BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0150700 Os12g0150700|Os12g0150700
(114 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G52820.1 | chr3:19574236-19576938 REVERSE LENGTH=435 127 1e-30
AT3G52810.1 | chr3:19571089-19573640 REVERSE LENGTH=438 127 1e-30
AT3G52780.1 | chr3:19561525-19564195 REVERSE LENGTH=428 117 1e-27
AT3G20500.1 | chr3:7157926-7160244 FORWARD LENGTH=438 116 2e-27
AT3G07130.1 | chr3:2255763-2257981 REVERSE LENGTH=533 92 6e-20
AT2G18130.1 | chr2:7879308-7883935 REVERSE LENGTH=442 91 9e-20
AT1G56360.1 | chr1:21098603-21100842 REVERSE LENGTH=467 90 2e-19
AT1G52940.1 | chr1:19716402-19723716 FORWARD LENGTH=397 90 3e-19
AT3G46120.1 | chr3:16935921-16939766 REVERSE LENGTH=389 87 1e-18
AT4G36350.1 | chr4:17173737-17175857 REVERSE LENGTH=467 86 6e-18
AT5G34850.1 | chr5:13108475-13111217 REVERSE LENGTH=476 81 1e-16
AT2G32770.3 | chr2:13895838-13898203 FORWARD LENGTH=546 80 3e-16
AT2G27190.1 | chr2:11621400-11623438 REVERSE LENGTH=470 80 3e-16
AT2G16430.2 | chr2:7120502-7122772 REVERSE LENGTH=469 78 1e-15
AT4G13700.1 | chr4:7957072-7958919 REVERSE LENGTH=459 75 9e-15
>AT3G52820.1 | chr3:19574236-19576938 REVERSE LENGTH=435
Length = 434
Score = 127 bits (319), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEANSQGPMYITIGDGGNVDGHSDKFIEDHE 60
ME LL++ARVDVVFS HVHAYERF R+Y+N+A+ GP++ITIGDGGN +G + F +
Sbjct: 313 MESLLFNARVDVVFSGHVHAYERFKRVYNNKADPCGPIHITIGDGGNREGLALSFKK--P 370
Query: 61 LAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVLESM 108
+ LSEFRE SFGHGRL+++ +A W+WHRN+D ++ + D V L+S+
Sbjct: 371 PSPLSEFRESSFGHGRLKVMDGKRAHWSWHRNNDSNSLLADEVWLDSL 418
>AT3G52810.1 | chr3:19571089-19573640 REVERSE LENGTH=438
Length = 437
Score = 127 bits (319), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/107 (56%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEANSQGPMYITIGDGGNVDGHSDKFIEDHE 60
+E LLY A+VDVVF+ HVH YERF IY+ +A+ GPMYITIGDGGN +G + +F +
Sbjct: 317 LESLLYRAQVDVVFAGHVHTYERFKPIYNKKADPCGPMYITIGDGGNREGLALRFKKPQ- 375
Query: 61 LAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVLES 107
+ LSEFRE SFGHGRLRI+ +A W+WHRN+D+ +++ D V ES
Sbjct: 376 -SPLSEFRESSFGHGRLRIIDHKRAHWSWHRNNDEMSSIADEVSFES 421
>AT3G52780.1 | chr3:19561525-19564195 REVERSE LENGTH=428
Length = 427
Score = 117 bits (294), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEANSQGPMYITIGDGGNVDGHSDKFIEDHE 60
ME LLY ARVD+VF+ HVHAYERF+R+Y ++ + GP+YI IGDGGN++G + K+ + +
Sbjct: 314 METLLYKARVDLVFAGHVHAYERFSRVYQDKFDKCGPVYINIGDGGNLEGLATKYRDPN- 372
Query: 61 LAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVLESM 108
+S FRE SFGHG+L + + T A W WHRNDD + +D V L S+
Sbjct: 373 -PEISLFREASFGHGQLVVENATHARWEWHRNDDDVSVEKDSVWLTSL 419
>AT3G20500.1 | chr3:7157926-7160244 FORWARD LENGTH=438
Length = 437
Score = 116 bits (291), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEANSQGPMYITIGDGGNVDGHSDKFIEDHE 60
MEPLLY + VD+VF+ HVHAYER R+ + +++ GP++ITIGDGGN +G + K+ +
Sbjct: 312 MEPLLYASGVDIVFTGHVHAYERTKRVNNGKSDPCGPVHITIGDGGNREGLARKYKDPS- 370
Query: 61 LAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVLESMAGA 111
S FRE SFGHG L++V+ T A+WTWHRNDD T D V L S+ +
Sbjct: 371 -PEWSVFREASFGHGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNSLVNS 420
>AT3G07130.1 | chr3:2255763-2257981 REVERSE LENGTH=533
Length = 532
Score = 91.7 bits (226), Expect = 6e-20, Method: Composition-based stats.
