BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0702700 Os11g0702700|AK064388
(391 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407 428 e-120
AT3G63270.1 | chr3:23375932-23377398 REVERSE LENGTH=397 354 6e-98
AT5G12010.1 | chr5:3877975-3879483 REVERSE LENGTH=503 140 1e-33
AT4G29780.1 | chr4:14579859-14581481 FORWARD LENGTH=541 122 2e-28
AT1G72270.1 | chr1:27199733-27211122 REVERSE LENGTH=2846 96 4e-20
AT3G19120.1 | chr3:6609678-6611018 REVERSE LENGTH=447 71 1e-12
AT5G41980.1 | chr5:16793765-16794889 FORWARD LENGTH=375 55 9e-08
>AT3G55350.1 | chr3:20518518-20520690 FORWARD LENGTH=407
Length = 406
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 195/355 (54%), Positives = 260/355 (73%), Gaps = 5/355 (1%)
Query: 37 DWWDGFCMRMSGTLSGIQDAQRFEFIFKMPRRTFNYICGLVRDEMMVRSSSYTFLDGKVL 96
DWWDGF R+ G G D + FE +FK+ R+TF+YIC LV+ + + ++++ +G L
Sbjct: 53 DWWDGFSRRIYG---GSTDPKTFESVFKISRKTFDYICSLVKADFTAKPANFSDSNGNPL 109
Query: 97 SLEDRVAVALIRLNSGGSLVTVGSAVGVNHSTVSLITWRFVEAMEERASHHLRWPDSSEV 156
SL DRVAVAL RL SG SL +G G+N STVS ITWRFVE+MEERA HHL WP S++
Sbjct: 110 SLNDRVAVALRRLGSGESLSVIGETFGMNQSTVSQITWRFVESMEERAIHHLSWP--SKL 167
Query: 157 EKIKSMFEKIHGLPNCCGVVDTTHITMCLSSAEPNCKVWLDHEKNYSMVLQAVISPDMRF 216
++IKS FEKI GLPNCCG +D THI M L + EP+ KVWLD EKN+SM LQAV+ PDMRF
Sbjct: 168 DEIKSKFEKISGLPNCCGAIDITHIVMNLPAVEPSNKVWLDGEKNFSMTLQAVVDPDMRF 227
Query: 217 MDIVTGWPGSMKESSILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAGYPLLPW 276
+D++ GWPGS+ + +L +SG +K+ EKG RLNG K+ +S+ +E+ EYI+GD+G+PLLPW
Sbjct: 228 LDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELREYIVGDSGFPLLPW 287
Query: 277 LLTPYQEKDLSDSKLEFNKRHAAAITVAPSTLANFKDTWKFLHGEMWRPDKHRLPRIIHV 336
LLTPYQ K S + EFNKRH+ A A L+ KD W+ ++G MW PD++RLPRII V
Sbjct: 288 LLTPYQGKPTSLPQTEFNKRHSEATKAAQMALSKLKDRWRIINGVMWMPDRNRLPRIIFV 347
Query: 337 CCMLHNIIICLQDATIDEAAMSNDHDANYKQQVCQLADENAVRVRDKLSEHLVSR 391
CC+LHNIII ++D T+D+ +S HD NY+Q+ C+LADE + +RD+LS+ L +
Sbjct: 348 CCLLHNIIIDMEDQTLDDQPLSQQHDMNYRQRSCKLADEASSVLRDELSDQLCGK 402
>AT3G63270.1 | chr3:23375932-23377398 REVERSE LENGTH=397
Length = 396
Score = 354 bits (908), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 167/354 (47%), Positives = 232/354 (65%), Gaps = 2/354 (0%)
Query: 37 DWWDGFCMRMSGTLSGIQDAQRFEFIFKMPRRTFNYICGLVRDEMMVRSSSYTF-LDGKV 95
DWWD F +R S + F+ F+ + TF+YIC LVR++++ R S ++G++
