BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0120500 Os12g0120500|AK103389
(228 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G15810.1 | chr3:5348054-5349178 REVERSE LENGTH=221 92 3e-19
AT1G80120.1 | chr1:30139198-30139986 FORWARD LENGTH=211 92 3e-19
AT2G38640.1 | chr2:16157725-16158474 REVERSE LENGTH=197 84 4e-17
AT5G41590.1 | chr5:16632221-16633896 REVERSE LENGTH=222 82 3e-16
AT5G01750.2 | chr5:290034-291109 FORWARD LENGTH=218 77 6e-15
AT3G11740.1 | chr3:3712427-3713389 FORWARD LENGTH=195 74 6e-14
AT1G33840.1 | chr1:12283862-12285306 REVERSE LENGTH=231 65 4e-11
AT5G20640.1 | chr5:6984379-6985205 FORWARD LENGTH=216 62 2e-10
AT1G63410.1 | chr1:23510075-23511997 REVERSE LENGTH=209 61 5e-10
AT1G53870.1 | chr1:20112295-20113057 FORWARD LENGTH=218 60 1e-09
AT3G16900.1 | chr3:5772106-5772849 FORWARD LENGTH=186 58 3e-09
AT2G14560.1 | chr2:6214150-6215170 FORWARD LENGTH=208 58 5e-09
AT1G53900.1 | chr1:20127634-20130834 FORWARD LENGTH=581 55 4e-08
AT1G53880.1 | chr1:20115069-20118269 FORWARD LENGTH=581 55 4e-08
AT3G14260.1 | chr3:4747986-4748779 REVERSE LENGTH=231 54 1e-07
>AT3G15810.1 | chr3:5348054-5349178 REVERSE LENGTH=221
Length = 220
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 33 RSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLALTPQIISMH 92
++S+ + G DGF+ YD G + FRVD+Y + + +++LMD G LL + + ++H
Sbjct: 37 KTSLFYTG-DGFAAYDCRGDIIFRVDSYGPDTRD-NDEIVLMDATGKCLLTVKRKRPTLH 94
Query: 93 DQWNCYRASEEGQGKRARSQQ-LFSMRKCSVM-QSSHEAEVHMSGCTHASSDRTGHVPAF 150
+W + G+R+ Q+ +FS+R+ S++ + + E EV+ D TG +
Sbjct: 95 QRWEGF------LGERSEGQKPIFSVRRSSIIGRCTMEVEVY---------DGTGE--EY 137
Query: 151 SIEGSFKRRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIMAFV 210
I+G F +RSC I ++ VA I RK AS ++ L DVF+LE++P D A M V
Sbjct: 138 IIDGDFSQRSCLIYDTKKCTVAEIKRKVD--ASTNVMLGRDVFTLEIKPGFDGAFAMGLV 195
Query: 211 IVLDRI 216
+VLD+I
Sbjct: 196 VVLDQI 201
>AT1G80120.1 | chr1:30139198-30139986 FORWARD LENGTH=211
Length = 210
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 101/187 (54%), Gaps = 20/187 (10%)
Query: 32 KRSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLALTPQIISM 91
+++S+ F G DGF+VYD GSL FRVD+Y + +++LMD HG LL L + S+
Sbjct: 22 RKTSLFFAG-DGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPSL 80
Query: 92 HDQWNCYRASEEGQGKRARSQQ-LFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGHVPAF 150
+W Y G+R+ Q+ +F +R+ S++ + V + G S +
Sbjct: 81 RRRWEGY------LGERSDGQKPIFGVRRSSII-GRNSVTVEVYGDYQCSE--------Y 125
Query: 151 SIEGSFKRRSCKIRNSGG-EEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIMAF 209
IEGSF R+C + + +VA I RK AS ++ L +DVFSL V+P D A M
Sbjct: 126 LIEGSFGARNCTVVEAETRRKVAEIRRKV--DASTNVMLGKDVFSLNVKPGFDGAFAMGL 183
Query: 210 VIVLDRI 216
V+VLD+I