Identities = 53/137 (38%), Positives = 69/137 (50%), Gaps = 33/137 (24%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEANSQGPMYITIGDGGNVDGH--------- 51
ME LLY D+VF+ HVHAYER R+Y+ E + GP+YI IGDGGN +
Sbjct: 380 MEELLYSYGTDIVFNGHVHAYERSNRVYNYELDPCGPVYIVIGDGGNREKMAIEHADDPG 439
Query: 52 -----------------------SDKFIEDHELAHLSEFREMSFGHGRLRIVSETKAIWT 88
SDKF D + + S RE SFGHG L + +ET A+WT
Sbjct: 440 KCPEPLTTPDPVMGGFCAWNFTPSDKFCWDRQPDY-SALRESSFGHGILEMKNETWALWT 498
Query: 89 WHRNDDQHATVRDVVVL 105
W+RN D + V D + +
Sbjct: 499 WYRNQDSSSEVGDQIYI 515
>AT2G18130.1 | chr2:7879308-7883935 REVERSE LENGTH=442
Length = 441
Score = 91.3 bits (225), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEAN-----------SQGPMYITIGDGGNVD 49
EP + +VD+VF+ HVHAYER RI + N P+YITIGDGGN++
Sbjct: 316 FEPWFVENKVDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQNAPIYITIGDGGNIE 375
Query: 50 GHSDKFIEDHELAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVLE 106
G ++ F + S FRE SFGH L I + T A +TWHRN + A + D + L+
Sbjct: 376 GIANSFTDPQ--PSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWLK 430
>AT1G56360.1 | chr1:21098603-21100842 REVERSE LENGTH=467
Length = 466
Score = 90.1 bits (222), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 66/116 (56%), Gaps = 13/116 (11%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEAN-----------SQGPMYITIGDGGNVD 49
E L +++VD+V S HVHAYER RI + + N P+YITIGDGGN++
Sbjct: 335 FESWLVNSKVDLVLSGHVHAYERSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIE 394
Query: 50 GHSDKFIEDHELAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVL 105
G ++ F++ S +RE SFGH L I++ T A +TWHRN D D ++L
Sbjct: 395 GIANSFVDPQ--PSYSAYREASFGHAVLEIMNRTHAQYTWHRNQDNEPVAADSIML 448
>AT1G52940.1 | chr1:19716402-19723716 FORWARD LENGTH=397
Length = 396
Score = 89.7 bits (221), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEAN-----------SQGPMYITIGDGGNVD 49
EP + +VD+VF+ HVHAYER R+ + + N P+YITIGDGGN++
Sbjct: 271 FEPWFVENKVDIVFAGHVHAYERSERVSNIQYNITDGMSTPVKDQNAPVYITIGDGGNIE 330
Query: 50 GHSDKFIEDHELAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVLES 107
G ++ F + S FRE SFGH L I + T A +TWHRN + A + D + L++
Sbjct: 331 GIANIFTDPQ--PSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWLKN 386
>AT3G46120.1 | chr3:16935921-16939766 REVERSE LENGTH=389
Length = 388
Score = 87.4 bits (215), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 17/122 (13%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEAN-----------SQGPMYITIGDGGNVD 49
EP + +VD+VF+ HVHAYER RI + + N P+YITIGDGGN++
Sbjct: 259 FEPWFVENKVDIVFAGHVHAYERSERISNIQYNITDGMSTPVKDQNAPVYITIGDGGNIE 318
Query: 50 GHSDKFIEDHELAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDD----QHATVRDVVVL 105
G ++ FI+ S FRE SFGH L I + T A +TWHRN + A + D + L
Sbjct: 319 GIANNFIDPQ--PSYSAFREASFGHAILEIKNRTHAHYTWHRNKEDEFIPEAVIADSIWL 376
Query: 106 ES 107
++
Sbjct: 377 KN 378
>AT4G36350.1 | chr4:17173737-17175857 REVERSE LENGTH=467
Length = 466
Score = 85.5 bits (210), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 13/116 (11%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEAN-----------SQGPMYITIGDGGNVD 49
E +++VD+V S HVH+YER R+ + + N P+YITIGDGGN++
Sbjct: 335 FESWFVNSKVDLVLSGHVHSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIE 394
Query: 50 GHSDKFIEDHELAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVL 105