Sbjct: 43 DWWDTFWLRNSSPSVPSDEDYAFKHFFRASKTTFSYICSLVREDLISRPPSGLINIEGRL 102
Query: 96 LSLEDRVAVALIRLNSGGSLVTVGSAVGVNHSTVSLITWRFVEAMEERASHHLRWPDSSE 155
LS+E +VA+AL RL SG S V+VG+A GV STVS +TWRF+EA+EERA HHLRWPDS
Sbjct: 103 LSVEKQVAIALRRLASGDSQVSVGAAFGVGQSTVSQVTWRFIEALEERAKHHLRWPDSDR 162
Query: 156 VEKIKSMFEKIHGLPNCCGVVDTTHITMCLSSAEPNCKVWLDHEKNYSMVLQAVISPDMR 215
+E+IKS FE+++GLPNCCG +DTTHI M L + + + W D EKNYSM LQ V +MR
Sbjct: 163 IEEIKSKFEEMYGLPNCCGAIDTTHIIMTLPAVQAS-DDWCDQEKNYSMFLQGVFDHEMR 221
Query: 216 FMDIVTGWPGSMKESSILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAGYPLLP 275
F+++VTGWPG M S +L SG FK+CE L+G+ +S G++I EY++G YPLLP
Sbjct: 222 FLNMVTGWPGGMTVSKLLKFSGFFKLCENAQILDGNPKTLSQGAQIREYVVGGISYPLLP 281
Query: 276 WLLTPYQEKDLSDSKLEFNKRHAAAITVAPSTLANFKDTWKFLHGEMWRPDKHRLPRIIH 335
WL+TP+ SDS + FN+RH +VA + K +W+ L MWRPD+ +LP II
Sbjct: 282 WLITPHDSDHPSDSMVAFNERHEKVRSVAATAFQQLKGSWRILSKVMWRPDRRKLPSIIL 341
Query: 336 VCCMLHNIIICLQDATIDEAAMSNDHDANYKQQVCQLADENAVRVRDKLSEHLV 389
VCC+LHNIII D ++ +S HD+ Y + C+ + +R L+EHL+
Sbjct: 342 VCCLLHNIIIDCGDYLQEDVPLSGHHDSGYADRYCKQTEPLGSELRGCLTEHLL 395
>AT5G12010.1 | chr5:3877975-3879483 REVERSE LENGTH=503
Length = 502
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 162/358 (45%), Gaps = 32/358 (8%)
Query: 38 WWDGFCMRMSGTLSGIQDAQRFEFIFKMPRRTFNYICGLVRDEMMVRSSSYTFLDGKVLS 97
WW+ C R+ + F+ F+M + TF IC DE+ + +
Sbjct: 161 WWEE-CSRLD------YPEEDFKKAFRMSKSTFELIC----DELNSAVAKEDTALRNAIP 209
Query: 98 LEDRVAVALIRLNSGGSLVTVGSAVGVNHSTVSLITWRFVEAMEE-RASHHLRWPDSSEV 156
+ RVAV + RL +G L V G+ ST + +A+++ +L+WPD +
Sbjct: 210 VRQRVAVCIWRLATGEPLRLVSKKFGLGISTCHKLVLEVCKAIKDVLMPKYLQWPDDESL 269
Query: 157 EKIKSMFEKIHGLPNCCGVVDTTHI-----TMCLSSAEPNCKVWLDHEKNYSMVLQAVIS 211
I+ FE + G+PN G + TTHI + ++S + + +YS+ +QAV++
Sbjct: 270 RNIRERFESVSGIPNVVGSMYTTHIPIIAPKISVASYFNKRHTERNQKTSYSITIQAVVN 329
Query: 212 PDMRFMDIVTGWPGSMKESSILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAGY 271
P F D+ GWPGSM + +L S L++ G L G ++ G G+
Sbjct: 330 PKGVFTDLCIGWPGSMPDDKVLEKSLLYQRANNGGLLKGM------------WVAGGPGH 377
Query: 272 PLLPWLLTPYQEKDLSDSKLEFNKRHAAAITVAPSTLANFKDTWKFLHGEMWRPDKHRLP 331
PLL W+L PY +++L+ ++ FN++ + VA K W L LP
Sbjct: 378 PLLDWVLVPYTQQNLTWTQHAFNEKMSEVQGVAKEAFGRLKGRWACLQKRT-EVKLQDLP 436
Query: 332 RIIHVCCMLHNIIICLQDATIDEAAMSNDHDANYKQQVCQLADENAVRVRDKLSEHLV 389
++ CC+LHNI ++ E + D + V L NA++ RD +S +L+
Sbjct: 437 TVLGACCVLHNICEMREEKMEPELMVEVIDDEVLPENV--LRSVNAMKARDTISHNLL 492