Sbjct: 184 VLVLDQI 190
>AT2G38640.1 | chr2:16157725-16158474 REVERSE LENGTH=197
Length = 196
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 28/218 (12%)
Query: 1 MSRIHPSYQRQDXXXXXXXXXXXXXXVYTVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNY 60
M+++HP + V TVWK+S + DGF+VY+ G L FRVDNY
Sbjct: 1 MTKVHPKFP---STCEESLCDSKAAVVLTVWKKSLLF--NCDGFTVYNANGELVFRVDNY 55
Query: 61 SRRRKLFSGDLLLMDGHGSPLLALTPQIISMHDQWNCYRASEEGQGKRARSQQLFSMRKC 120
+ +++LMD G PLL++ + +S+ D W Y +G+ +R +F+ RK
Sbjct: 56 MNCPR---DNIVLMDASGFPLLSIRRKKLSLGDCWMVY----DGETER---DPIFTARKN 105
Query: 121 SVMQSSHEAEVHMSGCTHASSDRTGHVPAFSIEGSFKRRSCKIRNS--GGEEVARITRKK 178
+ S+ ++ +S + IEGS+ +RSCKI + ++ A I RK+
Sbjct: 106 VSIISNRKSLAWVSA---------KKTVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKE 156
Query: 179 AGAASLSLTLAEDVFSLEVQPNVDCAMIMAFVIVLDRI 216
++ +DV+ L V+ ++ + MA I+LD++
Sbjct: 157 TVIGGVA--FGKDVYKLIVESEMEPRVAMALTIILDQM 192
>AT5G41590.1 | chr5:16632221-16633896 REVERSE LENGTH=222
Length = 221
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 14/191 (7%)
Query: 29 TVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLAL-TPQ 87
TVW++S + +GF+V D G L +RVDNY+R R +L+LMD G+ LL + +
Sbjct: 40 TVWRKSLL--VSCEGFTVIDSNGDLIYRVDNYARTR---PEELILMDKDGNSLLLMHRTK 94
Query: 88 IISMHDQWNCYRASE-EGQGKRARSQQLFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGH 146
I++ D W Y A++ +G+ K + + MRK M ++ S D+
Sbjct: 95 KITLVDSWGIYEANDTKGETKIPKCPTWY-MRKNLKMNILSTKSDILAYVYSGSFDKKN- 152
Query: 147 VPAFSIEGSFKRRSCKIRNSG-GEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAM 205
++ I+GS++ +SCKI + + V I RK+ + DVF L V P D +
Sbjct: 153 --SYIIKGSYRCKSCKIVHVPLNKTVVEIKRKEVRTKGVR--FGSDVFDLVVNPGFDTGL 208
Query: 206 IMAFVIVLDRI 216
MA V++LD++
Sbjct: 209 AMALVLLLDQM 219
>AT5G01750.2 | chr5:290034-291109 FORWARD LENGTH=218
Length = 217
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 21/179 (11%)
Query: 41 TDG-FSVYDDAGSLAFRVDNYSRRRKLFS--GDLLLMDGHGSPLLALTPQIISMHDQWNC 97
TDG F + D G+L F+V + +F +L+DG G+P++ L +++SMHD+W
Sbjct: 50 TDGNFVITDVNGNLLFKV-----KEPVFGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQV 104
Query: 98 YRASEEGQGKRARSQQLFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGHVPAFSIEGSFK 157
+R G + L+++++ S++Q + +V + H ++ F ++GS+
Sbjct: 105 FRG-----GSTDQRDLLYTVKRSSMLQLKTKLDVFLG---HNKDEKRCD---FRVKGSWL 153
Query: 158 RRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIMAFVIVLDRI 216
RSC + GE A + + S+ L +D FS+ V PNVD A I + V++LD +
Sbjct: 154 ERSCVV--YAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDV 210
>AT3G11740.1 | chr3:3712427-3713389 FORWARD LENGTH=195
Length = 194
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 93/180 (51%), Gaps = 22/180 (12%)
