BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0138900 Os12g0138900|AK066890
(635 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74040.1 | chr1:27842258-27845566 FORWARD LENGTH=632 800 0.0
AT1G18500.1 | chr1:6369347-6372861 FORWARD LENGTH=632 789 0.0
AT5G23020.1 | chr5:7718203-7721634 FORWARD LENGTH=504 501 e-142
AT5G23010.1 | chr5:7703173-7706769 FORWARD LENGTH=507 491 e-139
>AT1G74040.1 | chr1:27842258-27845566 FORWARD LENGTH=632
Length = 631
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/542 (70%), Positives = 456/542 (84%), Gaps = 3/542 (0%)
Query: 76 RRPEYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVARQLARLGVDIIEAGFPA 135
RRP Y+PNRI DPNYVRIFDTTLRDGEQSPGAT+TS EKL +ARQLA+LGVDIIEAGFPA
Sbjct: 72 RRPNYIPNRISDPNYVRIFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPA 131
Query: 136 SSPDDLDAVRSIAIEVGNTPVGEDGHVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTFI 195
+S DD +AV++IA VGNT V E+G+VPVICGLSRCNK+DI+ AWEAV++A+RPRIHTFI
Sbjct: 132 ASKDDFEAVKTIAETVGNT-VDENGYVPVICGLSRCNKKDIETAWEAVKYAKRPRIHTFI 190
Query: 196 ATSEIHMQHKLRKTPEQVVAIAKEMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEVI 255
ATS+IH+++KL+K+ E+V+ IA+ MV +ARSLGC DVEFSPEDAGRS RE+LY IL EVI
Sbjct: 191 ATSDIHLKYKLKKSKEEVIEIARNMVRFARSLGCEDVEFSPEDAGRSEREYLYEILGEVI 250
Query: 256 KAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDXXXXXXXXXXXXX 315
KAGATTLNIPDTVG TLP EFG+LIADIKANTPGI+N IISTHCQND
Sbjct: 251 KAGATTLNIPDTVGITLPSEFGQLIADIKANTPGIQNVIISTHCQNDLGLSTANTLSGAH 310
Query: 316 XXXRQLEVTINGIGERAGNASLEEVVMAIKCRRE-LLGGLYTGINTQHITMSSKMVQEHS 374
RQ+EVTINGIGERAGNASLEEVVMAIKCR + +LGGL+TGI+T+HI M+SKMV+E++
Sbjct: 311 SGARQVEVTINGIGERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMVEEYT 370
Query: 375 GLHVQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSGR 434
G+ QPHKAIVGANAFAHESGIHQDGMLK+KGTYEI+SP++IGL R+N+ GIVLGKLSGR
Sbjct: 371 GMQTQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIMSPEEIGLERSNDAGIVLGKLSGR 430
Query: 435 HAVRSKLVELGYEITDKEFEDFFKRYKEVAEKKKRVTDEDIEALLSDEIFQPKVFWSLAD 494
HA++ +L ELGY + D + + F R+K VAE+KKRVTD D+ AL+SDE+FQP+ W L D
Sbjct: 431 HALKDRLNELGYVLDDGQLSNLFWRFKAVAEQKKRVTDADLIALVSDEVFQPEAVWKLLD 490
Query: 495 VQATCGTLGLSTATVKLIGPDGDEKIACAVGTGPVDAAYKAVDDIIQIPTVLREYSMTSV 554
+Q TCGTLGLST+TVKL DG E +AC+VGTGPVDAAYKAVD I++ P L EYSM +V
Sbjct: 491 MQITCGTLGLSTSTVKLADSDGKEHVACSVGTGPVDAAYKAVDLIVKEPATLLEYSMNAV 550
Query: 555 TEGIDAIATTRVVVTGDVS-DSKHALTGHSFNRAFSGSGAALDIVVSSVRAYLSALNKMS 613
TEGIDAIATTRV++ GD + S +A+TG S R FSG+GA +DIVVSSV+AY+ ALNKM
Sbjct: 551 TEGIDAIATTRVLIRGDNNYSSTNAVTGESVERTFSGTGAGMDIVVSSVKAYVGALNKML 610
Query: 614 SF 615
F
Sbjct: 611 GF 612
>AT1G18500.1 | chr1:6369347-6372861 FORWARD LENGTH=632
Length = 631
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/539 (69%), Positives = 450/539 (83%), Gaps = 3/539 (0%)
Query: 79 EYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVARQLARLGVDIIEAGFPASSP 138
EY+PNRI DPNYVR+FDTTLRDGEQSPGAT+TS EKL +ARQLA+LGVDIIEAGFPA+S
Sbjct: 77 EYIPNRISDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAGFPAASK 136
Query: 139 DDLDAVRSIAIEVGNTPVGEDGHVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTFIATS 198
DD +AV++IA VGNT V E+G+VPVICGLSRCNK+DI+ AW+AV++A+RPRIHTFIATS
Sbjct: 137 DDFEAVKTIAETVGNT-VDENGYVPVICGLSRCNKKDIERAWDAVKYAKRPRIHTFIATS 195
