BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0149300 Os12g0149300|AK110842
(463 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07720.1 | chr5:2455757-2457130 FORWARD LENGTH=458 563 e-160
AT1G74380.1 | chr1:27959848-27961221 FORWARD LENGTH=458 548 e-156
AT1G18690.1 | chr1:6435153-6436694 FORWARD LENGTH=514 508 e-144
AT3G62720.1 | chr3:23201326-23202708 FORWARD LENGTH=461 463 e-131
AT4G02500.1 | chr4:1101638-1103345 FORWARD LENGTH=462 460 e-130
AT4G37690.1 | chr4:17708303-17709601 FORWARD LENGTH=433 287 7e-78
AT2G22900.1 | chr2:9744359-9746193 REVERSE LENGTH=450 286 2e-77
AT4G38310.1 | chr4:17948482-17948844 FORWARD LENGTH=121 97 2e-20
>AT5G07720.1 | chr5:2455757-2457130 FORWARD LENGTH=458
Length = 457
Score = 563 bits (1450), Expect = e-160, Method: Compositional matrix adjust.
Identities = 267/418 (63%), Positives = 316/418 (75%), Gaps = 33/418 (7%)
Query: 10 AVRQQAARGKQMQRTFNNVKITLICGFITLLVLRGTVGINLLTYXXXXXXXXXXXXXXXX 69
VR+ RG+Q+Q+TFNNVK+T++CGF+T+LVLRGT+GIN T
Sbjct: 32 GVRRPPPRGRQIQKTFNNVKMTILCGFVTILVLRGTIGINFGT----------SDADVVN 81
Query: 70 XXXXXXXXXXLREIRSXXXXXXXXXXXXPLGVDXXXXXXXXXXXXXXXXXXXXXXXHTYT 129
L EIRS P D TYT
Sbjct: 82 QNIIEETNRLLAEIRSDSDPTDSNE---PPDSDLDLNM-------------------TYT 119
Query: 130 LGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATKNK 189
LGPK+T W+ KR+ WL++NP FPS GK ++LL+TGS P PCD+ GDHYLLK+ KNK
Sbjct: 120 LGPKITNWDQKRKLWLTQNPDFPSF-INGKAKVLLLTGSPPKPCDNPIGDHYLLKSVKNK 178
Query: 190 IDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMAFE 249
IDYCRIHGIEIV++MAHLD+ELAGYWAKLP++RRLMLSHPE+EW+WWMDSDALFTDM FE
Sbjct: 179 IDYCRIHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEIEWIWWMDSDALFTDMVFE 238
Query: 250 LPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRVRD 309
+PL+RY+ NLVIHGYP+LLF ++SWIALNTGSFL RNCQWSL+LLDAWAPMGPKG +R+
Sbjct: 239 IPLSRYENHNLVIHGYPDLLFDQKSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGPIRE 298
Query: 310 EAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEE 369
EAGK+LTA+L GRPAFEADDQSALI++LL+QKE WMEKV+VE++Y+LHGFW GLVDKYEE
Sbjct: 299 EAGKILTANLKGRPAFEADDQSALIYLLLSQKETWMEKVFVENQYYLHGFWEGLVDKYEE 358
Query: 370 MMERHHPGLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQVLRLYGF 427
MME++HPGLGDERWPF+THFVGCKPCG Y DY ERCL MERAFNFADNQVL+LYGF
Sbjct: 359 MMEKYHPGLGDERWPFITHFVGCKPCGSYADYAVERCLKSMERAFNFADNQVLKLYGF 416
>AT1G74380.1 | chr1:27959848-27961221 FORWARD LENGTH=458
Length = 457
Score = 548 bits (1413), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/408 (64%), Positives = 309/408 (75%), Gaps = 32/408 (7%)
Query: 20 QMQRTFNNVKITLICGFITLLVLRGTVGINLLTYXXXXXXXXXXXXXXXXXXXXXXXXXX 79
QMQ+TFNN+KIT++CGF+T+LVLRGT+G+ L
Sbjct: 42 QMQKTFNNIKITILCGFVTILVLRGTIGVGNLG---------SSSADAVNQNIIEETNRI 92
Query: 80 LREIRSXXXXXXXXXXXXPLGVDXXXXXXXXXXXXXXXXXXXXXXXHTYTLGPKVTRWNA 139
L EIRS P +D TY LGPK+T W++
Sbjct: 93 LAEIRSDSD---------PTDLDEPQEGDMNPNA-------------TYVLGPKITDWDS 130
