSLKQPGPR+G IQC+IKRDKS TY+LYL LS A+LVESGKFLLSAKR RAT TEY I
Sbjct: 114 VSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAILVESGKFLLSAKRSRRATYTEYVI 173
Query: 178 FMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKN 237
M ADN SRSS+ YIGKL+SN LGTKF++YDT P N++ + SR F S+KVSPK
Sbjct: 174 SMDADNISRSSSTYIGKLKSNFLGTKFIVYDTAPAYNSSQILSPPNRSRSFNSKKVSPKV 233
Query: 238 PSSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDEXXX 297
PS +Y+IAQV+YELN+LGTRGPRRMNC+MHSIP+ +LE GGTVP QP+ L RSLDE
Sbjct: 234 PSGSYNIAQVTYELNLLGTRGPRRMNCIMHSIPSLALEPGGTVPSQPE-FLQRSLDESF- 291
Query: 298 XXXXXXXXXMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQL 357
RSI SS+ + S G +E K RPL+L+ K PRW + L
Sbjct: 292 -----------RSI--GSSKIVNHS------GDFTRPKEEEGKVRPLVLKTKPPRWLQPL 332
Query: 358 QCWCLNFKGRVTVASVKNFQLVXXXXX---------XXXXXXXXXXXXXXXXDHDKVILQ 408
+CWCLNFKGRVTVASVKNFQL+ +HDK+IL
Sbjct: 333 RCWCLNFKGRVTVASVKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILH 392
Query: 409 FGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
FGKV KDMFTMDYRYPLSAFQAFAI LS+FDTKLACE
Sbjct: 393 FGKVGKDMFTMDYRYPLSAFQAFAISLSTFDTKLACE 429
>AT2G47900.3 | chr2:19611196-19612766 REVERSE LENGTH=408
Length = 407
Score = 451 bits (1160), Expect = e-127, Method: Compositional matrix adjust.
Identities = 232/446 (52%), Positives = 293/446 (65%), Gaps = 40/446 (8%)
Query: 1 MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHXXXXXXDVVQSSCWA 60
MSF+S+++D+R GS+SR+GF+VR G+ R RS V + D + SCWA
Sbjct: 1 MSFKSLIQDMRGELGSISRKGFDVRF-GYGRSRSQRVVQD------TSVPVDAFKQSCWA 53
Query: 61 NLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSL 120
++PPELLRDV+ R+E SE WPSRKNVV+CA VCR WR++ +EIV+ PE K+TFP+SL
Sbjct: 54 SMPPELLRDVLMRIEQSEDTWPSRKNVVSCAGVCRNWREIVKEIVRVPELSSKLTFPISL 113
Query: 121 KQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLV-ESGKFLLSAKRYSRATCTEYTIFM 179
KQPGPR +QC+I R++S QTY LYL L+ A + GKFLL+AKR+ R TCT+Y I +
Sbjct: 114 KQPGPRGSLVQCYIMRNRSNQTYYLYLGLNQAAASNDDGKFLLAAKRFRRPTCTDYIISL 173
Query: 180 SADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNPS 239
+ D+ SR SN YIGKLRSN LGTKF +YD QP V+++ ++SR ++VSP+ PS
Sbjct: 174 NCDDVSRGSNTYIGKLRSNFLGTKFTVYDAQPTNPGTQVTRT-RSSRLLSLKQVSPRIPS 232
Query: 240 STYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDEXXXXX 299
Y +A +SYELNVLG+RGPRRM CVM +IPAS++E GGT P Q + V + +LD
Sbjct: 233 GNYPVAHISYELNVLGSRGPRRMQCVMDAIPASAVEPGGTAPTQTELVHS-NLDSFPSFS 291
Query: 300 XXXXXXXMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQC 359
S+ GP Q KE L+L+NKAPRWHEQLQC
Sbjct: 292 FFRSKSIRAESL-----------PSGPSSAAQ--------KEGLLVLKNKAPRWHEQLQC 332
Query: 360 WCLNFKGRVTVASVKNFQLVXXXXXXXXXXXXXXXXXXXXXDHDKVILQFGKVAKDMFTM 419
WCLNF GRVTVASVKNFQLV +H+ VILQFGKV KD+FTM
Sbjct: 333 WCLNFNGRVTVASVKNFQLV-----------AAPENGPAGPEHENVILQFGKVGKDVFTM 381
Query: 420 DYRYPLSAFQAFAICLSSFDTKLACE 445
DY+YP+SAFQAF ICLSSFDTK+ACE
Sbjct: 382 DYQYPISAFQAFTICLSSFDTKIACE 407
>AT2G18280.1 | chr2:7946754-7948176 FORWARD LENGTH=395
Length = 394
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/449 (48%), Positives = 286/449 (63%), Gaps = 60/449 (13%)
Query: 1 MSFRSIVRD---VRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHXXXXXXDVVQSS 57
