BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0100100 Os12g0100100|AK061492
(228 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G59950.5 | chr5:24140235-24141504 FORWARD LENGTH=246 154 3e-38
AT5G02530.1 | chr5:564332-565776 REVERSE LENGTH=293 153 9e-38
AT5G37720.1 | chr5:14981805-14983978 REVERSE LENGTH=289 124 6e-29
AT1G66260.1 | chr1:24695895-24697883 REVERSE LENGTH=296 120 7e-28
AT2G23350.1 | chr2:9943209-9946041 FORWARD LENGTH=663 58 3e-09
AT1G71770.1 | chr1:26990777-26993489 REVERSE LENGTH=683 56 1e-08
AT2G37220.1 | chr2:15634980-15636331 REVERSE LENGTH=290 56 2e-08
AT3G10400.1 | chr3:3232636-3233421 FORWARD LENGTH=262 54 9e-08
AT3G08000.1 | chr3:2555034-2555829 REVERSE LENGTH=144 53 1e-07
AT2G36660.1 | chr2:15361476-15364398 REVERSE LENGTH=610 53 1e-07
AT1G22760.1 | chr1:8055599-8058799 FORWARD LENGTH=661 53 1e-07
AT1G60000.1 | chr1:22093678-22094540 REVERSE LENGTH=259 52 3e-07
AT1G49760.1 | chr1:18416740-18419753 FORWARD LENGTH=672 52 4e-07
AT4G34110.1 | chr4:16336732-16339892 FORWARD LENGTH=630 51 4e-07
AT1G34140.1 | chr1:12433356-12434735 REVERSE LENGTH=408 50 8e-07
AT3G53460.4 | chr3:19819738-19821423 REVERSE LENGTH=364 50 9e-07
AT2G35410.1 | chr2:14898341-14899590 FORWARD LENGTH=309 48 4e-06
AT3G52380.1 | chr3:19421619-19422855 FORWARD LENGTH=330 47 6e-06
>AT5G59950.5 | chr5:24140235-24141504 FORWARD LENGTH=246
Length = 245
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
Query: 65 AANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSD 124
+A +ETGTKLYISNLDY V NEDIKELF+EVG++KRY++++DRSGRSKGTAEVV+SR+ D
Sbjct: 81 SAGIETGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGRSKGTAEVVYSRRGD 140
Query: 125 ALAAVKRYNNVQLDGKPMKLELIGINIEXXXX-XXXXXXXXXXYFDFPPKXXXXXXXXXX 183
ALAAVK+YN+VQLDGKPMK+E++G N++ +
Sbjct: 141 ALAAVKKYNDVQLDGKPMKIEIVGTNLQTAAAPSGRPANGNSNGAPWSRGGQGRGGQQRG 200
Query: 184 XXXXXXXXXXXXXXXXXXXXXXXKISAEDLDADLDKYHAEGMQ 226
KISAEDLDADLDKYH+ M+
Sbjct: 201 GGRGGGGRGGGGRGRRPGKGPAEKISAEDLDADLDKYHSGDME 243
>AT5G02530.1 | chr5:564332-565776 REVERSE LENGTH=293
Length = 292
Score = 153 bits (386), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 71/87 (81%), Positives = 81/87 (93%)
Query: 65 AANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSD 124
+++ETGTKLYISNLDY VSNEDIKELFSEVGD+KRY I+YDRSGRSKGTAEVVFSR+ D
Sbjct: 101 GSSIETGTKLYISNLDYGVSNEDIKELFSEVGDLKRYGIHYDRSGRSKGTAEVVFSRRGD 160
Query: 125 ALAAVKRYNNVQLDGKPMKLELIGINI 151
ALAAVKRYNNVQLDGK MK+E++G N+
Sbjct: 161 ALAAVKRYNNVQLDGKLMKIEIVGTNL 187
>AT5G37720.1 | chr5:14981805-14983978 REVERSE LENGTH=289
Length = 288
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 75/86 (87%)
Query: 65 AANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSD 124
A+ VE GT+L+++NLD V+NEDI+ELFSE+G+V+RY+I+YD++GR GTAEVV+ R+SD
Sbjct: 86 ASGVEVGTRLHVTNLDQGVTNEDIRELFSEIGEVERYAIHYDKNGRPSGTAEVVYPRRSD 145
Query: 125 ALAAVKRYNNVQLDGKPMKLELIGIN 150
A A+K+YNNV LDG+PM+LE++G N
Sbjct: 146 AFQALKKYNNVLLDGRPMRLEILGGN 171
>AT1G66260.1 | chr1:24695895-24697883 REVERSE LENGTH=296
Length = 295
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 75/87 (86%)
Query: 66 ANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDA 125
+ VE GT +YI+NLD V+NEDI+EL++E+G++KRY+I+YD++GR G+AEVV+ R+SDA
Sbjct: 101 SGVEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGRPSGSAEVVYMRRSDA 160
Query: 126 LAAVKRYNNVQLDGKPMKLELIGINIE 152
+ A+++YNNV LDG+PMKLE++G N E
Sbjct: 161 IQAMRKYNNVLLDGRPMKLEILGGNTE 187