Query: 140 KRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATKNKIDYCRIHGIE 199
+R+ WL++NP FPS GK RILL+TGS P PCD+ GDHYLLK+ KNKIDYCR+HGIE
Sbjct: 131 QRKVWLNQNPEFPST-VNGKARILLLTGSPPKPCDNPIGDHYLLKSVKNKIDYCRLHGIE 189
Query: 200 IVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMAFELPLARYDTSN 259
IV++MAHLD+ELAGYWAKLP++RRLMLSHPEVEW+WWMDSDALFTD+ F++PLARY N
Sbjct: 190 IVYNMAHLDKELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDALFTDILFQIPLARYQKHN 249
Query: 260 LVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRVRDEAGKVLTASL 319
LVIHGYP+LLF ++SWIALNTGSFLLRNCQWSL+LLDAWAPMGPKG +RDEAGKVLTA L
Sbjct: 250 LVIHGYPDLLFDQKSWIALNTGSFLLRNCQWSLDLLDAWAPMGPKGPIRDEAGKVLTAYL 309
Query: 320 TGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKYEEMMERHHPGLG 379
GRPAFEADDQSALI++LL+QK+ WMEKV+VE++Y+LHGFW GLVD+YEEM+E++HPGLG
Sbjct: 310 KGRPAFEADDQSALIYLLLSQKDTWMEKVFVENQYYLHGFWEGLVDRYEEMIEKYHPGLG 369
Query: 380 DERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQVLRLYGF 427
DERWPFVTHFVGCKPCG Y DY ERCL MERAFNFADNQVL+LYGF
Sbjct: 370 DERWPFVTHFVGCKPCGSYADYAVERCLKSMERAFNFADNQVLKLYGF 417
>AT1G18690.1 | chr1:6435153-6436694 FORWARD LENGTH=514
Length = 513
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 223/301 (74%), Positives = 267/301 (88%), Gaps = 1/301 (0%)
Query: 127 TYTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKAT 186
TYTLGPK+T W+++R+ WL++NP FP+ GK RILL+TGS P PCD G++YLLKA
Sbjct: 176 TYTLGPKITNWDSQRKVWLNQNPEFPNI-VNGKARILLLTGSSPGPCDKPIGNYYLLKAV 234
Query: 187 KNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDM 246
KNKIDYCR+HGIEIV++MA+LD EL+GYW KLP++R LMLSHPEVEW+WWMDSDALFTD+
Sbjct: 235 KNKIDYCRLHGIEIVYNMANLDEELSGYWTKLPMIRTLMLSHPEVEWIWWMDSDALFTDI 294
Query: 247 AFELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGR 306
FE+PL RY+ NLVIHGYP+LLF ++SW+ALNTG FLLRNCQWSL+LLDAWAPMGPKG+
Sbjct: 295 LFEIPLPRYENHNLVIHGYPDLLFNQKSWVALNTGIFLLRNCQWSLDLLDAWAPMGPKGK 354
Query: 307 VRDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDK 366
+RDE GK+LTA L GRPAFEADDQSALI++LL+QKE+W+EKVYVE++Y+LHGFW GLVD+
Sbjct: 355 IRDETGKILTAYLKGRPAFEADDQSALIYLLLSQKEKWIEKVYVENQYYLHGFWEGLVDR 414
Query: 367 YEEMMERHHPGLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQVLRLYG 426
YEEM+E++HPGLGDERWPFVTHFVGCKPCG Y DY +RC MERAFNFADNQVL+LYG
Sbjct: 415 YEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYADYAVDRCFKSMERAFNFADNQVLKLYG 474
Query: 427 F 427
F
Sbjct: 475 F 475
>AT3G62720.1 | chr3:23201326-23202708 FORWARD LENGTH=461
Length = 460
Score = 463 bits (1192), Expect = e-131, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 258/325 (79%)
Query: 128 YTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATK 187
Y+LGPK++ W+ +RR WL +NP FP+ A KPR+LLVTGS P PC++ GDHYLLK+ K
Sbjct: 117 YSLGPKISDWDEQRRDWLKQNPSFPNFVAPNKPRVLLVTGSAPKPCENPVGDHYLLKSIK 176
Query: 188 NKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMA 247
NKIDYCRIHGIEI ++MA LD E+AG+WAKLPL+R+L+LSHPE+E++WWMDSDA+FTDM