MS +SI+RD VRDG G +S+R + SH A + D + S
Sbjct: 1 MSLKSILRDLKEVRDGLGGISKRSWS--------KSSHIAPDQ------TTPPLDNIPQS 46
Query: 58 CWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFP 117
WA+LPPELL D+I R+E SE AWP+R VV+CA+VC++WR + EIV+ PE CGK+TFP
Sbjct: 47 PWASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFP 106
Query: 118 VSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTI 177
+SLKQPGPR+ IQCFIKR+++T TY LY L + E+ K LL+A+R RATCT++ I
Sbjct: 107 ISLKQPGPRDSPIQCFIKRNRATATYILYYGLMPSE-TENDKLLLAARRIRRATCTDFII 165
Query: 178 FMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKN 237
+SA N SRSS+ Y+GKLRS LGTKF IYD Q TA+ + + +RR + ++ +PK
Sbjct: 166 SLSAKNFSRSSSTYVGKLRSGFLGTKFTIYDNQ----TASSTAQAQPNRRLHPKQAAPKL 221
Query: 238 PSSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDEXXX 297
P+++ ++ ++YELNVL TRGPRRM+C M SIP SS+ A +V + ++E
Sbjct: 222 PTNSSTVGNITYELNVLRTRGPRRMHCAMDSIPLSSVIAEPSV--------VQGIEE--- 270
Query: 298 XXXXXXXXXMDRSIRFSSSRYSDISVGGPMVGGQALGDSDES-KERPLILRNKAPRWHEQ 356
SSS G + + + D+ S +++PL+L+NK+PRWHEQ
Sbjct: 271 --------------EVSSSPSPK---GETITTDKEIPDNSPSLRDQPLVLKNKSPRWHEQ 313
Query: 357 LQCWCLNFKGRVTVASVKNFQLVXXXXXXXXXXXXXXXXXXXXXDHDKVILQFGKVAKDM 416
LQCWCLNFKGRVTVASVKNFQLV +H++VILQFGK+ KD+
Sbjct: 314 LQCWCLNFKGRVTVASVKNFQLV---------AEIDASLDAPPEEHERVILQFGKIGKDI 364
Query: 417 FTMDYRYPLSAFQAFAICLSSFDTKLACE 445
FTMDYRYPLSAFQAFAIC+SSFDTK ACE
Sbjct: 365 FTMDYRYPLSAFQAFAICISSFDTKPACE 393
>AT1G47270.1 | chr1:17326828-17328564 FORWARD LENGTH=414
Length = 413
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/447 (47%), Positives = 274/447 (61%), Gaps = 61/447 (13%)
Query: 1 MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHXXXXXXDVVQSSCWA 60
MS ++IV++ G RRGRSH A E + + S W
Sbjct: 26 MSLKNIVKNKYKAIG--------------RRGRSHIA-PEGSSVSSSLSTNEGLNQSIWV 70
Query: 61 NLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSL 120
+LPPELL D+I+R+E+ ++ WP R++VVACA+VC++WR+M +E+VK PE G ITFP+SL
Sbjct: 71 DLPPELLLDIIQRIESEQSLWPGRRDVVACASVCKSWREMTKEVVKVPELSGLITFPISL 130
Query: 121 KQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMS 180
+QPGPR+ IQCFIKR+++T Y LYL LS A+ + K LLSAKR RAT E+ + +S
Sbjct: 131 RQPGPRDAPIQCFIKRERATGIYRLYLGLSPALSGDKSKLLLSAKRVRRATGAEFVVSLS 190
Query: 181 ADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSP--KNP 238
++ SRSS+ YIGKLRSN LGTKF +Y+ QPP + S +VSP +
Sbjct: 191 GNDFSRSSSNYIGKLRSNFLGTKFTVYENQPPPFNRKLPP---------SMQVSPWVSSS 241
Query: 239 SSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDEXXXX 298
SS+Y+IA + YELNVL TRGPRRM C+MHSIP S+++ GG + +S E
Sbjct: 242 SSSYNIASILYELNVLRTRGPRRMQCIMHSIPISAIQEGGKI---------QSPTEFTNQ 292
Query: 299 XXXXXXXXMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQ 358
MD F S +GG+++ + PLIL+NK+PRWHEQLQ
Sbjct: 293 GKKKKKPLMD----FCSGN----------LGGESV------IKEPLILKNKSPRWHEQLQ 332
Query: 359 CWCLNFKGRVTVASVKNFQLVXXXXXXXXXXXXXXXXXXXXXDHDKVILQFGKVAKDMFT 418
CWCLNFKGRVTVASVKNFQLV + D+VILQFGK+ KD+FT
Sbjct: 333 CWCLNFKGRVTVASVKNFQLV------AAAAEAGKNMNIPEEEQDRVILQFGKIGKDIFT 386
Query: 419 MDYRYPLSAFQAFAICLSSFDTKLACE 445
MDYRYP+SAFQAFAICLSSFDTK CE
Sbjct: 387 MDYRYPISAFQAFAICLSSFDTKPVCE 413
>AT3G06380.1 | chr3:1936384-1938028 FORWARD LENGTH=381