Query: 199 EIHMQHKLRKTPEQVVAIAKEMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEVIKAG 258
+IH+++KL+KT +V+ IA+ MV +ARSLGC DVEFSPEDAGRS RE+LY IL EVIKAG
Sbjct: 196 DIHLEYKLKKTKAEVIEIARSMVRFARSLGCEDVEFSPEDAGRSEREYLYEILGEVIKAG 255
Query: 259 ATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDXXXXXXXXXXXXXXXX 318
ATTLNIPDTVG TLP EFG+LI D+KANTPGIEN +ISTHCQND
Sbjct: 256 ATTLNIPDTVGITLPSEFGQLITDLKANTPGIENVVISTHCQNDLGLSTANTLSGAHAGA 315
Query: 319 RQLEVTINGIGERAGNASLEEVVMAIKCRRE-LLGGLYTGINTQHITMSSKMVQEHSGLH 377
RQ+EVTINGIGERAGNASLEEVVMAIKCR + +LGGL+TGI+T+HI M+SKMV+E++G+
Sbjct: 316 RQMEVTINGIGERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMVEEYTGMQ 375
Query: 378 VQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSGRHAV 437
QPHKAIVGANAFAHESGIHQDGMLK+KGTYEII P++IGL R+N+ GIVLGKLSGRHA+
Sbjct: 376 TQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIICPEEIGLERSNDAGIVLGKLSGRHAL 435
Query: 438 RSKLVELGYEITDKEFEDFFKRYKEVAEKKKRVTDEDIEALLSDEIFQPKVFWSLADVQA 497
+ +L ELGY++ D++ F R+K VAE+KKRVTD DI AL+SDE+FQP+ W L D+Q
Sbjct: 436 KDRLTELGYQLDDEQLSTIFWRFKTVAEQKKRVTDADIIALVSDEVFQPEAVWKLLDIQI 495
Query: 498 TCGTLGLSTATVKLIGPDGDEKIACAVGTGPVDAAYKAVDDIIQIPTVLREYSMTSVTEG 557
TCGTLGLSTATVKL DG E +AC++GTGPVD+AYKAVD I++ P L EYSM +VTEG
Sbjct: 496 TCGTLGLSTATVKLADADGKEHVACSIGTGPVDSAYKAVDLIVKEPATLLEYSMNAVTEG 555
Query: 558 IDAIATTRVVVTG-DVSDSKHALTGHSFNRAFSGSGAALDIVVSSVRAYLSALNKMSSF 615
IDAIATTRV++ G + S +A+TG R FSG+GA +DIVVSSV+AY+ ALNKM F
Sbjct: 556 IDAIATTRVLIRGSNKYSSTNAITGEEVQRTFSGTGAGMDIVVSSVKAYVGALNKMMDF 614
>AT5G23020.1 | chr5:7718203-7721634 FORWARD LENGTH=504
Length = 503
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 229/405 (56%), Positives = 308/405 (76%), Gaps = 1/405 (0%)
Query: 76 RRPEYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVARQLARLGVDIIEAGFPA 135
RRPEY+PN++ NYVR+ DTTLRDGEQSPGA +T +KL +ARQLA+L VDI+E GFP
Sbjct: 70 RRPEYIPNKLPHKNYVRVLDTTLRDGEQSPGAALTPPQKLEIARQLAKLRVDIMEVGFPV 129
Query: 136 SSPDDLDAVRSIAIEVGNTPVGEDGHVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTFI 195
SS ++ +A+++IA VGN E G+VPVICG++RC KRDI+A WEA+++A+RPR+ F
Sbjct: 130 SSEEEFEAIKTIAKTVGNEVDEETGYVPVICGIARCKKRDIEATWEALKYAKRPRVMLFT 189
Query: 196 ATSEIHMQHKLRKTPEQVVAIAKEMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEVI 255
+TSEIHM++KL+KT E+V+ +A V YA+SLG D++F ED GR+ ++F+ IL E I
Sbjct: 190 STSEIHMKYKLKKTKEEVIEMAVNSVKYAKSLGFKDIQFGCEDGGRTEKDFICKILGESI 249
Query: 256 KAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDXXXXXXXXXXXXX 315
KAGATT+ DTVG +P EFG+L+A + NTPG ++ + + HC ND
Sbjct: 250 KAGATTVGFADTVGINMPQEFGELVAYVIENTPGADDIVFAIHCHNDLGVATANTISGIC 309
Query: 316 XXXRQLEVTINGIGERAGNASLEEVVMAIKCRRE-LLGGLYTGINTQHITMSSKMVQEHS 374
RQ+EVTINGIGER+GNA LEEVVMA+KCR E L+ G+YT I+++ I +SKMVQEH+
Sbjct: 310 AGARQVEVTINGIGERSGNAPLEEVVMALKCRGESLMDGVYTKIDSRQIMATSKMVQEHT 369
Query: 375 GLHVQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSGR 434
G++VQPHK IVG N F HESGIHQDG+LK + TYEI+SP+D+G+ ++ GIVLGKLSGR
Sbjct: 370 GMYVQPHKPIVGDNCFVHESGIHQDGILKNRSTYEILSPEDVGIVKSENSGIVLGKLSGR 429
Query: 435 HAVRSKLVELGYEITDKEFEDFFKRYKEVAEKKKRVTDEDIEALL 479
HAV+ +L ELGYEI+D++F D F RY+E+ + KKR+TD D++AL+
Sbjct: 430 HAVKDRLKELGYEISDEKFNDIFSRYRELTKDKKRITDADLKALV 474
>AT5G23010.1 | chr5:7703173-7706769 FORWARD LENGTH=507
Length = 506
Score = 491 bits (1264), Expect = e-139, Method: Compositional matrix adjust.
