BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0684700 Os11g0684700|Os11g0684700
         (998 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07040.1  | chr3:2226244-2229024 REVERSE LENGTH=927            153   4e-37
AT3G46530.1  | chr3:17130739-17133246 REVERSE LENGTH=836          139   7e-33
AT1G58390.1  | chr1:21690962-21693891 REVERSE LENGTH=908          139   7e-33
AT1G58410.1  | chr1:21701286-21704255 REVERSE LENGTH=900          132   1e-30
AT3G46730.1  | chr3:17213069-17215612 REVERSE LENGTH=848          131   2e-30
AT3G50950.2  | chr3:18936127-18938685 FORWARD LENGTH=853          126   7e-29
AT1G59124.1  | chr1:21816832-21819653 FORWARD LENGTH=856          118   2e-26
AT1G58807.1  | chr1:21780574-21783793 FORWARD LENGTH=1018         117   2e-26
AT3G46710.1  | chr3:17206489-17209032 REVERSE LENGTH=848          115   1e-25
AT1G59780.1  | chr1:21993581-21997691 REVERSE LENGTH=907          114   2e-25
AT1G50180.1  | chr1:18584235-18587136 FORWARD LENGTH=858          114   3e-25
AT5G35450.1  | chr5:13667809-13670685 FORWARD LENGTH=902          114   3e-25
AT1G58602.1  | chr1:21760167-21763765 FORWARD LENGTH=1139         110   3e-24
AT1G53350.1  | chr1:19903899-19907515 FORWARD LENGTH=928          108   1e-23
AT5G43470.1  | chr5:17463130-17466658 REVERSE LENGTH=909          107   4e-23
AT1G59218.1  | chr1:21828398-21831713 FORWARD LENGTH=1050         107   5e-23
AT1G58848.1  | chr1:21792140-21795455 FORWARD LENGTH=1050         107   5e-23
AT5G48620.1  | chr5:19717406-19720932 FORWARD LENGTH=909          106   6e-23
AT1G59620.1  | chr1:21902627-21905527 FORWARD LENGTH=843          102   1e-21
AT1G10920.1  | chr1:3644587-3647004 REVERSE LENGTH=728             98   2e-20
AT1G58400.1  | chr1:21696165-21699118 REVERSE LENGTH=901           97   4e-20
AT3G14460.1  | chr3:4851990-4856264 REVERSE LENGTH=1425            97   6e-20
AT3G14470.1  | chr3:4857940-4861104 FORWARD LENGTH=1055            89   1e-17
AT1G61190.1  | chr1:22557602-22560687 FORWARD LENGTH=968           88   3e-17
AT1G61300.1  | chr1:22607714-22610175 REVERSE LENGTH=763           84   3e-16
AT1G61310.1  | chr1:22613166-22615943 REVERSE LENGTH=926           76   7e-14
AT1G12220.1  | chr1:4145011-4147680 FORWARD LENGTH=890             75   1e-13
AT1G61180.2  | chr1:22551486-22554185 FORWARD LENGTH=900           73   1e-12
AT5G41740.2  | chr5:16688687-16692801 FORWARD LENGTH=1115          64   3e-10
AT1G17600.1  | chr1:6053026-6056572 REVERSE LENGTH=1050            62   1e-09
AT5G48770.1  | chr5:19773277-19777242 REVERSE LENGTH=1191          60   6e-09
AT5G41540.1  | chr5:16612659-16616063 REVERSE LENGTH=1039          59   2e-08
AT1G12280.1  | chr1:4174875-4177559 REVERSE LENGTH=895             58   2e-08
AT4G27190.1  | chr4:13620977-13623934 REVERSE LENGTH=986           58   2e-08
AT1G12210.1  | chr1:4140948-4143605 FORWARD LENGTH=886             58   3e-08
AT5G41550.1  | chr5:16617232-16620785 REVERSE LENGTH=1086          55   2e-07
AT5G18350.1  | chr5:6074069-6078569 REVERSE LENGTH=1246            53   7e-07
AT4G10780.1  | chr4:6634779-6637457 REVERSE LENGTH=893             53   8e-07
AT1G27170.1  | chr1:9434718-9439219 FORWARD LENGTH=1385            52   1e-06
AT4G19060.1  | chr4:10445082-10446233 REVERSE LENGTH=384           50   6e-06
>AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927
          Length = 926