Length = 380
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/425 (47%), Positives = 263/425 (61%), Gaps = 55/425 (12%)
Query: 26 LVGHRRGRSHSAVHELRDGHXXXXXXDVVQSSCWANLPPELLRDVIERLEASEAA-WPSR 84
L+ R R H VH + W+ LP ELLR+++ R+E + WPSR
Sbjct: 6 LLQEMRSRPHRVVH------AAASTANSSDPFSWSELPEELLREILIRVETVDGGDWPSR 59
Query: 85 KNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYN 144
+NVVACA VCR+WR + +EIV PEF K+TFP+SLKQ GPR+ +QCFIKR+++TQ+Y+
Sbjct: 60 RNVVACAGVCRSWRILTKEIVAVPEFSSKLTFPISLKQSGPRDSLVQCFIKRNRNTQSYH 119
Query: 145 LYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKF 204
LYL L+++ L ++GKFLL+A + RATCT+Y I + +D+ S+ SN Y+G++RSN LGTKF
Sbjct: 120 LYLGLTTS-LTDNGKFLLAASKLKRATCTDYIISLRSDDISKRSNAYLGRMRSNFLGTKF 178
Query: 205 VIYDTQPPCNTANVSQSG----KTSRRFYSRKVSPKNPSSTYSIAQVSYELNVLGTRGPR 260
++D SQ+G + SR KVSP+ P +Y IA +SYELNVLG+RGPR
Sbjct: 179 TVFDG---------SQTGAAKMQKSRSSNFIKVSPRVPQGSYPIAHISYELNVLGSRGPR 229
Query: 261 RMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDEXXXXXXXXXXXXMDRSIRFSSSRYSD 320
RM C+M +IP S +E+ G V+A + + +R +S+ SD
Sbjct: 230 RMRCIMDTIPMSIVESRG--------VVASTSISSFSSRSSPVFRSHSKPLRSNSASCSD 281
Query: 321 ISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVX 380
G LGD PL+L NKAPRWHEQL+CWCLNF GRVTVASVKNFQLV
Sbjct: 282 --------SGNNLGDP------PLVLSNKAPRWHEQLRCWCLNFHGRVTVASVKNFQLVA 327
Query: 381 XXXXXXXXXXXXXXXXXXXXDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDT 440
+++ILQFGKV KDMFTMDY YP+SAFQAFAICLSSF+T
Sbjct: 328 VSDCEAGQTS------------ERIILQFGKVGKDMFTMDYGYPISAFQAFAICLSSFET 375
Query: 441 KLACE 445
++ACE
Sbjct: 376 RIACE 380
>AT5G18680.1 | chr5:6228358-6230426 REVERSE LENGTH=390
Length = 389
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/431 (45%), Positives = 257/431 (59%), Gaps = 58/431 (13%)
Query: 26 LVGHRRGRSHSAVHELRDGHXXXXXXDVVQSSCWANLPPELLRDVIERLEASEAA-WPSR 84
L+ R R H VH+L Q W+ +P ELLR+++ R+EA++ WPSR
Sbjct: 6 LILEMRSRPHRVVHDLAAAAAADSTSVSSQDYRWSEIPEELLREILIRVEAADGGGWPSR 65
Query: 85 KNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYN 144
++VVACA VCR WR + E V PE K+TFP+SLKQPGPR+ +QCFIKR++ TQ+Y+
Sbjct: 66 RSVVACAGVCRGWRLLMNETVVVPEISSKLTFPISLKQPGPRDSLVQCFIKRNRITQSYH 125
Query: 145 LYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKF 204
LYL L+++ L + GKFLL+A + TCT+Y I + +D+ SR S Y+GK+RSN LGTKF
Sbjct: 126 LYLGLTNS-LTDDGKFLLAACKLKHTTCTDYIISLRSDDMSRRSQAYVGKVRSNFLGTKF 184
Query: 205 VIYDTQ--PPCNTANVSQSGKTSRRFYSRKVSPKNPSSTYSIAQVSYELNVLGTRGPRRM 262
++D P A + + SR + KVS K P +Y +A ++YELNVLG+RGPR+M
Sbjct: 185 TVFDGNLLPSTGAAKL----RKSRSYNPAKVSAKVPLGSYPVAHITYELNVLGSRGPRKM 240
Query: 263 NCVMHSIPASSLEAGGTVPCQPD--------SVLARSLDEXXXXXXXXXXXXMDRSIRFS 314
C+M +IP S++E G V +P S L+RS + +R S
Sbjct: 241 QCLMDTIPTSTMEPQG-VASEPSEFPLLGTRSTLSRS---------------QSKPLRSS 284
Query: 315 SSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCWCLNFKGRVTVASVK 374
SS KE PL+L NK PRWHEQL+CWCLNF GRVTVASVK
Sbjct: 285 SSHL---------------------KETPLVLSNKTPRWHEQLRCWCLNFHGRVTVASVK 323
Query: 375 NFQLVXXXXXXXXXXXXXXXXXXXXXDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAIC 434
NFQLV +++ILQFGKV KDMFTMDY YP+SAFQAFAIC
Sbjct: 324 NFQLV-----AAGASCGSGTGMSPERQSERIILQFGKVGKDMFTMDYGYPISAFQAFAIC 378
