BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0156800 Os12g0156800|Os12g0156800
(1556 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341 140 5e-33
AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510 114 3e-25
AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668 110 8e-24
AT1G64260.1 | chr1:23847756-23849915 FORWARD LENGTH=720 103 7e-22
AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479 99 1e-20
AT1G64255.1 | chr1:23844954-23847206 FORWARD LENGTH=751 98 4e-20
AT1G49920.1 | chr1:18481798-18484233 REVERSE LENGTH=786 93 1e-18
>AT1G48120.1 | chr1:17774238-17779624 REVERSE LENGTH=1341
Length = 1340
Score = 140 bits (354), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 180/401 (44%), Gaps = 58/401 (14%)
Query: 946 VDRSLLAALVDRWRPETHTFHLPCGEVAPTLQDVSYLLGLPLAGDAVGPVTTAVDWQD-- 1003
+D +L+ ALV+RWRPETHTFHLP GE+ TLQDV+ LLGL + G AV +T +W D
Sbjct: 80 LDYALITALVERWRPETHTFHLPAGEITVTLQDVNILLGLRVDGPAVTG-STKYNWADLC 138
Query: 1004 -DLAARFTLVQRAPHLPFEPLAHHRNTGPTKRWLLQFTVEQLQAEADEYSYSRCLEAYLL 1062
DL H P H + + WL + L A+ DE + A++L
Sbjct: 139 EDLLG---------HRPGPKDLHGSHV--SLAWLRE-NFRNLPADPDEVTLKCHTRAFVL 186
Query: 1063 WLFGWVMFCGGHGHAVDKGLVHYARSIADAAVGEVPQWSWGSALLAALYRALCESCTKTD 1122
L ++ H V + R EV + SWGSA LA LYR LC + +T
Sbjct: 187 ALMSGFLYGDKSKHDVALTFLPLLRDF-----DEVAKLSWGSATLALLYRELCRASKRT- 240
Query: 1123 PSATFGGCPLFLSIWAAEKIAIGRPEVDQHAYEESLYEERPEVDYPTMGTLWCRRQRRWA 1182
+T G + L +WA E++ +GRP + + +D P L CR + +
Sbjct: 241 -VSTICGPLVLLQLWAWERLHVGRPGRLKDVGASYM----DGIDGPLPDPLGCRWRASLS 295
Query: 1183 HVQVRRSYPEFVME-FDRLLPTDVVWEPYSATATQARAPLGLSTLCTRDQAYWMTTVPMV 1241
H + R +F + FD+ V+W+PY+ A+ PL +C + W T P++
Sbjct: 296 HKENPRGGLDFYRDQFDQQKDEQVIWQPYTPDLL-AKIPL----ICVSGENIWRTVAPLI 350
Query: 1242 -FDICVEPHAPFRVMRQFGF---------------------RTRARVSSQLATFVEDWLL 1279
FD+ VE H P RV+RQFG ++ S++ + + W
Sbjct: 351 CFDV-VEWHRPDRVLRQFGLHQTIPAPCDNEKALHAIDKRGKSEYDWSARHSRHIGLWEA 409
Query: 1280 ATEEVVDHEGEPHTEESYQAYLRWYQPRTRTRVTFAPLEQQ 1320
VV E E + Y+ WY R TR +P+ ++
Sbjct: 410 RVSSVVSGEPECSPMDYNDPYMEWY--RRITRRIISPMNER 448
>AT2G25010.1 | chr2:10631691-10633547 FORWARD LENGTH=510
Length = 509
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 173/397 (43%), Gaps = 61/397 (15%)
Query: 945 TVDRSLLAALVDRWRPETHTFHLPCGEVAPTLQDVSYLLGLPLAGDAVGPVTTAVDWQDD 1004