>AT4G29780.1 | chr4:14579859-14581481 FORWARD LENGTH=541
Length = 540
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 160/361 (44%), Gaps = 32/361 (8%)
Query: 37 DWWDGFCMRMSGTLSGIQDAQRFEFIFKMPRRTFNYICGLVRDEMMVRSSSYTFLDGKVL 96
DWWD R+S +D R EF +M + TFN IC +E+ + + +
Sbjct: 198 DWWD----RVSRP-DFPEDEFRREF--RMSKSTFNLIC----EELDTTVTKKNTMLRDAI 246
Query: 97 SLEDRVAVALIRLNSGGSLVTVGSAVGVNHSTVSLITWRFVEAMEE-RASHHLRWPDSSE 155
RV V + RL +G L V G+ ST + A+ + +L WP SE
Sbjct: 247 PAPKRVGVCVWRLATGAPLRHVSERFGLGISTCHKLVIEVCRAIYDVLMPKYLLWPSDSE 306
Query: 156 VEKIKSMFEKIHGLPNCCGVVDTTHITMCLSSAEPNCKVWLDH-EKN----YSMVLQAVI 210
+ K+ FE +H +PN G + TTHI + H E+N YS+ +Q V+
Sbjct: 307 INSTKAKFESVHKIPNVVGSIYTTHIPIIAPKVHVAAYFNKRHTERNQKTSYSITVQGVV 366
Query: 211 SPDMRFMDIVTGWPGSMKESSILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAG 270
+ D F D+ G PGS+ + IL S L +R ++ ++ D +I+G++G
Sbjct: 367 NADGIFTDVCIGNPGSLTDDQILEKSSL-------SRQRAARGMLRDS-----WIVGNSG 414
Query: 271 YPLLPWLLTPYQEKDLSDSKLEFNKRHAAAITVAPSTLANFKDTWKFLHGEMWRPDKHRL 330
+PL +LL PY ++L+ ++ FN+ +A + K W L L
Sbjct: 415 FPLTDYLLVPYTRQNLTWTQHAFNESIGEIQGIATAAFERLKGRWACLQKRT-EVKLQDL 473
Query: 331 PRIIHVCCMLHNIIICLQDATIDEAAMSNDHDANYKQQVCQLADENAVRVRDKLSEHLVS 390
P ++ CC+LHNI ++ + E D + + A +AV RD +S +L+
Sbjct: 474 PYVLGACCVLHNICEMRKEEMLPELKFEVFDDVAVPENNIRSA--SAVNTRDHISHNLLH 531
Query: 391 R 391
R
Sbjct: 532 R 532
>AT1G72270.1 | chr1:27199733-27211122 REVERSE LENGTH=2846
Length = 2845
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 169 LPNCCGVVDTTHITMCLSSAEPNCKVWLDHEKNYSMVLQAVISPDMRFMDIVTGWPGSMK 228
LPNC GVV + K L K S+++QA++ + RF+DI GWP +MK
Sbjct: 182 LPNCYGVVGFGRFEV---------KGKLLGAKG-SILVQALVDSNGRFVDISAGWPSTMK 231
Query: 229 ESSILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAGYPLLPWLLTPYQ-EKDLS 287
+I + LF + E+ L+G+ + +G + YI+GD+ PLLPWL+TPY D
Sbjct: 232 PEAIFRQTKLFSIAEE--VLSGAPTKLGNGVLVPRYILGDSCLPLLPWLVTPYDLTSDEE 289
Query: 288 DSKLEFNKRHAAAITVAPSTLANFKDTWKFLHGEMWRPDK-HRLPRIIHVCCMLHNIII- 345
+ EFN + A + W+ L + W+P+ +P +I C+LHN ++
Sbjct: 290 SFREEFNNVVHTGLHSVEIAFAKVRARWRILDKK-WKPETIEFMPFVITTGCLLHNFLVN 348
Query: 346 ----------CLQDATI-DEAAMSNDHDANYKQQVCQ-LADENAVRVRDKLSEHLVSR 391
C+ D M D D + + + A + R+RD ++E+L R
Sbjct: 349 SGDDDDSVEECVNGCEAGDNGEMRKDDDKEEETRSFEGEAYRESKRIRDAIAENLSRR 406
>AT3G19120.1 | chr3:6609678-6611018 REVERSE LENGTH=447
Length = 446