 Score =  153 bits (387), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 208/941 (22%), Positives = 385/941 (40%), Gaps = 114/941 (12%)

Query: 14  MGKLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHARTAVARLHAE 73
           +G++  VL+ E      +  E+  +++E  ++ + ++D     G       T + +    
Sbjct: 10  IGRILSVLENETLLLSGVHGEIDKMKKELLIMKSFLEDTHKHGGNGSTTTTTQLFQTFVA 69

Query: 74  EMLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKVQSRSSFSEE---IQKL 130
              DL + IED +D F +     H +     + + R  H  + + +R S +++   +  +
Sbjct: 70  NTRDLAYQIEDILDEFGY-----HIHGYRSCAKIWRAFHFPRYMWARHSIAQKLGMVNVM 124

Query: 131 RRRLSEAQQRVXXXXXXXXXXXXGFEP------RXXXXTPARAACGPPVGIGEPMEELLS 184
            + +S++ +R               +            +    +    VGI  P  +L+ 
Sbjct: 125 IQSISDSMKRYYHSENYQAALLPPIDDGDAKWVNNISESSLFFSENSLVGIDAPKGKLIG 184

Query: 185 LLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWM 244
            L  +  EP+++ V+++VG GG GKTTL+  ++     +  F   AW+    S    D  
Sbjct: 185 RL--LSPEPQRI-VVAVVGMGGSGKTTLSANIFKSQSVRRHFESYAWVTISKSYVIEDVF 241

Query: 245 RGILRDVLRQVR---PGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQL-RIIESIF 300
           R ++++  ++     P +   +  + L   L EYL+ KRY+          L R I    
Sbjct: 242 RTMIKEFYKEADTQIPAELYSLGYRELVEKLVEYLQSKRYIVVLDDVWTTGLWREISIAL 301

Query: 301 PDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDSKKLAFSG-----------LR 349
           PD   GSR+++TT +  VA +  +G G       L KED   + FS             +
Sbjct: 302 PDGIYGSRVMMTTRDMNVA-SFPYGIGSTKHEIELLKEDEAWVLFSNKAFPASLEQCRTQ 360

Query: 350 SVEPGQGPASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFA 409
           ++EP      L+ +C GLPLA+ S+   +  S++       ++   L  +L  + ++   
Sbjct: 361 NLEP--IARKLVERCQGLPLAIASLGSMM--STKKFESEWKKVYSTLNWEL--NNNHELK 414

Query: 410 QLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYT 469
            +R ++  +++        C LY  +FP N  +K+K +IR W+A+ +       ++EE  
Sbjct: 415 IVRSIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVEPIRGVKAEE-V 473

Query: 470 ADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGT----SLHDHP 525
           AD    +L+ RN++Q +        K  K H ++ E  L+ S  +RF       S  D  
Sbjct: 474 ADSYLNELVYRNMLQVILWNPFGRPKAFKMHDVIWEIALSVSKLERFCDVYNDDSDGDDA 533

Query: 526 RVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTISCLRKCKLLRVLDLQ 585
              +    +RHL +    Q E        + + SL +   A   +  L    LLR LDL+
Sbjct: 534 AETMENYGSRHLCI----QKEMTPDSIRATNLHSLLVCSSAKHKMELLPSLNLLRALDLE 589

Query: 586 ECNGLN-DDHLKHMYELWHLKYLSLG-GYINELPRSIQGLHCLETLDLRRTEIKFLPIEA 643
           + +     D L  M+   +LKYL+L    + ELP++   L  LETL+ + ++I+ LP+  
Sbjct: 590 DSSISKLPDCLVTMF---NLKYLNLSKTQVKELPKNFHKLVNLETLNTKHSKIEELPLGM 646

Query: 644 IMLPHLAHL--FGKFMLHKDDLKNAKKMSKLQKFFSSNKSNLKTLAGFITEEGKEFLQLI 701
             L  L +L  F +   H  +         + K +     +L+ +  F  E+  E ++ +
Sbjct: 647 WKLKKLRYLITFRRNEGHDSNWNYVLGTRVVPKIW--QLKDLQVMDCFNAED--ELIKNL 702

