BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0118400 Os12g0118400|AK111804
(556 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10840.1 | chr3:3391207-3393281 REVERSE LENGTH=467 395 e-110
AT2G26650.1 | chr2:11331965-11336444 REVERSE LENGTH=858 104 2e-22
AT4G22200.1 | chr4:11746666-11750091 REVERSE LENGTH=803 100 3e-21
AT5G46240.1 | chr5:18743652-18746561 REVERSE LENGTH=678 96 6e-20
AT2G25600.1 | chr2:10894603-10898369 FORWARD LENGTH=889 90 3e-18
AT4G32500.1 | chr4:15681122-15685214 FORWARD LENGTH=881 90 4e-18
AT4G32650.1 | chr4:15751482-15754797 REVERSE LENGTH=663 84 2e-16
AT1G52750.1 | chr1:19646785-19649208 REVERSE LENGTH=634 83 4e-16
AT1G80280.1 | chr1:30183839-30186141 REVERSE LENGTH=648 82 6e-16
AT1G15490.1 | chr1:5320859-5323422 REVERSE LENGTH=649 81 1e-15
AT4G18290.1 | chr4:10115418-10118477 FORWARD LENGTH=698 81 2e-15
AT3G02850.1 | chr3:619701-623473 REVERSE LENGTH=829 70 4e-12
AT5G37500.1 | chr5:14889758-14894883 REVERSE LENGTH=821 65 1e-10
AT4G36530.2 | chr4:17240120-17241770 REVERSE LENGTH=379 63 4e-10
AT1G13820.1 | chr1:4735622-4737617 FORWARD LENGTH=340 51 1e-06
>AT3G10840.1 | chr3:3391207-3393281 REVERSE LENGTH=467
Length = 466
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/383 (51%), Positives = 263/383 (68%), Gaps = 22/383 (5%)
Query: 174 SSFYEINGVRVHHKVCTHEDSSDQSPDSAITNADQNQIGLPIVLLHGFGSSVFSWTHIMR 233
S F E GV +HHKV SD +++ + + P++LLHGFG+SVFSW +M+
Sbjct: 92 SCFCEFQGVHIHHKVLDPHTLSDDVSNTSPHAQETPKTKFPMILLHGFGASVFSWNRVMK 151
Query: 234 PLARIAGAKVLAFDRPAFGLTSRTI--WSG--DDTKPINPYSMAFSVMATLAFIDQLGAK 289
PLAR+ +KVLAFDRPAFGLTSR +SG +D KP+NPYSM +SV+ TL FID L A
Sbjct: 152 PLARLVSSKVLAFDRPAFGLTSRIFHPFSGATNDAKPLNPYSMVYSVLTTLYFIDVLAAD 211
Query: 290 KAVLVGHSAGCLVAVEAYFEAPERVAALVLVAPAIFVPVFRRKGVKENGVGEQEWQNKKD 349
KA+LVGHSAGC VA++AYFEAPERVAAL+LVAPAIF P + V GE
Sbjct: 212 KAILVGHSAGCPVALDAYFEAPERVAALILVAPAIFAP----RPVATTDAGENR------ 261
Query: 350 SNDSNLPTNPLNRIWGKFLELCLWIAGFLMNMIRAIGGVVRSLYYKSVVAVLRSSVGVML 409
D PT+ G +EL + ++ ++ + ++ SLY K++ A LRS +GVML
Sbjct: 262 --DKEAPTS---NFLGTLVELTKGVIRAVLRVVTGMANMLSSLYKKALAAFLRSFLGVML 316
Query: 410 VRLIMDKFGILAVRNAWYDPSKVTDHVIQGYTKPLRSRGWEMALLEYTXXXXXXXX-XXX 468
VR+ ++KFG+ AVRNAWYD +VTDHV+QGYTKPL+++GW+ AL+E+T
Sbjct: 317 VRMAINKFGVTAVRNAWYDSKQVTDHVVQGYTKPLKAKGWDKALVEFTVATLTDNNGSEK 376
Query: 469 KVPVSERLSEISCPVLVVSGDTDRLVPRWNTERVARAIPGAGFEVIKNSGHLPQEERPEE 528
K+P+S+RL EI CPVL+V+GDTDR+VP WN ER+ARAIPG+ FEVIK GHLPQEE+P+E
Sbjct: 377 KLPLSKRLQEIKCPVLIVTGDTDRIVPAWNAERLARAIPGSVFEVIKKCGHLPQEEKPDE 436
Query: 529 FVSVVERFLRRAFGRPNNEQEQV 551
F+S+V +FL AFG ++Q+ V
Sbjct: 437 FISIVAKFLGNAFG--GSQQQDV 457
>AT2G26650.1 | chr2:11331965-11336444 REVERSE LENGTH=858
Length = 857
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 52/63 (82%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
YV SMYW ITTL+TVGYGD+H NT EM++ YMLFNL LTAY+IGNMTN VVHGTSRT