+++ SL++ALV+RWR ET+TFHLP GE+ TL +V+ +LGL + GD + + D
Sbjct: 70 SLNNSLISALVERWRRETNTFHLPLGEMTITLDEVALVLGLEIDGDPIVGSKVGDEVAMD 129
Query: 1005 LAARFTLVQRAPHLPFEPLAHHRNTGPTKRWLLQFTVEQLQAEADEYSYSRC-LEAYLLW 1063
+ R L+ + P + + N K L+ T + +A + +C AYLL+
Sbjct: 130 MCGR--LLGKLPSAANKEV----NCSRVKLNWLKRTFSECPEDA-SFDVVKCHTRAYLLY 182
Query: 1064 LFGWVMFCGGHGHAVDKGLVHYARSIADAAVGEVPQWSWGSALLAALYRALCESCTKTDP 1123
L G +F G DK V Y D + +++WG+A LA LYRAL + K+
Sbjct: 183 LIGSTIFATTDG---DKVSVKYLPLFED--FDQAGRYAWGAAALACLYRALGNASLKS-- 235
Query: 1124 SATFGGCPLFLSIWAAEKIAIGRPEVDQHAYEESLYEERPEVDYPTMGTLWCRRQRRWAH 1183
+ GC L W+ + IGRP E+ E +P + LW + R
Sbjct: 236 QSNICGCLTLLQCWSYFHLDIGRP-------------EKSEACFP-LALLWKGKGSR--- 278
Query: 1184 VQVRRSYPEFVMEFDRLLPTDVVWEPYSATATQARAPLGLSTLCTRDQAYWMTTVPMVFD 1243
+ E+ E D L P+ + W PY + + R + T + F+
Sbjct: 279 --SKTDLSEYRRELDDLDPSKITWCPYERFENLIPPHIKAKLILGRSK-----TTLVCFE 331
Query: 1244 ICVEPHAPFRVMRQFGFRT--------RAR-------VSSQLATFVEDWLLATEEVVDHE 1288
+E H P R +RQFG R R R + + ++ E+W + +VD
Sbjct: 332 K-IELHFPDRCLRQFGKRQPIPLKVKRRDRKNRRLDDLDTSMSLACEEWAERGDHIVDSP 390
Query: 1289 GEPHTEESYQAYLRWYQPRTRTRVTFAPLEQQPHVAS 1325
G + + AY+ WY R++ L ++ + S
Sbjct: 391 GGGNVVDD-GAYMEWY-----ARISITKLYREAFLES 421
>AT2G04865.1 | chr2:1712149-1714599 FORWARD LENGTH=668
Length = 667
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 178/414 (42%), Gaps = 63/414 (15%)
Query: 945 TVDRSLLAALVDRWRPETHTFHLPCGEVAPTLQDVSYLLGLPLAGDAVGPVTTAVDWQDD 1004
++D L++ALV+RWR ET+TFH GE+ TL+D++ LLGL + G V +T
Sbjct: 72 SLDNPLISALVERWRRETNTFHFTVGEMTVTLEDIALLLGLGIDGKPVIGLT-------- 123
Query: 1005 LAARFTLVQRAPHLPFEPLAHHRNTGPTKRWLLQFTVEQLQAEADEYSYSRCLEAYLLWL 1064
+ +R +L P ++ + G K L+ + +A R AYLL+L
Sbjct: 124 YTTCSAVCER--YLGKSPASNSASGGMVKLSWLKDNFSECPDDASFEEVERRTRAYLLYL 181
Query: 1065 FGWVMFCGGHGHAVDKGLVHYARSIADAAVGEVPQWSWGSALLAALYRALCESCTKTDPS 1124
G +F G+ V + DA ++WG+A LA LYRAL + K+
Sbjct: 182 VGSTIFSTTTGNKVPVMYLPLFEDFDDAGT-----FAWGAAALAFLYRALGNASVKS--Q 234
Query: 1125 ATFGGCPLFLSIWAAEKIAIGRPEVDQHAYEESLYEERPEVDYPTMGTLWCRRQRRWAHV 1184
+T GC L W+ + IGRP++++ E ++++ P V W +Q
Sbjct: 235 STICGCLTLLQCWSYYHLNIGRPKLNR----EPIHDQFPFV------LKWKGKQN---GP 281
Query: 1185 QVRRSYPEFVMEFDRLLPTDVVWEPY-SATATQARAPLGLSTLCTRDQAYWMTTVPMVFD 1243
R + D + PTDVVW PY + + S L R + T+ + FD