>AT2G23350.1 | chr2:9943209-9946041 FORWARD LENGTH=663
Length = 662
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%)
Query: 71 GTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVK 130
G LY+ NLD V++E ++ELF+E G + + D SG SKG+ V FS S+A +
Sbjct: 327 GLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLN 386
Query: 131 RYNNVQLDGKPMKLEL 146
N + GKP+ + L
Sbjct: 387 EMNGKMVGGKPLYVAL 402
>AT1G71770.1 | chr1:26990777-26993489 REVERSE LENGTH=683
Length = 682
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%)
Query: 71 GTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVK 130
G+ LY+ NLD +V++E +KE+FSE G+V + + G S+G V +S +AL A+K
Sbjct: 341 GSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMK 400
Query: 131 RYNNVQLDGKPMKLEL 146
N + KP+ + L
Sbjct: 401 EMNGKMIGRKPLYVAL 416
>AT2G37220.1 | chr2:15634980-15636331 REVERSE LENGTH=290
Length = 289
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 58 AYVHPTPAANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDR-SGRSKGTAE 116
A V P + KL++ NL + V + + +LF G+V+ + YD+ +GRS+G
Sbjct: 77 ADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGF 136
Query: 117 VVFSRKSDALAAVKRYNNVQLDGKPMKL 144
V S S+ AA +++N +LDG+P+++
Sbjct: 137 VTMSSVSEVEAAAQQFNGYELDGRPLRV 164
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 73 KLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDR-SGRSKGTAEVVFSRKSDALAAVKR 131
++Y+ NL + V + ++ LFSE G V + YDR SGRSKG V + + A+K
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 132 YNNVQLDGKPMKL 144
+ LDG+ +++
Sbjct: 265 LDGADLDGRQIRV 277
>AT3G10400.1 | chr3:3232636-3233421 FORWARD LENGTH=262
Length = 261
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 72 TKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGR-SKGTAEVVFSRKSDALAAVK 130
+ LY+SNLD++++N DI LFS G V R ++ DR R S+G A V++ + DA A +
Sbjct: 57 STLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAAR 116
Query: 131 RYNNVQLDGKPMKLELIGIN 150
+ L+G+ + + + N
Sbjct: 117 SMDAKILNGRKLTVSIAADN 136
>AT3G08000.1 | chr3:2555034-2555829 REVERSE LENGTH=144
Length = 143
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 73 KLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDR-SGRSKGTAEVVFSRKSDALAAVKR 131
KL+I L ++V + +K+ FS G+V I YD+ SGRS+G V F+ + DAL+A
Sbjct: 42 KLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDA 101
Query: 132 YNNVQLDGKPMKLEL 146
+ L G+P+++
Sbjct: 102 MDGKGLLGRPLRISF 116
>AT2G36660.1 | chr2:15361476-15364398 REVERSE LENGTH=610
Length = 609
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%)
Query: 72 TKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKR 131
+ +Y+ N++ AV+ E++++ FS+ G + + D G+SKG V FS +A+ AVK
Sbjct: 304 SNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKT 363
Query: 132 YNNVQLDGKPM 142
++ GKP+
Sbjct: 364 FHGQMFHGKPL 374
>AT1G22760.1 | chr1:8055599-8058799 FORWARD LENGTH=661
Length = 660
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 71 GTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVK 130
G LY+ NLD +V +E +KE+FSE G+V + + G S+G V +S +AL A+
Sbjct: 331 GANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALS 390
Query: 131 RYNNVQLDGKPMKLEL 146
N + KP+ + L
Sbjct: 391 EMNGKMIGRKPLYIAL 406
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 64 PAANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKS 123
P+ + ++I NLD ++ N+ + E FS G + + D +GRSKG V F ++
Sbjct: 128 PSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEE 187
Query: 124 DALAAVKRYNNVQLDGK 140