Sbjct: 240 YVTSMYWSITTLTTVGYGDLHPVNTKEMIFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRT 299
Query: 84 RKF 86
R F
Sbjct: 300 RNF 302
>AT4G22200.1 | chr4:11746666-11750091 REVERSE LENGTH=803
Length = 802
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 53/63 (84%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
Y+A++YW ITT++TVGYGD+HA NT EMV+ T YMLFNL LTAY+IGNMTN VV GT RT
Sbjct: 264 YIAAIYWSITTMTTVGYGDLHASNTIEMVFITVYMLFNLGLTAYLIGNMTNLVVEGTRRT 323
Query: 84 RKF 86
+F
Sbjct: 324 MEF 326
>AT5G46240.1 | chr5:18743652-18746561 REVERSE LENGTH=678
Length = 677
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
YV ++YW ITTL+T GYGD HAEN EM++ +M+FNL LTAY+IGNMTN VVH TSRT
Sbjct: 247 YVTALYWSITTLTTTGYGDFHAENPREMLFDIFFMMFNLGLTAYLIGNMTNLVVHWTSRT 306
Query: 84 RKFL--IRSMPMHLPRSLQYPPSTPHPLHSTAFSHSLRPRRPNGPPPAFASAEFPGSVPD 141
R F +R+ R+ PH + SH + G P ++
Sbjct: 307 RTFRDSVRAASEFASRN-----QLPHDIQDQMLSHICLKFKTEGLKQQETLNNLPKAIRS 361
Query: 142 S 142
S
Sbjct: 362 S 362
>AT2G25600.1 | chr2:10894603-10898369 FORWARD LENGTH=889
Length = 888
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
Y +MYW ITT ST GYGD+H N+ EM + YM+FNL L+AYIIGNMTN VVH T RT
Sbjct: 266 YNTAMYWSITTFSTTGYGDIHGVNSREMTFILFYMVFNLGLSAYIIGNMTNLVVHVTGRT 325
Query: 84 RKF 86
RKF
Sbjct: 326 RKF 328
>AT4G32500.1 | chr4:15681122-15685214 FORWARD LENGTH=881
Length = 880
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 45/63 (71%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
YV +MYW ITT ST GYGD+H N E + YM+FNL L AYIIGNMTN VVH TSRT
Sbjct: 264 YVTAMYWSITTFSTTGYGDIHGNNAEERAFILFYMIFNLGLLAYIIGNMTNLVVHVTSRT 323
Query: 84 RKF 86
R F
Sbjct: 324 RNF 326
>AT4G32650.1 | chr4:15751482-15754797 REVERSE LENGTH=663
Length = 662
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
Y SMYW I TL+TVGYGD+HA N+ E + YMLFN+ LT+YIIG MTN VVHG RT
Sbjct: 276 YTYSMYWSIVTLTTVGYGDLHAVNSREKTFNMFYMLFNIGLTSYIIGIMTNLVVHGALRT 335
Query: 84 RKFLIRS 90
F +RS
Sbjct: 336 --FAMRS 340
>AT1G52750.1 | chr1:19646785-19649208 REVERSE LENGTH=634
Length = 633
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 215 IVLLHGFGSSVFSWTHIMRPLARIAGAKVLAFDRPAFGLTSRTIWSGDDTKPI-NPYSMA 273
IVL+HGFG VFSW H+M L+ G +V+A+DRP +GLTSR I + + + NPY +
Sbjct: 356 IVLVHGFGGGVFSWRHVMGELSLQLGCRVVAYDRPGWGLTSRLIRKDWEKRNLANPYKLE 415
Query: 274 FSVMATLAFIDQLGAKKAVLVGHSAGCLVAVEA 306
V L+F ++G +LVGH G L+A++A
Sbjct: 416 SQVDLLLSFCSEMGFSSVILVGHDDGGLLALKA 448
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
Query: 409 LVR-LIMDKFGILAVRNAWYDPSKVTDHVIQGYTKPLRSRGWEMALLEYTXXXXXXXXXX 467
LVR L+ + L R AW D +K+T + Y PL W+ AL E +
Sbjct: 495 LVRPLLRTEITQLVNRRAWCDTTKLTTDITMLYKAPLCLEAWDEALNEISKLSYEMILSP 554
Query: 468 XKVPVSERLSEISCPVLVVSGDTDRLVPRWNTERVARAIPGAGFEVIKNSGHLPQEERPE 527
+ S PVLVV+G D LVP +++ +A + + I GHLP EE P
Sbjct: 555 QNASALVK-SIGDLPVLVVAGAEDALVPLKSSQVLASKLTNSRLVEISGCGHLPHEECPT 613