Query: 41 TDG-FSVYDDAGSLAFRVDNYSRRRKLFS--GDLLLMDGHGSPLLALTPQIISMHDQWNC 97
TDG F+V D G+L F+V + LFS +L+D + +P+L L +S+HD+W
Sbjct: 26 TDGNFAVTDVNGNLLFKV-----KEPLFSISDKRILLDAYDTPILTLRENKVSLHDRWLV 80
Query: 98 YRASEEGQGKRARSQQLFSMRKCSVMQ-SSHEAEVHMSGCTHASSDRTGHVPAFSIEGSF 156
YR Q S L+++++ S++Q + ++ + + ++ + F ++GS+
Sbjct: 81 YRGKSTDQ-----SDLLYTLKRSSMIQIMKPKLDIFL------AHNKEMKICDFHVKGSW 129
Query: 157 KRRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIMAFVIVLDRI 216
RSC + + + KK A S+ + + FS+ V PNVD A I++ +++LD I
Sbjct: 130 IDRSCVVYAGKSDAIVAQMHKKHTAQ--SILIGKSNFSVTVYPNVDFAFIVSLIVILDDI 187
>AT1G33840.1 | chr1:12283862-12285306 REVERSE LENGTH=231
Length = 230
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 21/176 (11%)
Query: 41 TDG-FSVYDDAGSLAFRVDN--YSRRRKLFSGDLLLMDGHGSPLLALTPQIISMHDQWNC 97
TDG F + + G+L F+V + +S K +LMDG G+ +L L +I++MHD+W
Sbjct: 50 TDGNFVITNAEGNLLFKVKDPFFSLHEKR-----ILMDGFGTKVLTLKGKIMTMHDRWLV 104
Query: 98 YRASEEGQGKRARSQQLFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGHVPAFSIEGSFK 157
+R G L+++++ +++Q + + +V ++ + +EG +
Sbjct: 105 FRG-----GSTEEVDLLYTVKRSNMVQITTKLDVFLADNIEQKK------CDYRLEGVWL 153
Query: 158 RRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIMAFVIVL 213
SC + + + R+K S+ +D F L V PNVD A I + +++L
Sbjct: 154 ETSCFVYAGDSDIILAQMREKKTMQ--SVLFGKDNFCLTVNPNVDYAFIASLIVIL 207
>AT5G20640.1 | chr5:6984379-6985205 FORWARD LENGTH=216
Length = 215
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 27 VYTVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLAL-- 84
V V +R M G GF V + + FRVD G LLL +G G+ LL +
Sbjct: 24 VLVVRRRPPMVNGG--GFVVSNSKQVVVFRVDGCGVLGT--KGKLLLRNGDGNDLLLIRK 79
Query: 85 ---TPQIISM-HDQWNCYRASEEGQGKRARSQQLFSMRK----CSVMQSSHEAEVHMSGC 136
Q ++M H++W + EG + +F+++ C V SS + VH
Sbjct: 80 MGGIVQALNMVHNKWEGFGYDNEGT-----ERLVFTLKDPKDSCLVQNSSIKILVH-GKP 133
Query: 137 THASSDRTGHVPAFSIEGSFKRRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLE 196
SS R +V I+GSF R+C I +S G+ +A++ +K + +D++ +
Sbjct: 134 PKISSTRNNYV---EIKGSFAERACNIMDSDGKAIAKVRIEKEMEEMVG--NKKDLYHVI 188
Query: 197 VQPNVDCAMIMAFVIVLDRI 216
V+PNVD + I+ + +LD I
Sbjct: 189 VKPNVDQSFIVGLIAILDYI 208
>AT1G63410.1 | chr1:23510075-23511997 REVERSE LENGTH=209
Length = 208
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 93/185 (50%), Gaps = 23/185 (12%)
Query: 28 YTVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLALTPQ 87
+TVW +S + +Q T+G +VY+ G + +RV+NY + S ++ +MD HG+ L + +
Sbjct: 22 FTVWMKS-LVYQ-TNGLTVYNSNGEITYRVENYDK----CSNEVHIMDLHGNILFTIRKK 75
Query: 88 IISMHDQWNCYRASEEGQGKRARSQQLFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGHV 147
+ + W YR G ++++ + C+ ++ S + D T V
Sbjct: 76 KLWLFGSWYVYREC----GSFTSTEEV---KPCARIKRSS-----IRDGDWEVRDETNEV 123