G ++ F + S +RE SFGH L I + T A +TWHRN D D ++L
Sbjct: 395 GIANSFTDPQ--PSYSAYREASFGHAVLEIYNRTHAYYTWHRNQDNEPVAADSIML 448
>AT5G34850.1 | chr5:13108475-13111217 REVERSE LENGTH=476
Length = 475
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 9 RVDVVFSAHVHAYERFTRIYDNEAN-----------SQGPMYITIGDGGNVDGHSDKFIE 57
+VDV+F+ HVHAYER RI + N P+YIT+GDGGN +G + +F E
Sbjct: 341 KVDVIFAGHVHAYERSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTE 400
Query: 58 DHELAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVLESMAGAK 112
S FRE S+GH L I + T AI+ W+RNDD D VL + K
Sbjct: 401 PQ--PDYSAFREASYGHSTLDIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYWGK 453
>AT2G32770.3 | chr2:13895838-13898203 FORWARD LENGTH=546
Length = 545
Score = 79.7 bits (195), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 30/133 (22%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEANSQGPMYITIGDGG-------------N 47
+E LLY+ RVD+VF++HV AYER R+Y+ + GP+YIT G GG N
Sbjct: 400 LEDLLYNYRVDIVFNSHVDAYERSNRVYNYTLDQCGPVYITTGAGGAGKLETQHVDDPGN 459
Query: 48 VDGHSDKF-------------IEDH----ELAHLSEFREMSFGHGRLRIVSETKAIWTWH 90
+ S + ++D + S +RE SFG G L + +ET A+W+W+
Sbjct: 460 IPDPSQNYSCRSSGLNSTLEPVKDETCPVKQPEYSAYRESSFGFGILEVKNETHALWSWN 519
Query: 91 RNDDQHATVRDVV 103
RN D + DV+
Sbjct: 520 RNQDLYYLAADVI 532
>AT2G27190.1 | chr2:11621400-11623438 REVERSE LENGTH=470
Length = 469
Score = 79.7 bits (195), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 13/108 (12%)
Query: 9 RVDVVFSAHVHAYERFTRIYDNEAN-----------SQGPMYITIGDGGNVDGHSDKFIE 57
+VDVVF+ HVHAYER R+ + N P+YITIGDGGN +G ++
Sbjct: 348 KVDVVFAGHVHAYERSERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQ 407
Query: 58 DHELAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRDVVVL 105
S FRE SFGHG L I + T A ++W+RN D +A D V L
Sbjct: 408 PQ--PKYSAFREASFGHGLLEIKNRTHAYFSWNRNQDGNAVAADSVWL 453
>AT2G16430.2 | chr2:7120502-7122772 REVERSE LENGTH=469
Length = 468
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 56/104 (53%), Gaps = 13/104 (12%)
Query: 9 RVDVVFSAHVHAYERFTRIYDNEAN-----------SQGPMYITIGDGGNVDGHSDKFIE 57
+VDVVF+ HVHAYER R+ + N P+YITIGDGGN++G + K E
Sbjct: 347 KVDVVFAGHVHAYERSERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTE 406
Query: 58 DHELAHLSEFREMSFGHGRLRIVSETKAIWTWHRNDDQHATVRD 101
S FRE SFGH I + T A + WHRN D +A D
Sbjct: 407 PQ--PKYSAFREASFGHAIFSIKNRTHAHYGWHRNHDGYAVEGD 448
>AT4G13700.1 | chr4:7957072-7958919 REVERSE LENGTH=459
Length = 458
Score = 74.7 bits (182), Expect = 9e-15, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 43/65 (66%)
Query: 1 MEPLLYDARVDVVFSAHVHAYERFTRIYDNEANSQGPMYITIGDGGNVDGHSDKFIEDHE 60
ME LLY RVD+VF+ HVHAYER RIY+ + GP+YITIGDGGN++ F +D
Sbjct: 381 MEELLYQYRVDIVFAGHVHAYERMNRIYNYTLDPCGPVYITIGDGGNIEKVDVDFADDPG 440
Query: 61 LAHLS 65
H S
Sbjct: 441 KCHSS 445
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,528,082
Number of extensions: 98330
Number of successful extensions: 263
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 244
Number of HSP's successfully gapped: 16
Length of query: 114
Length of database: 11,106,569
Length adjustment: 83
Effective length of query: 31
Effective length of database: 8,831,041
Effective search space: 273762271
Effective search space used: 273762271
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 104 (44.7 bits)