Sbjct: 282 TANRDVVFYRKALDVMKPTDVVWLPYENMNGGDMSDRMRKSLLLGRSK-----TMLISFD 336
Query: 1244 ICVEPHAPFRVMRQF------------------GFRTRARVSSQLATFVEDWLLATEEVV 1285
E H P R +QF G +S+++ + + +W + E +V
Sbjct: 337 KA-ERHLPDRCRKQFDLFQDIPADVQRWVRKSRGVDGGVDLSNKMESELSEWEMRWENIV 395
Query: 1286 DHEGEPHTEESYQAYLRWYQPRTRTRVTFAPL----EQQPHVASTRDLYARHRN 1335
+ + E Y+RWY TR ++ P+ E Q +++ RD+ N
Sbjct: 396 PDDVQGVDEAD---YMRWYLGITR-KIVGRPISLSSEFQRTISNVRDILELAEN 445
>AT1G64260.1 | chr1:23847756-23849915 FORWARD LENGTH=720
Length = 719
Score = 103 bits (257), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 170/405 (41%), Gaps = 74/405 (18%)
Query: 388 HPGKSVLQRAFLALHACKMAFVNCRPVLCIDGTFLTGKYRGQILTAIGVDGNNQVLPLAF 447
+P + + F + F +CRP++ +D L GKY+ +++ A GVD N+ PLAF
Sbjct: 352 NPDFASFRGVFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLMIASGVDAANKFFPLAF 411
Query: 448 AFVESENTDSWYWFLKLVKTKVVGMRPNVCLIHDRHAGILRAIGELQFGSMERGYPSVWE 507
A + +TDSW WF ++ KV R ++CLI I+ + E S+W+
Sbjct: 412 AVTKEVSTDSWRWFFTKIREKVT-QRKDLCLISSPLRDIVAVVNEPG---------SLWQ 461
Query: 508 D--VQSRWCMRHMGANFFKQFKNKELMNMFKRLCNQNQEKKFNELWKRLDELTAKCSDQR 565
+ ++C+ H+ + F F++ L ++ ++ + NQ+++F+ + E
Sbjct: 462 EPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKN------- 514
Query: 566 AAAPSTAVADPPQALGPLPMDSPTLVRRTGLEIRKLSQWILHEPKEKWAKAYDTGGARYG 625
P+A +W+ P+ KWA A+D+ G RYG
Sbjct: 515 -----------PEAW----------------------KWLDQIPRHKWALAHDS-GLRYG 540
Query: 626 IMTTNLAEIYNWVMRGVRGLPLVGIVE----FILHGTCRYFRDRFQAVLPSMPNNSILFG 681
I+ + ++ RG P + ++ R D+ + + S N +++
Sbjct: 541 IIEIDREALF----AVCRGFPYCTVAMTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVYT 596
Query: 682 AFMQKKLEELRKKAMKHRALVQGTQQHRFEILCQDKAGRGIYRKRVKQECVLKADGTCHC 741
KLEE ++ + ++ ++ F+ + K+E +++ + + C
Sbjct: 597 EPFMDKLEEFMTDSIPY--VITQLERDSFK----------VSESSEKEEWIVQLNVST-C 643
Query: 742 SCAKPKLLHRPCTHVIAAAAECGIPDAVYVSQYFSKQAIYHTWSG 786
+C K + PC H +A + I YV + ++ + T++
Sbjct: 644 TCRKFQSYKFPCLHALAVFEKLKINPLQYVDECYTVEQYCKTYAA 688
>AT1G17930.1 | chr1:6166638-6168432 REVERSE LENGTH=479
Length = 478
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 162/380 (42%), Gaps = 60/380 (15%)
Query: 945 TVDRSLLAALVDRWRPETHTFHLPCGEVAPTLQDVSYLLGLPLAGDAVGPVTTAVDWQDD 1004
+++ SL++ALV+RWR ET+TFH PCGE+ TL +VS +LGL + G V V +D+
Sbjct: 61 SLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVDGKPV----VGVKEKDE 116