Sbjct: 177 NKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMV 236
Query: 248 FELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRV 307
FELP RY NLV+HG+ E+++ +++WI LNTGSFLLRN QWSL+LLDAWAPMGPKG++
Sbjct: 237 FELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNSQWSLDLLDAWAPMGPKGKI 296
Query: 308 RDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKY 367
R+EAGKVLT L RPAFEADDQSA++++L T++E+W KVY+E Y+LHG+W LVD+Y
Sbjct: 297 REEAGKVLTRELKDRPAFEADDQSAMVYLLATEREKWGGKVYLESGYYLHGYWGILVDRY 356
Query: 368 EEMMERHHPGLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQVLRLYGF 427
EEM+E H PG GD RWP VTHFVGCKPCG +GDYP ERCL M+RAFNF DNQ+L++YGF
Sbjct: 357 EEMIENHKPGFGDHRWPLVTHFVGCKPCGKFGDYPVERCLRQMDRAFNFGDNQILQMYGF 416
Query: 428 XXXXXXXXXXXXXXXXTDNPLVNKE 452
TD PL K+
Sbjct: 417 THKSLGSRRVKPTRNQTDRPLDAKD 441
>AT4G02500.1 | chr4:1101638-1103345 FORWARD LENGTH=462
Length = 461
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 257/325 (79%)
Query: 128 YTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKATK 187
YTLGPK++ W+ +R WL++NP FP+ KPR+LLVTGS P PC++ GDHYLLK+ K
Sbjct: 118 YTLGPKISDWDEQRSDWLAKNPSFPNFIGPNKPRVLLVTGSAPKPCENPVGDHYLLKSIK 177
Query: 188 NKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDMA 247
NKIDYCR+HGIEI ++MA LD E+AG+WAKLPL+R+L+LSHPE+E++WWMDSDA+FTDMA
Sbjct: 178 NKIDYCRLHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMA 237
Query: 248 FELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGRV 307
FELP RY NLV+HG+ E+++ +++WI LNTGSFLLRN QW+L+LLD WAPMGPKG++
Sbjct: 238 FELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNNQWALDLLDTWAPMGPKGKI 297
Query: 308 RDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDKY 367
R+EAGKVLT L RP FEADDQSA++++L TQ++ W KVY+E Y+LHG+W LVD+Y
Sbjct: 298 REEAGKVLTRELKDRPVFEADDQSAMVYLLATQRDAWGNKVYLESGYYLHGYWGILVDRY 357
Query: 368 EEMMERHHPGLGDERWPFVTHFVGCKPCGGYGDYPRERCLGGMERAFNFADNQVLRLYGF 427
EEM+E +HPGLGD RWP VTHFVGCKPCG +GDYP ERCL M+RAFNF DNQ+L++YGF
Sbjct: 358 EEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGF 417
Query: 428 XXXXXXXXXXXXXXXXTDNPLVNKE 452
T NPL K+
Sbjct: 418 THKSLASRKVKRVRNETSNPLEMKD 442
>AT4G37690.1 | chr4:17708303-17709601 FORWARD LENGTH=433
Length = 432
Score = 287 bits (735), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 200/337 (59%), Gaps = 39/337 (11%)
Query: 127 TYTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKAT 186
+Y++ +T+W+ KR QW +P F + RI++VTGSQ +PC + GDH LL+
Sbjct: 76 SYSIEKPITKWDEKRNQWFESHPSF---KPGSENRIVMVTGSQSSPCKNPIGDHLLLRCF 132
Query: 187 KNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDM 246
KNK+DY RIHG +I +S + L ++ YWAKLP+++ ML+HPE EW+WW+DSDA+FTDM
Sbjct: 133 KNKVDYARIHGHDIFYSNSLLHPKMNSYWAKLPVVKAAMLAHPEAEWIWWVDSDAIFTDM 192
Query: 247 AFELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGR 306
F+ PL RY NLV+HG+P +++ K+SW ALN G FL+RNCQWS++L+D W MGP
Sbjct: 193 EFKPPLHRYRQHNLVVHGWPNIIYEKQSWTALNAGVFLIRNCQWSMDLIDTWKSMGPVSP 252
