BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0133800 Os12g0133800|AK059577
(250 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G57090.1 | chr5:23100765-23104456 FORWARD LENGTH=648 304 3e-83
AT2G01420.2 | chr2:180478-183199 REVERSE LENGTH=617 300 5e-82
AT1G73590.1 | chr1:27659772-27662876 FORWARD LENGTH=623 298 2e-81
AT1G23080.1 | chr1:8180768-8183406 REVERSE LENGTH=620 293 7e-80
AT1G70940.1 | chr1:26743170-26745871 FORWARD LENGTH=641 291 3e-79
AT1G77110.1 | chr1:28970855-28974408 FORWARD LENGTH=571 238 2e-63
AT5G15100.1 | chr5:4892159-4893937 REVERSE LENGTH=368 204 5e-53
AT5G16530.1 | chr5:5400735-5402626 FORWARD LENGTH=352 181 3e-46
>AT5G57090.1 | chr5:23100765-23104456 FORWARD LENGTH=648
Length = 647
Score = 304 bits (778), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/269 (62%), Positives = 191/269 (71%), Gaps = 25/269 (9%)
Query: 1 MFVWSSSASPVSE--------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDEYSFGNKN 52
MFVWSSSASPVSE R + S G K
Sbjct: 385 MFVWSSSASPVSEANAKNAMTRGSSTDVSTDPKVSIPPHDNLATKAMQNLIENMSPGRKG 444
Query: 53 ----EKDG------PTLSKLGSNSTAQLRPKDDGEG-RAAAMPPASVMTRLILIMVWRKL 101
++DG P + K GS+ +D G G R MPPASVMTRLILIMVWRKL
Sbjct: 445 HVEMDQDGNNGGKSPYMGKKGSDV------EDGGPGPRKQQMPPASVMTRLILIMVWRKL 498
Query: 102 IRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRII 161
IRNPNTYSSL G+ WSLVS++W I+MP I++ SISILSDAGLGMAMFSLGLFMALQP+II
Sbjct: 499 IRNPNTYSSLFGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLFMALQPKII 558
Query: 162 ACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNV 221
ACG S+A +AMAVRFL GPAV+AA SIA+G+RG LLHIAIVQAALPQGIVPFVFAKEYNV
Sbjct: 559 ACGKSVAGFAMAVRFLTGPAVIAATSIAIGIRGDLLHIAIVQAALPQGIVPFVFAKEYNV 618
Query: 222 HPNILSTAVIFGMLIALPITLVYYILLGL 250
HP+ILSTAVIFGML+ALP+T++YY+LLGL
Sbjct: 619 HPDILSTAVIFGMLVALPVTVLYYVLLGL 647
>AT2G01420.2 | chr2:180478-183199 REVERSE LENGTH=617
Length = 616
Score = 300 bits (768), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 154/200 (77%), Positives = 171/200 (85%), Gaps = 2/200 (1%)
Query: 53 EKDGPTLSKLGSNSTAQLRP--KDDGEGRAAAMPPASVMTRLILIMVWRKLIRNPNTYSS 110
EK L+K+GSNSTA+L D G MPP SVMTRLILIMVWRKLIRNPNTYSS
Sbjct: 417 EKATAGLNKMGSNSTAELEAAGGDGGGNNGTHMPPTSVMTRLILIMVWRKLIRNPNTYSS 476
Query: 111 LLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLASY 170
L+G+IW+LV+YRW + MP I+ +SISILSDAGLGMAMFSLGLFMALQP+IIACGNS+A++
Sbjct: 477 LIGLIWALVAYRWHVAMPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATF 536
Query: 171 AMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTAV 230
AMAVRF+ GPA+MA A IA+GL G LL IAIVQAALPQGIVPFVFAKEYNVHP ILST V
Sbjct: 537 AMAVRFITGPAIMAVAGIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILSTGV 596
Query: 231 IFGMLIALPITLVYYILLGL 250
IFGMLIALPITLVYYILLGL
Sbjct: 597 IFGMLIALPITLVYYILLGL 616
>AT1G73590.1 | chr1:27659772-27662876 FORWARD LENGTH=623
Length = 622
Score = 298 bits (763), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 165/261 (63%), Positives = 190/261 (72%), Gaps = 18/261 (6%)
