BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os12g0158600 Os12g0158600|J065205E01
         (161 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36020.1  | chr2:15123424-15125140 REVERSE LENGTH=259          144   2e-35
AT1G75700.1  | chr1:28423956-28424931 FORWARD LENGTH=178          142   8e-35
AT5G42560.1  | chr5:17015573-17016969 FORWARD LENGTH=297          141   2e-34
AT1G19950.1  | chr1:6925043-6926527 FORWARD LENGTH=316            135   8e-33
AT4G36720.1  | chr4:17307769-17309668 FORWARD LENGTH=201           62   2e-10

>AT2G36020.1 | chr2:15123424-15125140 REVERSE LENGTH=259
          Length = 258

 Score =  144 bits (362), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 64/131 (48%), Positives = 91/131 (69%), Gaps = 4/131 (3%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESL----ISWMPMYGEIKLA 69
            GY  PAFECFKTVE    D   LRFWCQYWI++A++ +FE +    ISW+P+YGE+K+ 
Sbjct: 14  LGYTYPAFECFKTVEKNKVDIEELRFWCQYWILLALISSFERVGDFFISWLPLYGEMKVV 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
           FFVYLWYPKTKG+  VY+T L+P + Q+E  I+++++ LRA++     FY  NFA  G +
Sbjct: 74  FFVYLWYPKTKGTRHVYETLLKPYMAQHETEIDRKIMELRARAWDFFIFYFNNFAQAGQS 133

Query: 130 FFMDVLRYVVS 140
             +   +YV++
Sbjct: 134 TLIQGFQYVLA 144



>AT1G75700.1 | chr1:28423956-28424931 FORWARD LENGTH=178
          Length = 177

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 62/140 (44%), Positives = 92/140 (65%), Gaps = 4/140 (2%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFE----SLISWMPMYGEIKLA 69
           FGYA PA+ECFKTVE    +   L+FWCQYWIIVA +  FE    +L+SW+PMY E KLA
Sbjct: 14  FGYAYPAYECFKTVELNKPEIQQLQFWCQYWIIVAALTIFERIGDALVSWLPMYSEAKLA 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
           FF+YLW+PKTKG+  VYD+F RP + ++E  I++ L+ ++ ++  +   Y++   ++G  
Sbjct: 74  FFIYLWFPKTKGTTYVYDSFFRPYIAKHENEIDRNLVKVKTRAKDMAMIYLQKAINQGQT 133

Query: 130 FFMDVLRYVVSDKPEGSNQE 149
            F ++L+Y+       S  E
Sbjct: 134 KFFEILQYITEQSTPKSKAE 153



>AT5G42560.1 | chr5:17015573-17016969 FORWARD LENGTH=297
          Length = 296

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 88/132 (66%), Gaps = 4/132 (3%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFESL----ISWMPMYGEIKLA 69
            GYA PA+EC+KTVE    +   LRFWCQYWI+VA +  FE +    +SW+PMY E KLA
Sbjct: 14  LGYAYPAYECYKTVEKNRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYSEAKLA 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
           FF+YLWYPKT+G+  VY++F RP + Q+E +I+  LL LR ++G +   Y +  A  G  
Sbjct: 74  FFIYLWYPKTRGTTYVYESFFRPYLSQHENDIDHSLLELRTRAGDMAVIYWQRVASYGQT 133

Query: 130 FFMDVLRYVVSD 141
             +++L+YV + 
Sbjct: 134 RILEILQYVAAQ 145



>AT1G19950.1 | chr1:6925043-6926527 FORWARD LENGTH=316
          Length = 315

 Score =  135 bits (341), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 60/130 (46%), Positives = 85/130 (65%), Gaps = 4/130 (3%)

Query: 14  FGYAMPAFECFKTVEARPNDAHMLRFWCQYWIIVAMVIAFE----SLISWMPMYGEIKLA 69
           FGYA PA+EC+K VE    +   LRFWCQYWI+VA +  FE    +L SW+P+Y E KLA
Sbjct: 14  FGYAYPAYECYKAVEKNKPEMQQLRFWCQYWILVAALTIFERVGDALASWVPLYCEAKLA 73

Query: 70  FFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQRLLHLRAKSGQLLSFYMKNFADKGTA 129
           FF+YLW+PKT+G+  VYD+F +P V ++E  I++ L+ LR K+G L   Y +     G  
Sbjct: 74  FFIYLWFPKTRGTTYVYDSFFQPYVAKHENEIDRSLIELRTKAGDLAVIYCRKAVSYGQT 133

Query: 130 FFMDVLRYVV 139
             +++L +V 
Sbjct: 134 RIVEILHFVA 143



>AT4G36720.1 | chr4:17307769-17309668 FORWARD LENGTH=201
          Length = 200

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 14  FGYAMPAFECFKTVEARPNDAH--MLRFWCQYWIIVAMVIAFESLISWMPMYGEIKLAFF 71
            G  +P +  FK +E+   +    ML +W  Y     + +  + +ISW P+Y  +K AF 
Sbjct: 44  IGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFAFL 103

Query: 72  VYLWYPKTKGSDVVYDTFLRPIVMQYEPNIEQ 103
           V+L  P  +GS  +Y+  +RP +++++  ++Q
Sbjct: 104 VWLQLPTVEGSKQIYNNQIRPFLLRHQARVDQ 135



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.329    0.141    0.459 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 3,224,054
Number of extensions: 122156
Number of successful extensions: 335
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 331
Number of HSP's successfully gapped: 7
Length of query: 161
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 70
Effective length of database: 8,611,713
Effective search space: 602819910
Effective search space used: 602819910
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 107 (45.8 bits)