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 113/265 (42%), Gaps = 20/265 (7%)
Query: 90 FLDGKVLSLEDRVAVALI--RLNSGGSLVTVGSAVGVNHSTVSLITWRFVEAMEERA-SH 146
F+ LSL AVA++ RL G S T+ S ++ +S IT + +
Sbjct: 138 FITASNLSLPADYAVAMVLSRLAHGCSAKTLASRYSLDPYLISKITNMVTRLLATKLYPE 197
Query: 147 HLRWP-DSSEVEKIKSMFEKIHGLPNCCGVVDTTHITMCL-SSAEP----NCKVWLDHEK 200
++ P + + FE++ LPN CG +D+T + + + P CK D
Sbjct: 198 FIKIPVGKRRLIETTQGFEELTSLPNICGAIDSTPVKLRRRTKLNPRNIYGCKYGYD--- 254
Query: 201 NYSMVLQAVISPDMRFMDIVTGWPGSMKESSILHSSGLFKMCEKGARLNGSKMVVSDGSE 260
+++LQ V F D+ PG +SS S L+K G + K++ G
Sbjct: 255 --AVLLQVVADHKKIFWDVCVKAPGGEDDSSHFRDSLLYKRLTSG-DIVWEKVINIRGHH 311
Query: 261 IGEYIIGDAGYPLLPWLLTPYQEKDLSDSKLE--FNKRHAAAITVAPSTLANFKDTWKFL 318
+ YI+GD YPLL +L+TP+ S + E F+ +V + K WK L
Sbjct: 312 VRPYIVGDWCYPLLSFLMTPFSPNG-SGTPPENLFDGMLMKGRSVVVEAIGLLKARWKIL 370
Query: 319 HGEMWRPDKHRLPRIIHVCCMLHNI 343
+ P+ I CC+LHN+
Sbjct: 371 QS--LNVGVNHAPQTIVACCVLHNL 393
>AT5G41980.1 | chr5:16793765-16794889 FORWARD LENGTH=375
Length = 374
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 171 NCCGVVDTTHITMCLSSAEPNCKVWLDHEKNYSMVLQAVISPDMRFMDIVTGWPGSMKES 230
+C GVVD+ HI + + E + + + + A S D+RF ++ GW GS +
Sbjct: 142 DCVGVVDSFHIPVMVGVDEQGP--FRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQ 199
Query: 231 SILHSSGLFKMCEKGARLNGSKMVVSDGSEIGEYIIGDAGYPLLPWLLTPYQ---EKDLS 287
+L++ A +K+ V G+Y I D YP LP + PY
Sbjct: 200 QVLNA----------ALTRRNKLQVPQ----GKYYIVDNKYPNLPGFIAPYHGVSTNSRE 245
Query: 288 DSKLEFNKRHAAAITVAPSTLANFKDTWKFLHGEMWRPDKHRLPRIIHVCCMLHN----- 342
++K FN+RH T K+ + L P + ++ +I C LHN
Sbjct: 246 EAKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQTQVKLVI-AACALHNYVRLE 304
Query: 343 -----IIICLQDATIDEAAMSNDHDANYKQQVCQLAD----------ENAVRVRDKLSEH 387
+ ++ T+ EA D + +++ ++ E+++R+RD+++
Sbjct: 305 KPDDLVFRMFEEETLAEAG--EDREVALEEEQVEIVGQEHGFRPEEVEDSLRLRDEIASE 362
Query: 388 L 388
L
Sbjct: 363 L 363
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,817,220
Number of extensions: 318240
Number of successful extensions: 734
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 719
Number of HSP's successfully gapped: 7
Length of query: 391
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 290
Effective length of database: 8,337,553
Effective search space: 2417890370
Effective search space used: 2417890370
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)