Query: 148 PAFSIEGSFKRRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIM 207
F I + + +I + G +A++ K++ S +TL EDV +LEV+P VD ++++
Sbjct: 124 --FWILRFDPKFAFQIIDIHGNIIAQVKPKQS---SNGITLGEDVLTLEVKPRVDHSLVV 178
Query: 208 AFVIV 212
V +
Sbjct: 179 TLVTI 183
>AT1G53870.1 | chr1:20112295-20113057 FORWARD LENGTH=218
Length = 217
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 19/184 (10%)
Query: 28 YTVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLALTPQ 87
+T+W +S + + G +V+D G+L +RVDNY + +S ++ MD +G L L +
Sbjct: 44 FTIWMKSLVF--NSKGCTVFDSKGNLIYRVDNYDSKS--WSNEVYFMDLNGKILFTLRQK 99
Query: 88 IISMHDQWNCYRASEEGQGKRARSQQLFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGHV 147
+ W Y ++ G R R +++F K +SS +V M G D+
Sbjct: 100 KLGFFKSWEGYNST----GTRFRLRKIF---KILPRESSSSYKVVM-GSRIVDGDQQSCY 151
Query: 148 PAFSIEGSFKRRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIM 207
+ F I++ G +A + K + + L L +DV ++ V+P +D ++IM
Sbjct: 152 KIVNRGSVF-----AIKDGSGRLMAEVKNKLSDISGLD--LGDDVLTMMVEPQLDHSLIM 204
Query: 208 AFVI 211
VI
Sbjct: 205 GIVI 208
>AT3G16900.1 | chr3:5772106-5772849 FORWARD LENGTH=186
Length = 185
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 34/178 (19%)
Query: 43 GFSVYDDAGSLAFRVDNYSRRRKLFS--GDLLLMDGHGSPLLALTPQIISMHDQWNCYRA 100
G +V D G+ F+V + LF +L+D + SP++ + ++ S HD+W YR
Sbjct: 32 GDTVKDATGNKVFKV-----KTPLFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRG 86
Query: 101 SEEGQGKRARSQQLFSMRKCSVMQSSHEAEVHM--SGCTHASSDRTGHVPAFSIEGSFKR 158
S+ ++F++++ S +Q EV + + +S D F+I+G F +
Sbjct: 87 SD-------LDDKIFTVKRSSTVQLKTRVEVFLKHNQTRESSCD-------FTIKGRFMK 132
Query: 159 RSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIMAFVIVLDRI 216
R+C I + ++ I + G L T + PNVD A I+ + + D I
Sbjct: 133 RACTIYVADSTKI--IAQVYEGHERLVAT---------IYPNVDYAFIVTLIFIFDLI 179
>AT2G14560.1 | chr2:6214150-6215170 FORWARD LENGTH=208
Length = 207
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 21/179 (11%)
Query: 41 TDG-FSVYDDAGSLAFRVDNYSRRRKLFS--GDLLLMDGHGSPLLALTPQIISMHDQWNC 97
TDG F + G L F+V + LFS G +L+D G+ +L L ++++MHD+W
Sbjct: 30 TDGNFVITSADGKLLFKV-----KDPLFSLHGKRILLDCSGAKVLTLRGKMMTMHDRWQV 84
Query: 98 YRASEEGQGKRARSQQLFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGHVPAFSIEGSFK 157
+R +G L+++++ S++Q + + EV + +++ + F ++G++
Sbjct: 85 FRGGSTEEG-----ALLYTVKRSSMIQLAPKLEVFL------ANNVEEKICDFKVKGAWL 133
Query: 158 RRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMIMAFVIVLDRI 216
SC + G+ I +D FS+ V NVD A I + +++L I
Sbjct: 134 DDSCVVY--AGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDYAFIASLIVILVEI 190
>AT1G53900.1 | chr1:20127634-20130834 FORWARD LENGTH=581
Length = 580
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 28 YTVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLALTPQ 87