Query: 307 VRDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFWAGLVDK 366
+ G + + + E+DDQ+ALI++L KE + K+Y+E +Y+L G+W G+
Sbjct: 253 DYKKWGPIQRSIFKDKLFPESDDQTALIYLLYKHKELYYPKIYLEAEYYLQGYWIGVFGD 312
Query: 367 YEEMMERH----------------------------------HPGLGDERWPFVTHFVGC 392
+ + ER+ G G R F+THF GC
Sbjct: 313 FANVTERYLEMEREDDTLRRRHAEKVSERYGAFREERFLKGEFGGRGSRRRAFITHFTGC 372
Query: 393 KPCGGYGD--YPRERCLGGMERAFNFADNQVLRLYGF 427
+PC G + Y + C M RA NFADNQV+R+YG+
Sbjct: 373 QPCSGDHNPSYDGDTCWNEMIRALNFADNQVMRVYGY 409
>AT2G22900.1 | chr2:9744359-9746193 REVERSE LENGTH=450
Length = 449
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 201/337 (59%), Gaps = 39/337 (11%)
Query: 127 TYTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLLKAT 186
TYT+ V W+ KRR+WL+ +P F + R ++VTGSQ APC + GDH LL+
Sbjct: 93 TYTIEKPVKNWDEKRRRWLNLHPSF---IPGAENRTVMVTGSQSAPCKNPIGDHLLLRFF 149
Query: 187 KNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHPEVEWVWWMDSDALFTDM 246
KNK+DYCRIHG +I +S A L ++ YWAKLP ++ M++HPE EW+WW+DSDALFTDM
Sbjct: 150 KNKVDYCRIHGHDIFYSNALLHPKMNSYWAKLPAVKAAMIAHPEAEWIWWVDSDALFTDM 209
Query: 247 AFELPLARYDTSNLVIHGYPELLFAKRSWIALNTGSFLLRNCQWSLELLDAWAPMGPKGR 306
F P RY NLV+HG+P +++ RSW ALN G FL+RNCQWS+EL+D W MGP
Sbjct: 210 DFTPPWRRYKEHNLVVHGWPGVIYNDRSWTALNAGVFLIRNCQWSMELIDTWTGMGPVSP 269
Query: 307 VRDEAGKVLTASLTGRPAFEADDQSALIHILLTQKERWMEKVYVEDKYFLHGFW------ 360
+ G++ + + E+DDQ+AL+++L +E + K+Y+E ++ G+W
Sbjct: 270 EYAKWGQIQRSIFKDKLFPESDDQTALLYLLYKHREVYYPKIYLEGDFYFEGYWLEIVPG 329
Query: 361 -AGLVDKYEEM------MERHHP---------------------GLGDERWPFVTHFVGC 392
+ + ++Y EM + R H G G +R PFVTHF GC
Sbjct: 330 LSNVTERYLEMEREDATLRRRHAEKVSERYAAFREERFLKGERGGKGSKRRPFVTHFTGC 389
Query: 393 KPCGGYGD--YPRERCLGGMERAFNFADNQVLRLYGF 427
+PC G + Y + C GM +A NFADNQV+R YGF
Sbjct: 390 QPCSGDHNKMYDGDTCWNGMIKAINFADNQVMRKYGF 426
>AT4G38310.1 | chr4:17948482-17948844 FORWARD LENGTH=121
Length = 120
Score = 97.1 bits (240), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/104 (43%), Positives = 67/104 (64%), Gaps = 4/104 (3%)
Query: 127 TYTLGPKVTRWNAKRRQWLSRNPGFPSRDARGKPRILLVTGSQPAPCDDAAGDHYLL-KA 185
+Y++ +T W+ KR +W +P F + RIL+VTGSQ +PC + GDH LL +
Sbjct: 17 SYSIEKSITNWDEKRHEWFKSHPSF---KPGSENRILMVTGSQSSPCKNPIGDHLLLLRC 73
Query: 186 TKNKIDYCRIHGIEIVHSMAHLDRELAGYWAKLPLLRRLMLSHP 229
KNK+DY RIHG +I +S + L ++ YWAKLP+++ ML+HP
Sbjct: 74 FKNKVDYARIHGHDIFYSNSLLHPKMNSYWAKLPVVKAAMLAHP 117
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,914,334
Number of extensions: 363711
Number of successful extensions: 648
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 634
Number of HSP's successfully gapped: 10
Length of query: 463
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 361
Effective length of database: 8,310,137
Effective search space: 2999959457
Effective search space used: 2999959457
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 113 (48.1 bits)