Query: 702 GHMKKLRKVKIWCKHVEGSSNYIADLSKAIQEFTKTPIDMDRVRFLSLDSEECSENFLSS 761
           G M +L ++ +     E   +    L+K           + R+RFLSL S +  E     
Sbjct: 703 GCMTQLTRISLVMVRREHGRDLCDSLNK-----------IKRIRFLSLTSIDEEEP---- 747

Query: 762 IHLEPCSEDYKYTLKSLKLHGNLLQLPLFVTLLSGLIELCISSATLTQEHXXXXXXXXXX 821
             LE        +++ L L G L ++P +   L  L  L +  + L +            
Sbjct: 748 --LEIDDLIATASIEKLFLAGKLERVPSWFNTLQNLTYLGLRGSQLQEN----------- 794

Query: 822 XXXXXVADKLENFEIKLGAFLSLRRLCFVVKNAASALPKFEQGAMPNLVSLQLLCQGLVG 881
                           + +  +L RL ++    A   P+                QG   
Sbjct: 795 ---------------AILSIQTLPRLVWLSFYNAYMGPRLR------------FAQGFQN 827

Query: 882 LSGIEIRHLKHLKEVTIDSRVTAQTRQDWEQAAKNHPNRPR 922
           L  +EI  +KHL EV I+     + ++ + +A +     PR
Sbjct: 828 LKILEIVQMKHLTEVVIEDGAMFELQKLYVRACRGLEYVPR 868
>AT3G46530.1 | chr3:17130739-17133246 REVERSE LENGTH=836
          Length = 835

 Score =  139 bits (351), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 173/699 (24%), Positives = 311/699 (44%), Gaps = 67/699 (9%)

Query: 11  EAVMGKLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHART-AVAR 69
           E V+GK+   L +E +   A+++++  L+ E   +   + D        +A  R   V++
Sbjct: 7   EFVVGKIGNYLIEEASMFMAVKEDLEELKTELTCIHGYLKD-------VEAREREDEVSK 59

Query: 70  LHAEEMLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKVQSRSSFSEEIQK 129
             ++ +LD  +D+ED +D + HL     S   G    + R+ +++ +     S  ++I+ 
Sbjct: 60  EWSKLVLDFAYDVEDVLDTY-HLKLEERSQRRG----LRRLTNKIGRKMDAYSIVDDIRI 114

Query: 130 LRRRLSEAQQRVXXXXXXXXXXXXG----FEPRXXXXTPARAACGPPVGIGEPMEELLSL 185
           L+RR+ +  ++             G       R      AR+     V +G   +  + L
Sbjct: 115 LKRRILDITRKRETYGIGGLKEPQGGGNTSSLRVRQLRRARSVDQEEVVVGLEDDAKILL 174

Query: 186 LDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMR 245
              ++ E +   +ISI G GGLGKT LA+ +Y+    KE+F +RAW       +T D + 
Sbjct: 175 EKLLDYEEKNRFIISIFGMGGLGKTALARKLYNSRDVKERFEYRAWTYVSQEYKTGDILM 234

Query: 246 GILRDVLRQVRPGDAMD----VDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIF 300
            I+R +   +  G+ ++       + LE  L   L+ K+YL         +    ++   
Sbjct: 235 RIIRSL--GMTSGEELEKIRKFAEEELEVYLYGLLEGKKYLVVVDDIWEREAWDSLKRAL 292

Query: 301 PDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDSKKL----AFSGLRSVEPG-- 354
           P N  GSR+I+TT  + VA     G  Y ++++ L  E+S +L    AF  ++  +    
Sbjct: 293 PCNHEGSRVIITTRIKAVAEGVD-GRFYAHKLRFLTFEESWELFEQRAFRNIQRKDEDLL 351

Query: 355 QGPASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKV 414
           +    ++ KC GLPL +V ++  L   S  T     ++C +L   LK+D       +  +
Sbjct: 352 KTGKEMVQKCRGLPLCIVVLAGLL---SRKTPSEWNDVCNSLWRRLKDDS----IHVAPI 404

Query: 415 LLD-NYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKN 473
           + D ++      +  C LYL IFP +  +  + +I   +AEG+ + D+    E+  A   
Sbjct: 405 VFDLSFKELRHESKLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMMMED-VARYY 463

Query: 474 FRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVGINTSN 533
             +LIDR++++ V  R   +V +C+ H ++ +  + KS    F+    +DH     +T+ 
Sbjct: 464 IEELIDRSLLEAV-RRERGKVMSCRIHDLLRDVAIKKSKELNFVNV-YNDHVAQHSSTTC 521