Identities = 237/477 (49%), Positives = 334/477 (70%), Gaps = 11/477 (2%)
Query: 19 PTSTPRPRAQTLSPFRAAAPRFSHGLXXXXXXXNPSASRRCYHRAFARPVRASM-AQP-- 75
PT+ +++ PF+++ H L NP+ C +S +P
Sbjct: 13 PTTGSTVVGRSVLPFQSSL----HSLRLTHSYKNPALFISCCSSVSKNAATSSTDLKPVV 68
Query: 76 -RRPEYVPNRIDDPNYVRIFDTTLRDGEQSPGATMTSAEKLVVARQLARLGVDIIEAGFP 134
R PEY+PN++ D NYVR+FDTTLRDGEQSPG ++T +KL +ARQLA+L VDI+E GFP
Sbjct: 69 ERWPEYIPNKLPDGNYVRVFDTTLRDGEQSPGGSLTPPQKLEIARQLAKLRVDIMEVGFP 128
Query: 135 ASSPDDLDAVRSIAIEVGNTPVGEDGHVPVICGLSRCNKRDIDAAWEAVRHARRPRIHTF 194
SS ++L+ +++IA VGN E G+VPVIC ++RC RDI+A WEA+++A+RPRI F
Sbjct: 129 GSSEEELETIKTIAKTVGNEVDEETGYVPVICAIARCKHRDIEATWEALKYAKRPRILVF 188
Query: 195 IATSEIHMQHKLRKTPEQVVAIAKEMVAYARSLGCPDVEFSPEDAGRSNREFLYHILEEV 254
+TS+IHM++KL+KT E+V+ +A + +A+SLG D++F ED GRS+++FL IL E
Sbjct: 189 TSTSDIHMKYKLKKTQEEVIEMAVSSIRFAKSLGFNDIQFGCEDGGRSDKDFLCKILGEA 248
Query: 255 IKAGATTLNIPDTVGYTLPYEFGKLIADIKANTPGIENAIISTHCQNDXXXXXXXXXXXX 314
IKAG T + I DTVG +P+E+G+L+ +KANTPGI++ +++ HC ND
Sbjct: 249 IKAGVTVVTIGDTVGINMPHEYGELVTYLKANTPGIDDVVVAVHCHNDLGLATANSIAGI 308
Query: 315 XXXXRQLEVTINGIGERAGNASLEEVVMAIKCR-RELLGGLYTGINTQHITMSSKMVQEH 373
RQ+EVTINGIGER+GNASLEEVVMA+KCR ++ G+YT I+T+ I +SKMVQE+
Sbjct: 309 RAGARQVEVTINGIGERSGNASLEEVVMALKCRGAYVINGVYTKIDTRQIMATSKMVQEY 368
Query: 374 SGLHVQPHKAIVGANAFAHESGIHQDGMLKYKGTYEIISPDDIGLTRANEFGIVLGKLSG 433
+GL+VQ HK IVGAN F HESGIHQDG+LK + TYEI+SP+DIG+ ++ G+VLGKLSG
Sbjct: 369 TGLYVQAHKPIVGANCFVHESGIHQDGILKNRSTYEILSPEDIGIVKSQNSGLVLGKLSG 428
Query: 434 RHAVRSKLVELGYEITDKEFEDFFKRYKEVAEKKKRVTDEDIEALL--SDEIFQPKV 488
RHAV+ +L ELGYE+ D++ F ++++ + KKR+TD D++AL+ SDEI K+
Sbjct: 429 RHAVKDRLKELGYELDDEKLNAVFSLFRDLTKNKKRITDADLKALVTSSDEISLEKL 485
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.317 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,211,486
Number of extensions: 501129
Number of successful extensions: 1341
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1327
Number of HSP's successfully gapped: 4
Length of query: 635
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 530
Effective length of database: 8,227,889
Effective search space: 4360781170
Effective search space used: 4360781170
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)