Query: 1005 LAARFTLVQRAPHLPFEPLAHHRNTGPTKRWLLQFTVEQLQ-AEADEYSYSRCLEAYLLW 1063
++ L + LP L+ +R T +WL + E + A E Y AYL++
Sbjct: 117 DPSQVCL-RLLGKLPKGELSGNRVTA---KWLKESFAECPKGATMKEIEYHT--RAYLIY 170
Query: 1064 LFGWVMFCGGHGHAVDKGLVHYARSIADAAVGEVPQWSWGSALLAALYRALCESCTKTDP 1123
+ G +F D + I + +++WG+A LA LYR + + ++
Sbjct: 171 IVGSTIFA-----TTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIGNASQRS-- 223
Query: 1124 SATFGGCPLFLSIWAAEKIAIGRPEVDQHAYEESLYEERPEVDYPTMGTLWCRRQRRWAH 1183
+ GGC L W+ + I RP +R +P + LW RQ+
Sbjct: 224 QSIIGGCLTLLQCWSYFHLNIDRP-------------KRTTRQFP-LALLWKGRQQS--- 266
Query: 1184 VQVRRSYPEFVMEFDRLLPTDVVWEPYSATATQARAPLGLSTLCTRDQAYWMTTVPMVFD 1243
+ + ++ D L P++V W P+ + L R + ++
Sbjct: 267 -RSKNDLFKYRKALDDLDPSNVSWCPFEGDLDIVPQSFKDNLLLGRSR------TKLIGP 319
Query: 1244 ICVEPHAPFRVMRQFGF----------RTRAR-----VSSQLATFVEDWLLATEEVVDHE 1288
VE H P R M+QFG R + + + T E+W+ E +V++
Sbjct: 320 KVVEWHFPDRCMKQFGLCQVIPGEVPPRKNEKNHDEDLLEDMNTADEEWMRRRENIVENG 379
Query: 1289 GEPHTEESYQAYLRWYQPRT 1308
G E Y++W+ T
Sbjct: 380 GGNGDESE---YMQWFNSIT 396
>AT1G64255.1 | chr1:23844954-23847206 FORWARD LENGTH=751
Length = 750
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 158/406 (38%), Gaps = 64/406 (15%)
Query: 382 KFPSIEHPGKSVLQRAFLALHACKMAFVNCRPVLCIDGTFLTGKYRGQILTAIGVDGNNQ 441
K+ +P + F A F +CRP++ +D L +Y+ +++ A GVD N+
Sbjct: 353 KYDLFPNPNFASFCGVFWAFPQSIEGFQHCRPLIVVDTKNLNCEYQLKLMIASGVDAANK 412
Query: 442 VLPLAFAFVESENTDSWYWFLKLVKTKVVGMRPNVCLIHDRHAGILRAIGELQFGSMERG 501
PLAFA + +TD W WFL ++ KV R +CLI H I+ + E
Sbjct: 413 YFPLAFAVTKEVSTDIWRWFLTGIREKVT-QRKGLCLISSPHPDIIAVVNE--------- 462
Query: 502 YPSVWED--VQSRWCMRHMGANFFKQFKNKELMNMFKRLCNQNQEKKFNELWKRLDELTA 559
S W++ R+ + H + F + F + L +R + +Q+ DE +
Sbjct: 463 SGSQWQEPWAYHRFSLNHFYSQFSRVFPSFCLGARIRRAGSTSQK----------DEFVS 512
Query: 560 KCSDQRAAAPSTAVADPPQALGPLPMDSPTLVRRTGLEIRKLSQWILHEPKEKWAKAYDT 619
+D + P E RK W+ P+ +WA A+D
Sbjct: 513 YMNDIKEKNP---------------------------EARK---WLDQFPQNRWALAHD- 541
Query: 620 GGARYGIMTTNLAEIYNWVMRGVRGLPLVGIVEFILHGTCRYFRDRFQAVLPSMPNNSIL 679
G RYGIM N ++ + +V +L R D+ + S N +
Sbjct: 542 NGRRYGIMEINTKALFAVCNAFEQAGHVVTGSVLLLFDELRSKFDKSFSCSRSSLNCGDV 601
Query: 680 FGAFMQKKLEELRKKAMKHRALVQGTQQHRFEILCQDKAGRGIYRKRVKQECVLKADGTC 739
+ + KLEE R + + +V + F++ G EC+++ C