Query: 534 ARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTISC-LRKCKLLRVLDLQ------E 586
            R +     K+    +   +  R+RS   FG+    +       KLLRVLD        +
Sbjct: 522 RREVVHHQFKRYS--SEKRKNKRMRSFLYFGEFDHLVGLDFETLKLLRVLDFGSLWLPFK 579

Query: 587 CNGLNDDHLKHMYELWHLKYLSL-GGYINELPRS--IQGLHCLETLDLRRTEIKFLPIEA 643
            NG          +L HL+YL + G  IN+   +  I  L  L+TL +         I+ 
Sbjct: 580 ING----------DLIHLRYLGIDGNSINDFDIAAIISKLRFLQTLFVSDNYFIEETIDL 629

Query: 644 IMLPHLAHLFGKFM--LHKDDLKNAKKMSKLQKFFSSNK 680
             L  L H+ G F   L   D+ N + ++ +  F S NK
Sbjct: 630 RKLTSLRHVIGNFFGGLLIGDVANLQTLTSIS-FDSWNK 667
>AT1G58390.1 | chr1:21690962-21693891 REVERSE LENGTH=908
          Length = 907

 Score =  139 bits (350), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 175/715 (24%), Positives = 319/715 (44%), Gaps = 69/715 (9%)

Query: 16  KLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHART-AVARLHAEE 74
           KL+ +L +E  + + +E +V  L+++  ++++ + D       +DA   T AV R   EE
Sbjct: 12  KLWDLLSQECEQFQGVEDQVTGLKRDLNLLSSFLKD-------ADAKKHTTAVVRNVVEE 64

Query: 75  MLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKVQSRSSFSEEIQKLRRRL 134
           + ++ +D ED ++  T+LL       SG   +  R++     +  R   + ++  +R R+
Sbjct: 65  IKEIVYDAEDIIE--TYLLKEKLWKTSG---IKMRIRRHACIISDRRRNALDVGGIRTRI 119

Query: 135 SEAQQRVXXXXXXXXXXXXGF-EP-----RXXXXTPARAACGPPVGIGEPMEELLS-LLD 187
           S+  + +            G+ +P     R    T ++      VG+   +++L+  L+D
Sbjct: 120 SDVIRDMQSFGVQQAIVDGGYMQPQGDRQREMRQTFSKDYESDFVGLEVNVKKLVGYLVD 179

Query: 188 EVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMRGI 247
           E     E V+V+SI G GGLGKTTLA+ V++    K +F   AW+         +  + I
Sbjct: 180 E-----ENVQVVSITGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRKNVWQMI 234

Query: 248 LRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFPDNGTG 306
           L+++  + +  + + ++   L   L + L+  + L         +   +I+ IFP N  G
Sbjct: 235 LQNLTSREKKDEILQMEEAELHDKLFQLLETSKSLIVFDDIWKDEDWDLIKPIFPPN-KG 293

Query: 307 SRIIVTTDNQQVA--NTCSHGNGYVYQMKTLGKEDS----KKLAFSGLRSVEPGQGP--- 357
            ++++T+ N+ VA      + N   ++ + L  EDS    +++AF    + E        
Sbjct: 294 WKVLLTSQNESVAVRGDIKYLN---FKPECLAIEDSWTLFQRIAFPKKDASESKVDEEME 350

Query: 358 ---ASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKV 414
                +L  C GLPLA+  +   L  +++ T      L +N+GSD+      + + +  V
Sbjct: 351 DMGKQMLKHCGGLPLAIKVLGGLL--AAKYTMHDWERLSVNIGSDIVGRTSSNNSSIYHV 408

Query: 415 LLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSE--EYTADK 472
           L  +++    Y   C LYL  FP +  +  + +   W AEG + ++D    E  +     
Sbjct: 409 LSMSFEELPSYLKHCFLYLAHFPEDHKINVEKLSYCWAAEGISTAEDYHNGETIQDVGQS 468

Query: 473 NFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVGINTS 532
              +L+ RN+I        S   TC  H +M E  L K+  + F+  ++     VG+ +S
Sbjct: 469 YLEELVRRNMIIWERDATASRFGTCHLHDMMREVCLFKAKEENFLQIAVKS---VGVTSS 525