A AA+ + N + ++ K
Sbjct: 188 SAQAAIDKLNGMLMNDK 204
>AT1G60000.1 | chr1:22093678-22094540 REVERSE LENGTH=259
Length = 258
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 69 ETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDR-SGRSKGTAEVVFSRKSDALA 127
ET KL++ NL + V++E + F E GDV + +D +GRS+G V +S K++
Sbjct: 174 ETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMET 233
Query: 128 AVKRYNNVQLDGKPMKLEL 146
A++ + +L+G+ +++ L
Sbjct: 234 ALESLDGFELEGRAIRVNL 252
>AT1G49760.1 | chr1:18416740-18419753 FORWARD LENGTH=672
Length = 671
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%)
Query: 65 AANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSD 124
AA+ G+ LY+ NLD +V+++ ++E F+ G + + D SG S+G+ V FS +
Sbjct: 320 AADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEE 379
Query: 125 ALAAVKRYNNVQLDGKPMKLEL 146
A A+ N + KP+ + L
Sbjct: 380 ATRAITEMNGKMIVTKPLYVAL 401
>AT4G34110.1 | chr4:16336732-16339892 FORWARD LENGTH=630
Length = 629
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 65 AANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSD 124
AA+ + LY+ NLD ++S+E +KE+FS G V + D +G SKG+ V F+ +
Sbjct: 311 AADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEE 370
Query: 125 ALAAVKRYNNVQLDGKPM 142
A A+ + + ++ KP+
Sbjct: 371 ATEAMSQLSGKMIESKPL 388
>AT1G34140.1 | chr1:12433356-12434735 REVERSE LENGTH=408
Length = 407
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%)
Query: 71 GTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVK 130
G LY+ NLD +V N ++ELFSE G + + +G SKG V FS +A A+
Sbjct: 222 GMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAML 281
Query: 131 RYNNVQLDGKPMKLEL 146
+ N + KP+ + L
Sbjct: 282 KMNGKMVGNKPIYVSL 297
>AT3G53460.4 | chr3:19819738-19821423 REVERSE LENGTH=364
Length = 363
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 73 KLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDR-SGRSKGTAEVVFSRKSDALAAVKR 131
+LY+ NL + V + ++ LF+E G V + YDR SGRSKG V S + A+
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 132 YNNVQLDGKPMKL 144
N LDG+ +++
Sbjct: 339 LNGADLDGRQIRV 351
>AT2G35410.1 | chr2:14898341-14899590 FORWARD LENGTH=309
Length = 308
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 73 KLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRY 132
KL++ NL +++S DI ELF + G V I + G+++G A V + +A AA+ ++
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKF 155
Query: 133 NNVQLDGK 140
+ Q+ G+
Sbjct: 156 DTFQVSGR 163
>AT3G52380.1 | chr3:19421619-19422855 FORWARD LENGTH=330
Length = 329
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 63 TPAANVETGTKLYISNLDYAVSNEDIKELFSEVGDVKRYSINYDR-SGRSKGTAEVVFSR 121
T A+ E G +LY+ NL Y +++ ++ ++F E G V I YD+ + RS+G V
Sbjct: 108 TTQASGEEG-RLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGS 166
Query: 122 KSDALAAVKRYNNVQLDGKPMKL 144
+A A++ +N+ Q+ G+ +K+
Sbjct: 167 IEEAKEAMQMFNSSQIGGRTVKV 189
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.132 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,915,953
Number of extensions: 92381
Number of successful extensions: 505
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 541
Number of HSP's successfully gapped: 22
Length of query: 228
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 133
Effective length of database: 8,502,049
Effective search space: 1130772517
Effective search space used: 1130772517
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 110 (47.0 bits)