Query: 528 EFVSVVERFLRRAFGR-PNN 546
VS + F+ R + PN+
Sbjct: 614 TLVSALGSFICRLIPKLPNS 633
>AT1G80280.1 | chr1:30183839-30186141 REVERSE LENGTH=648
Length = 647
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 79/152 (51%), Gaps = 14/152 (9%)
Query: 192 EDSSDQSPDSAITNAD---QNQIGLPIVLLHGFGSSVFSWTHIMRPLARIAGAKVLAFDR 248
ED + S A D Q G +VL+HGFG VFSW H+M LA G V AFDR
Sbjct: 350 EDGINVSNFGATEQQDVGGNGQFG--VVLVHGFGGGVFSWRHVMSSLAHQLGCVVTAFDR 407
Query: 249 PAFGLTSRTIWSGDDTKPI-NPYSMAFSVMATLAFIDQLGAKKAVLVGHSAGCLVAVEAY 307
P +GLT+R + + + NPY++ V LAF ++G VLVGH G L+A++A
Sbjct: 408 PGWGLTARPHKKDLEEREMPNPYTLDNQVDMLLAFCHEMGFASVVLVGHDDGGLLALKAA 467
Query: 308 -----FEAPERVAALVLVAPAI---FVPVFRR 331
+ P +V +VL+ ++ VP F R
Sbjct: 468 QRLLETKDPIKVKGVVLLNVSLTREVVPAFAR 499
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 11/146 (7%)
Query: 400 VLRSSVGVM-LVR-LIMDKFGILAVRNAWYDPSKVTDHVIQGYTKPLRSRGWEMALLEYT 457
+L +S+G LVR L+ + + R AWYDP+K+T V++ Y PL GW+ AL E
Sbjct: 501 LLHTSLGKKHLVRPLLRTEIAQVVNRRAWYDPAKMTTDVLRLYKAPLHVEGWDEALHEIG 560
Query: 458 XXXXXXXXXXXKVPVSERLSEI----SCPVLVVSGDTDRLVPRWNTERVARAIPGAGFEV 513
+P LS + + PVLVV+G D LVP +++ +A + +
Sbjct: 561 RLSSEMV-----LPTQNALSLLKAVENLPVLVVAGAEDALVPLKSSQVMASKLENSRLVA 615
Query: 514 IKNSGHLPQEERPEEFVSVVERFLRR 539
I GHLP EE P+ ++ + F+ R
Sbjct: 616 ISGCGHLPHEECPKALLAAMCPFISR 641
>AT1G15490.1 | chr1:5320859-5323422 REVERSE LENGTH=649
Length = 648
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 206 ADQNQIGLPIVLLHGFGSSVFSWTHIMRPLARIAGAKVLAFDRPAFGLTSRTIWSG-DDT 264
+ Q G +VL+HGFG VFSW H+M LA+ G V AFDRP +GLT+R + ++
Sbjct: 362 GESGQFG--VVLVHGFGGGVFSWRHVMGSLAQQLGCVVTAFDRPGWGLTARPHKNDLEER 419
Query: 265 KPINPYSMAFSVMATLAFIDQLGAKKAVLVGHSAGCLVAVEA 306
+ +NPYS+ V +AF ++G V VGH G L+A++A
Sbjct: 420 QLLNPYSLENQVEMLIAFCYEMGFSSVVFVGHDDGGLLALKA 461
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
Query: 400 VLRSSVGVM-LVR-LIMDKFGILAVRNAWYDPSKVTDHVIQGYTKPLRSRGWEMALLEYT 457
+L +S+G LVR L+ + + R AWYDP+K+T V++ Y PL GW+ AL E
Sbjct: 498 LLHTSLGKKHLVRPLLRTEIAQVVNRRAWYDPAKMTTDVLRLYKAPLHVEGWDEALHEIG 557
Query: 458 XXXXXXXXXXXKVPVSERLSEISCPVLVVSGDTDRLVPRWNTERVARAIPGAGFEVIKNS 517
+ E + PVLV++G D LVP +++ +A + + I
Sbjct: 558 RLSSEMVLAPQNAASLLKAVE-NLPVLVIAGAEDALVPLKSSQGMASKLLNSRLVAISGC 616
Query: 518 GHLPQEERPEEFVSVVERFLRRAFGRPNNEQE 549
GHLP EE P+ ++ + F+ R RP+ + +
Sbjct: 617 GHLPHEECPKALLAAMSPFITRLVIRPDLQSQ 648
>AT4G18290.1 | chr4:10115418-10118477 FORWARD LENGTH=698
Length = 697
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 3/90 (3%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
YV ++YW ITTL+T GYGD+HAEN EM++ +MLFNL T+Y+IGNMTN VVH TSRT
Sbjct: 247 YVTALYWSITTLTTTGYGDLHAENPREMLFFVFFMLFNLGFTSYLIGNMTNLVVHWTSRT 306
Query: 84 RKF--LIRSMPMHLPRSLQYPPSTPHPLHS 111
R F +R+ R+ Q PP+ + S
Sbjct: 307 RNFRDTVRAASEFASRN-QLPPNIQDQMLS 335
>AT3G02850.1 | chr3:619701-623473 REVERSE LENGTH=829