Query: 1 MFVWSSSASPVSE-----------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDEYSFG 49
MFVWSSSASPVS+ +E+SFG
Sbjct: 369 MFVWSSSASPVSDVFGGGGGNHHADYSTATNDHQKDVKISVPQGNSNDNQYVEREEFSFG 428
Query: 50 NKNEKDGPTLSKLGSNSTAQLRPKDDGEGRAAAMPPASVMTRLILIMVWRKLIRNPNTYS 109
NK++ D L+ G N+ + + +A MPP SVMTRLILIMVWRKLIRNPN+YS
Sbjct: 429 NKDD-DSKVLATDGGNNIS------NKTTQAKVMPPTSVMTRLILIMVWRKLIRNPNSYS 481
Query: 110 SLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSLAS 169
SL G+ WSL+S++W IEMPA+IA+SISILSDAGLGMAMFSLGLFMAL PRIIACGN A+
Sbjct: 482 SLFGITWSLISFKWNIEMPALIAKSISILSDAGLGMAMFSLGLFMALNPRIIACGNRRAA 541
Query: 170 YAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPNILSTA 229
+A A+RF+VGPAVM AS AVGLRGVLLH+AI+QAALPQGIVPFVFAKEYNVHP+ILSTA
Sbjct: 542 FAAAMRFVVGPAVMLVASYAVGLRGVLLHVAIIQAALPQGIVPFVFAKEYNVHPDILSTA 601
Query: 230 VIFGMLIALPITLVYYILLGL 250
VIFGMLIALPITL+YYILLGL
Sbjct: 602 VIFGMLIALPITLLYYILLGL 622
>AT1G23080.1 | chr1:8180768-8183406 REVERSE LENGTH=620
Length = 619
Score = 293 bits (749), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 167/271 (61%), Positives = 189/271 (69%), Gaps = 21/271 (7%)
Query: 1 MFVWSSSASPVSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXYDEY------------SF 48
MFVW S+ SPVS+R D +
Sbjct: 349 MFVWGSNGSPVSDRAGLQVDNGANEQVGKSDQGGAKEIRMLISDHTQNGENKAGPMNGDY 408
Query: 49 GNKNE----KDGPT-LSKLGSNSTAQLRPKDDGEGRAAA----MPPASVMTRLILIMVWR 99
G + E K+ P L KL NSTA+L PK+ E MPPASVMTRLILIMVWR
Sbjct: 409 GGEEESERVKEVPNGLHKLRCNSTAELNPKEAIETGETVPVKHMPPASVMTRLILIMVWR 468
Query: 100 KLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLFMALQPR 159
KLIRNPNTYSSL+G+IW+LV++RW + MP II +SISILSDAGLGMAMFSLGLFMALQP+
Sbjct: 469 KLIRNPNTYSSLIGLIWALVAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPK 528
Query: 160 IIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEY 219
+IACGNS A++AMAVRF GPAVMA A++A+GLRG LL +AIVQAALPQGIVPFVFAKEY
Sbjct: 529 LIACGNSTATFAMAVRFFTGPAVMAVAAMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEY 588
Query: 220 NVHPNILSTAVIFGMLIALPITLVYYILLGL 250
NVHP ILST VIFGMLIALPITLVYYILLGL
Sbjct: 589 NVHPAILSTGVIFGMLIALPITLVYYILLGL 619
>AT1G70940.1 | chr1:26743170-26745871 FORWARD LENGTH=641
Length = 640
Score = 291 bits (744), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 180/217 (82%), Gaps = 10/217 (4%)
Query: 44 DEYSFGNKNE-----KDGPT-LSKLGSNSTAQLRPKDDGEGRAAA----MPPASVMTRLI 93
++SF K E KD L+KL NSTA L+ K G A+ MPPASVMTRLI
Sbjct: 424 QQFSFAGKEEEAERPKDAENGLNKLAPNSTAALQSKTGLGGAEASQRKNMPPASVMTRLI 483
Query: 94 LIMVWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGLF 153
LIMVWRKLIRNPNTYSSL+G+IW+LV++RW + MP II +SISILSDAGLGMAMFSLGLF
Sbjct: 484 LIMVWRKLIRNPNTYSSLIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGLF 543
Query: 154 MALQPRIIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPF 213
MALQP++IACGNS+A++AMAVRFL GPAVMA A+IA+GLRG LL +AIVQAALPQGIVPF
Sbjct: 544 MALQPKLIACGNSVATFAMAVRFLTGPAVMAVAAIAIGLRGDLLRVAIVQAALPQGIVPF 603