Query: 435 LSSFDTKLACE 445
LSSF+T++ACE
Sbjct: 379 LSSFETRIACE 389
>AT1G53320.1 | chr1:19891237-19893429 REVERSE LENGTH=380
Length = 379
Score = 322 bits (824), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 173/399 (43%), Positives = 228/399 (57%), Gaps = 61/399 (15%)
Query: 52 DVVQSSCWANLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFC 111
++ SS W+ + PELL ++I R+E +E WP R++VV CA V + WR++ + ++
Sbjct: 37 NMAGSSSWSAMLPELLGEIIRRVEETEDRWPQRRDVVTCACVSKKWREITHDFARSSLNS 96
Query: 112 GKITFPVSLKQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRAT 171
GKITFP LK PGPR+ + QC IKR+K T T+ LYL L+ + + GKFLL+A+R+
Sbjct: 97 GKITFPSCLKLPGPRDFSNQCLIKRNKKTSTFYLYLALTPS-FTDKGKFLLAARRFRTGA 155
Query: 172 CTEYTIFMSADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSR 231
TEY I + AD+ S+ SN Y+GKLRS+ LGT F +YD+QPP N A S +GK SRRF S+
Sbjct: 156 YTEYIISLDADDFSQGSNAYVGKLRSDFLGTNFTVYDSQPPHNGAKPS-NGKASRRFASK 214
Query: 232 KVSPKNPSSTYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTV-----PCQPDS 286
++SP+ P+ + + VSY+ N+L +RGPRRM + S + + PC
Sbjct: 215 QISPQVPAGNFEVGHVSYKFNLLKSRGPRRMVSTLRCPSPSPSSSSAGLSSDQKPCDVTK 274
Query: 287 VLARSLDEXXXXXXXXXXXXMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLIL 346
++ + P G +L IL
Sbjct: 275 IMKK-----------------------------------PNKDGSSL----------TIL 289
Query: 347 RNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVXXXXXXXXXXXXXXXXXXXXXDHDKVI 406
+NKAPRWHE LQCWCLNF GRVTVASVKNFQLV D + V+
Sbjct: 290 KNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLV---------ATVDQSQPSGKGDEETVL 340
Query: 407 LQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLACE 445
LQFGKV D FTMDYR PLSAFQAFAICL+SF TKLACE
Sbjct: 341 LQFGKVGDDTFTMDYRQPLSAFQAFAICLTSFGTKLACE 379
>AT1G61940.1 | chr1:22897399-22898575 REVERSE LENGTH=245
Length = 244
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 46/61 (75%)
Query: 62 LPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSLK 121
+PPELLRDV+ R+E SE WPSRKNVV+C VC+ WR + +EIV PE K TFP+SLK
Sbjct: 1 MPPELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLK 60
Query: 122 Q 122
Q
Sbjct: 61 Q 61
>AT1G16070.2 | chr1:5511899-5513779 REVERSE LENGTH=399
Length = 398
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 22/112 (19%)
Query: 338 ESKERPLILRNKAPRWHEQLQCWCLNFK--GRVTV---ASVKNFQLVXXXXXXXXXXXXX 392
E+KE+ L ++ P +++ + L+F+ GR + +SVKNFQL
Sbjct: 302 ENKEKIQKLCSRIPHYNKISKQHELDFRDRGRTGLRIQSSVKNFQLTLTQETPR------ 355
Query: 393 XXXXXXXXDHDKVILQFGKVAKDMFTMDYRYPLSAFQAFAICLSSFDTKLAC 444
+ ILQ G+V K + +D+RYP S +QAF ICL+S D+KL C
Sbjct: 356 -----------QTILQMGRVDKARYVIDFRYPFSGYQAFCICLASIDSKLCC 396
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.133 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,657,777
Number of extensions: 320958
Number of successful extensions: 791
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 760
Number of HSP's successfully gapped: 16
Length of query: 445
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 343
Effective length of database: 8,310,137
Effective search space: 2850376991
Effective search space used: 2850376991
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)