Length = 828
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
Y SMY+ + T++TVGYGD+HA N EM++ Y+ F++ L AY+IGNMT +V G S+T
Sbjct: 275 YTTSMYFAVVTMATVGYGDIHAVNMREMIFAMVYISFDMILGAYLIGNMTALIVKG-SKT 333
Query: 84 RKF 86
+F
Sbjct: 334 ERF 336
>AT5G37500.1 | chr5:14889758-14894883 REVERSE LENGTH=821
Length = 820
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%)
Query: 24 YVASMYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRT 83
Y ++Y+ I T++TVGYGD+HA N EM++ Y+ F++ L AY+IGN+T +V G++
Sbjct: 258 YTTALYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMVLGAYLIGNITALIVKGSNTE 317
Query: 84 R 84
R
Sbjct: 318 R 318
>AT4G36530.2 | chr4:17240120-17241770 REVERSE LENGTH=379
Length = 378
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 126/322 (39%), Gaps = 74/322 (22%)
Query: 212 GLPIVLLHGFGSSVFSWTHIMRPLARIAGAKVLAFDRPAFGLTSRTIWSGDDTKPINPYS 271
G P+VL+HGFG+SVF W + + LA+ KV A D FG WS K + Y
Sbjct: 99 GSPLVLIHGFGASVFHWRYNIPELAK--KYKVYALDLLGFG------WS---DKALIEYD 147
Query: 272 MAFSVMATLAFIDQLGAKKAVLVGHSAGCLVAVEAYFEAPERVAALVLVAPAIFVPVFRR 331
+ F+ ++ + AV+VG+S G A+ PE+V + L+ A
Sbjct: 148 AMVWTDQVIDFMKEVVKEPAVVVGNSLGGFTALSVAVGLPEQVTGVALLNSA-------- 199
Query: 332 KGVKENGVGEQEWQNKKDSND---SNLPTNPLNRIWGKFLELCLWIAGFLMNMIRA---I 385
G E + ++++++ + PL I+ + + GFL + I
Sbjct: 200 ------GQFAAESRKREEADETVITKFIVKPLKEIFQRV------VLGFLFWQAKQPSRI 247
Query: 386 GGVVRSLYYKSVVAVLRSSVGVMLVRLIMDKFGILAVRNAWYDPSKVTDHVIQGYTKPLR 445
V++S+Y D + V D++++ +KP
Sbjct: 248 ESVLKSVY---------------------------------IDSTNVDDYLVESISKPAT 274
Query: 446 SRGWEMALLEYTXXXXXXXXXXXKVPVSERLSEISCPVLVVSGDTDRLVPRWNTERVARA 505
A Y + + LS+++CP+L+V GD D V E++ +A
Sbjct: 275 DPN---AGEVYYRLMTRFLTNQSRYTLDSVLSKMTCPLLLVWGDLDPWVGPAKAEKI-KA 330
Query: 506 IPGAGFEVIKNSGHLPQEERPE 527
V +GH P +E PE
Sbjct: 331 FYSNSSLVHLQAGHCPHDEVPE 352
>AT1G13820.1 | chr1:4735622-4737617 FORWARD LENGTH=340
Length = 339
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 196 DQSPDSAITNADQNQIGLPIVLLHGFGSSVFSWTHIMRPLARIAGAKVLAFDRPAFGLTS 255
D S +T +N+ P+VLLHGF SS W + PL AG + AFD +G +
Sbjct: 67 DSIMSSCVTPLMRNETT-PVVLLHGFDSSCLEWRYTY-PLLEEAGLETWAFDILGWGFS- 123
Query: 256 RTIWSGDDTKPINPYSMAFSVMATLAFIDQLGAKKAVLVGHSAGCLVAVEAYFEAPERVA 315
D + P +A F + VLVG S G VA++ PE V
Sbjct: 124 -------DLDKLPPCDVASKREHFYKFWKSHIKRPVVLVGPSLGAAVAIDIAVNHPEAVE 176
Query: 316 ALVLVAPAIF 325
+LVL+ +++
Sbjct: 177 SLVLMDASVY 186
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,574,288
Number of extensions: 478341
Number of successful extensions: 1715
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 1723
Number of HSP's successfully gapped: 18
Length of query: 556
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 452
Effective length of database: 8,255,305
Effective search space: 3731397860
Effective search space used: 3731397860
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)