Query: 533 N---------ARHLSVDAAKQTECVASDEELSRVRSLTIFG------DAGDTISCLRKCK 577
           +         +R L V     T  V  D    ++RSL +        +     +   + K
Sbjct: 526 STGNSQSPCRSRRL-VYQCPTTLHVERDINNPKLRSLVVLWHDLWVENWKLLGTSFTRLK 584

Query: 578 LLRVLDLQECNGLNDDHLKHMYELWHLKYLSL-GGYINELPRSIQGLHCLETLDLR-RTE 635
           LLRVLDL   +         +  L HL+YLSL    ++ LP S+  L  L  L+L   TE
Sbjct: 585 LLRVLDLFYVDFEGMKLPFGIGNLIHLRYLSLQDAKVSHLPSSLGNLMLLIYLNLDVDTE 644

Query: 636 IKFLPIEAIMLPHLAHLFGKFMLHKDDLKNAKKMSKLQK--FFSSNKSNLKTLAG 688
             F+P   + +  L +L     +HK    + + + KL+   +FS+  S+ K L G
Sbjct: 645 FIFVPDVFMRMHELRYLKLPLHMHKKTRLSLRNLVKLETLVYFSTWHSSSKDLCG 699
>AT1G58410.1 | chr1:21701286-21704255 REVERSE LENGTH=900
          Length = 899

 Score =  132 bits (331), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 169/709 (23%), Positives = 306/709 (43%), Gaps = 58/709 (8%)

Query: 16  KLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHARTA-VARLHAEE 74
           KL+  L +EY++ K +E +V  L+    ++ + + D       +DA    + + R   EE
Sbjct: 10  KLWDRLSQEYDQFKGVEDQVTELKSNLNLLKSFLKD-------ADAKKHISEMVRHCVEE 62

Query: 75  MLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKVQSRSSFSEEIQKLRRRL 134
           + D+ +D ED ++ F             +  ++ R+K     +  R   + +I  + +R+
Sbjct: 63  IKDIVYDTEDIIETF-----ILKEKVEMKRGIMKRIKRFASTIMDRRELASDIGGISKRI 117

Query: 135 SEAQQRVXXXXXXXXXXXXGFEP-------RXXXXTPARAACGPPVGIGEPMEELLSLLD 187
           S+  Q +                       R    T +R +    VG+   +++L+  L 
Sbjct: 118 SKVIQDMQSFGVQQIITDGSRSSHPLQERQREMRHTFSRDSENDFVGMEANVKKLVGYL- 176

Query: 188 EVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMRGI 247
               E +  +++S+ G GGLGKTTLA+ V++    K++F   AW++           + I
Sbjct: 177 ---VEKDDYQIVSLTGMGGLGKTTLARQVFNHDVVKDRFDGFAWVSVSQEFTRISVWQTI 233

Query: 248 LRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFPDNGTG 306
           L+++  + R  +  ++    L   L   L+  + L         +   +I+ IFP    G
Sbjct: 234 LQNLTSKERKDEIQNMKEADLHDDLFRLLESSKTLIVLDDIWKEEDWDLIKPIFPPK-KG 292

Query: 307 SRIIVTTDNQQVANTCSHGNGYV-YQMKTLGKEDSKKLA---------FSGLRSVEPGQG 356
            ++++T+  + +A        Y+ ++ K L   DS  L           S  +  E  + 
Sbjct: 293 WKVLLTSRTESIA--MRGDTTYISFKPKCLSIPDSWTLFQSIAMPRKDTSEFKVDEEMEN 350

Query: 357 PASLLAK-CDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKVL 415
               + K C GL LA+  +   L  +++ T      L  N+GS + E    + + +  VL
Sbjct: 351 MGKKMIKHCGGLSLAVKVLGGLL--AAKYTLHDWKRLSENIGSHIVERTSGNNSSIDHVL 408

Query: 416 LDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYA--RSDDPRRSEEYTADKN 473
             +++    Y   C LYL  FP +  +  + +   W AEG +  R  D     + T D  
Sbjct: 409 SVSFEELPNYLKHCFLYLAHFPEDHEIDVEKLHYYWAAEGISERRRYDGETIRD-TGDSY 467