+T+W RS + F + G +V+D G+L +RVDNY+ + ++ LMD +G L L +
Sbjct: 32 FTIWMRS-LVFH-SKGCTVFDSKGNLIYRVDNYNSKS---CSEVYLMDLYGKILFTLRQK 86
Query: 88 IISMHDQWNCYRASEEGQGKRARSQQLFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGHV 147
+ + W Y ++ G R + ++ F K SS +V M G D H
Sbjct: 87 KLGLFKSWKGYNST----GTRFQLRKNF---KILPKGSSSSYKVVM-GSRIVDGD---HQ 135
Query: 148 PAFSIEGSFKRRSC-KIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMI 206
+ I KR+S I + G +A + +K++ SL L +DV ++ V+P ++ +
Sbjct: 136 SCYKI---VKRKSVFTIEDGSGRLLAEVKKKQSNIKSLD--LGKDVLTMMVEPQLETEIF 190
Query: 207 MAFV 210
F+
Sbjct: 191 EEFI 194
>AT1G53880.1 | chr1:20115069-20118269 FORWARD LENGTH=581
Length = 580
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 22/184 (11%)
Query: 28 YTVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLALTPQ 87
+T+W RS + F + G +V+D G+L +RVDNY+ + ++ LMD +G L L +
Sbjct: 32 FTIWMRS-LVFH-SKGCTVFDSKGNLIYRVDNYNSKS---CSEVYLMDLYGKILFTLRQK 86
Query: 88 IISMHDQWNCYRASEEGQGKRARSQQLFSMRKCSVMQSSHEAEVHMSGCTHASSDRTGHV 147
+ + W Y ++ G R + ++ F K SS +V M G D H
Sbjct: 87 KLGLFKSWKGYNST----GTRFQLRKNF---KILPKGSSSSYKVVM-GSRIVDGD---HQ 135
Query: 148 PAFSIEGSFKRRSC-KIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVDCAMI 206
+ I KR+S I + G +A + +K++ SL L +DV ++ V+P ++ +
Sbjct: 136 SCYKI---VKRKSVFTIEDGSGRLLAEVKKKQSNIKSLD--LGKDVLTMMVEPQLETEIF 190
Query: 207 MAFV 210
F+
Sbjct: 191 EEFI 194
>AT3G14260.1 | chr3:4747986-4748779 REVERSE LENGTH=231
Length = 230
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 23/189 (12%)
Query: 28 YTVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNYSRRRKLFSGDLLLMDGHGSPLLALTPQ 87
+T+W +S + T+G +V+D G++ +RVDNY+ + ++ LMD G L L Q
Sbjct: 51 FTIWMKSLVF--NTNGCTVFDSKGNIIYRVDNYNSKS---CREVYLMDLSGHVLFTLRRQ 105
Query: 88 IISMHDQWNCYRASEEGQGKRARSQQLFSMRKCSVMQ-----SSHEAEVHMSGCTHASSD 142
+ W YR+S + + + K +V Q SS V+ C +
Sbjct: 106 KFGLFKTWEGYRSSSATVESTTKLE--YFRVKNNVFQVPNKDSSSSYRVNAGSCRNDEQ- 162
Query: 143 RTGHVPAFSIEGSFKRRSCKIRNSGGEEVARITRKKAGAASLSLTLAEDVFSLEVQPNVD 202
+ GS S I ++ G+ +A + RK++ L L +DV ++ V+ VD
Sbjct: 163 ---YCYKMVTRGS----SLAIEDNCGKLLAEVKRKQSING---LKLGDDVLTMMVESQVD 212
Query: 203 CAMIMAFVI 211
+ I+ V+
Sbjct: 213 HSFIIGLVL 221
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.132 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,592,408
Number of extensions: 171598
Number of successful extensions: 362
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 343
Number of HSP's successfully gapped: 15
Length of query: 228
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 133
Effective length of database: 8,502,049
Effective search space: 1130772517
Effective search space used: 1130772517
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 110 (47.0 bits)