Sbjct: 602 YTEPVMDKLEEFRTTFVTYSYIVTPLDNNAFQVATALDKG----------ECIVQL-SDC 650
Query: 740 HCSCAKPKLLHRPCTHVIAAAAECGIPDAVYVSQYFSKQAIYHTWS 785
C+C + PC H +A + YV ++ + + T++
Sbjct: 651 SCTCGDFQRYKFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYA 696
>AT1G49920.1 | chr1:18481798-18484233 REVERSE LENGTH=786
Length = 785
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 166/413 (40%), Gaps = 60/413 (14%)
Query: 382 KFPSIEH-PGKSVLQRAFLALHACKMAFVNCRPVLCIDGTFLTGKYRGQILTAIGVDGNN 440
++ S+ H P + + F A F +CRP++ +D L GKY+ +++ A D N
Sbjct: 348 QYDSLTHDPEHASFRGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYKMKLMIASAFDATN 407
Query: 441 QVLPLAFAFVESENTDSWYWFLKLVKTKVVGMRPNVCLIHDRHAGILRAIGELQFGSMER 500
Q PLAFA + + DSW WFL ++ KV R +CLI IL I E
Sbjct: 408 QYFPLAFAVTKEVSVDSWRWFLTRIREKVT-QRQGICLISSPDPDILAVINEPG------ 460
Query: 501 GYPSVWED--VQSRWCMRHMGANFFKQFK--NKELMNMFKRLCNQNQEKKFNELWKRLDE 556
S W++ R+C+ H+ + + + + + +Q+++F+ K + E
Sbjct: 461 ---SQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDSYMKEIKE 517
Query: 557 LTAKCSDQRAAAPSTAVADPPQALGPLPMDSPTLVRRTGLEIRKLSQWILHEPKEKWAKA 616
P+A +W+ P +WA A
Sbjct: 518 RN------------------PEAW----------------------KWLDQFPPHQWALA 537
Query: 617 YDTGGARYGIMTTNLAEIYNWVMRGVRGLPLVGIVEFILHGTCRYFRDRFQAVLPSMPNN 676
+D G RYGIM + ++ V + R + + G V + F + F+ S+ +
Sbjct: 538 HD-DGRRYGIMRIDTEALFA-VCKRFRKVAMAGGVMLLFGQLKDAFAESFKLSRGSLKHG 595
Query: 677 SILFGAFMQKKLEELRKKAMKHRALVQGTQQHRFEI-LCQDKAGRGIYRKRVKQECVLKA 735
+ + + +KLEE + + ++ +++ + K R + + +++
Sbjct: 596 DV-YTEHVMEKLEEFETDSDTWVITITPLERDAYQVSMAPKKKTRLMGQSNDSTSGIVQL 654
Query: 736 DGTCHCSCAKPKLLHRPCTHVIAAAAECGIPDAVYVSQYFSKQAIYHTWSGEI 788
+ T C+C + + PC H +A E I YV ++ + + T+S +
Sbjct: 655 NDTT-CTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKF 706
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 35,448,979
Number of extensions: 1578808
Number of successful extensions: 4687
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 4673
Number of HSP's successfully gapped: 7
Length of query: 1556
Length of database: 11,106,569
Length adjustment: 112
Effective length of query: 1444
Effective length of database: 8,035,977
Effective search space: 11603950788
Effective search space used: 11603950788
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 118 (50.1 bits)