Query: 214 VFAKEYNVHPNILSTAVIFGMLIALPITLVYYILLGL 250
VFAKEYNVHP ILST VIFGMLIALPITLVYYILLGL
Sbjct: 604 VFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 640
>AT1G77110.1 | chr1:28970855-28974408 FORWARD LENGTH=571
Length = 570
Score = 238 bits (607), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/168 (68%), Positives = 140/168 (83%)
Query: 83 MPPASVMTRLILIMVWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAG 142
MP A VM RLIL +V RKL RNPNTYSSLLG++WSL+S++W I MP I+ SI I+SDAG
Sbjct: 403 MPSAIVMMRLILTVVGRKLSRNPNTYSSLLGLVWSLISFKWNIPMPNIVDFSIKIISDAG 462
Query: 143 LGMAMFSLGLFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIV 202
LGMAMFSLGLFMALQP++I CG A+ M +RF+ GP MA AS+ VGLRG LH AIV
Sbjct: 463 LGMAMFSLGLFMALQPKMIPCGAKKATMGMLIRFISGPLFMAGASLLVGLRGSRLHAAIV 522
Query: 203 QAALPQGIVPFVFAKEYNVHPNILSTAVIFGMLIALPITLVYYILLGL 250
QAALPQGIVPFVFA+EYN+HP++LST VIFGM+++LP+T++YY+LLGL
Sbjct: 523 QAALPQGIVPFVFAREYNLHPDLLSTLVIFGMIVSLPVTILYYVLLGL 570
>AT5G15100.1 | chr5:4892159-4893937 REVERSE LENGTH=368
Length = 367
Score = 204 bits (518), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/164 (60%), Positives = 126/164 (76%)
Query: 87 SVMTRLILIMVWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMA 146
SV T IL+ WRKLI NPNTY++L+G+IW+ + +R G +P +I +SI +LSD GLGMA
Sbjct: 204 SVGTMKILLKAWRKLIINPNTYATLIGIIWATLHFRLGWNLPEMIDKSIHLLSDGGLGMA 263
Query: 147 MFSLGLFMALQPRIIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAAL 206
MFSLGLFMA Q IIACG +A M ++F++GPA+M A++ + L+ L +AI+QAAL
Sbjct: 264 MFSLGLFMASQSSIIACGTKMAIITMLLKFVLGPALMIASAYCIRLKSTLFKVAILQAAL 323
Query: 207 PQGIVPFVFAKEYNVHPNILSTAVIFGMLIALPITLVYYILLGL 250
PQG+VPFVFAKEYN+HP I+ST VIFGMLIALP TL YY LL L
Sbjct: 324 PQGVVPFVFAKEYNLHPEIISTGVIFGMLIALPTTLAYYFLLDL 367
>AT5G16530.1 | chr5:5400735-5402626 FORWARD LENGTH=352
Length = 351
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 113/153 (73%)
Query: 93 ILIMVWRKLIRNPNTYSSLLGVIWSLVSYRWGIEMPAIIARSISILSDAGLGMAMFSLGL 152
++ +VW KL NPN YS +LG+ W+ +S RW +E+P I+ SI I+S AG G AMF++G+
Sbjct: 192 VMSLVWLKLATNPNCYSCILGIAWAFISNRWHLELPGILEGSILIMSKAGTGTAMFNMGI 251
Query: 153 FMALQPRIIACGNSLASYAMAVRFLVGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVP 212
FMALQ ++I CG SL M ++F+ GPA MA SI +GL G +L +AI+QAALPQ I
Sbjct: 252 FMALQEKLIVCGTSLTVMGMVLKFIAGPAAMAIGSIVLGLHGDVLRVAIIQAALPQSITS 311
Query: 213 FVFAKEYNVHPNILSTAVIFGMLIALPITLVYY 245
F+FAKEY +H ++LSTAVIFGML++LP+ + YY
Sbjct: 312 FIFAKEYGLHADVLSTAVIFGMLVSLPVLVAYY 344
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,449,825
Number of extensions: 152533
Number of successful extensions: 494
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 492
Number of HSP's successfully gapped: 8
Length of query: 250
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 154
Effective length of database: 8,474,633
Effective search space: 1305093482
Effective search space used: 1305093482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 110 (47.0 bits)