Query: 474 FRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVGINTSN 533
             +L+ RN++        S  +TC+ H +M E  L K+  + F+    +  P     T  
Sbjct: 468 IEELVRRNMVISERDVMTSRFETCRLHDMMREICLFKAKEENFLQIVSNHSPTSNPQTLG 527

Query: 534 ARHLSVDAAKQTECVASDEELSRVRSL-TIFGDAGD-----TISCLRKCKLLRVLDLQEC 587
           A    V     T  V   +   ++RSL  ++ D G+     + S   + KLLRVLDL + 
Sbjct: 528 ASRRFVLHNPTTLHVERYKNNPKLRSLVVVYDDIGNRRWMLSGSIFTRVKLLRVLDLVQA 587

Query: 588 NGLNDDHLKHMYELWHLKYLSL-GGYINELPRSIQGLHCLETLDLRR--TEIKFLPIEAI 644
                     + +L HL+YLSL    ++ LP S++ L  L  LD+R   T+I F+P   +
Sbjct: 588 KFKGGKLPSDIGKLIHLRYLSLKDAKVSHLPSSLRNLVLLIYLDIRTDFTDI-FVPNVFM 646

Query: 645 MLPHLAHL-FGKFMLHKD--DLKNAKKMSKLQKFFSSNKSNLKTLAGFI 690
            +  L +L   +FM  K   +L N +K+  L+  FS+  S+L+ L G +
Sbjct: 647 GMRELRYLELPRFMHEKTKLELSNLEKLEALEN-FSTKSSSLEDLRGMV 694
>AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848
          Length = 847

 Score =  131 bits (330), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 161/646 (24%), Positives = 282/646 (43%), Gaps = 90/646 (13%)

Query: 60  DAHART---AVARLHAEEMLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKK 116
           D  AR     V++   + +LD+ +DIED +D  T+ L     +       +    +++ K
Sbjct: 47  DVEAREREDEVSKEWTKLVLDIAYDIEDVLD--TYFLKLEERSLRRGLLRLT---NKIGK 101

Query: 117 VQSRSSFSEEIQKLRRRLSEAQQRVXXXXXXXXXXXXGFEPRXXXXTPARAAC---GPPV 173
            +   +  E+I+ L+RR+ +  ++               EPR    T  R       PPV
Sbjct: 102 KRDAYNIVEDIRTLKRRILDITRKRETFGIGSFN-----EPRGENITNVRVRQLRRAPPV 156

Query: 174 GIGEPMEELLSLLDEV---------EGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKE 224
              +  E ++ L D+V         + E ++  +ISI G GGLGKT LA+ +Y+    K 
Sbjct: 157 ---DQEELVVGLEDDVKILLVKLLSDNEKDKSYIISIFGMGGLGKTALARKLYNSGDVKR 213

Query: 225 KFYHRAWIAAVGSPETSDWMRGILRD---VLRQVRPGDAMDVDGQHLEASLREYLKDKRY 281
           +F  RAW       +T D +  I+R    V  +      M  + + LE  L   L+ K Y
Sbjct: 214 RFDCRAWTYVSQEYKTRDILIRIIRSLGIVSAEEMEKIKMFEEDEELEVYLYGLLEGKNY 273

Query: 282 LXXXXXXXXXQ-LRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDS 340
           +              ++   P +  GS++I+TT  + +A     G  Y ++++ L  E+S
Sbjct: 274 MVVVDDVWDPDAWESLKRALPCDHRGSKVIITTRIRAIAEGV-EGTVYAHKLRFLTFEES 332

Query: 341 KKL----AFSGLRSVEPG--QGPASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCL 394
             L    AFS +  V+    +    ++ KC GLPLA+V +S  L  S + T E   E+C 
Sbjct: 333 WTLFERKAFSNIEKVDEDLQRTGKEMVKKCGGLPLAIVVLSGLL--SRKRTNE-WHEVCA 389

Query: 395 NLGSDLKEDGHY-------SFAQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVV 447
           +L   LK++  +       SF ++R  L             C LY  +FP +  +K + +
Sbjct: 390 SLWRRLKDNSIHISTVFDLSFKEMRHEL-----------KLCFLYFSVFPEDYEIKVEKL 438

Query: 448 IRRWLAEGYARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFL 507
           I   +AEG+ + D+    E+  A     +L+DR++++  +     +V +C+ H ++ +  
Sbjct: 439 IHLLVAEGFIQEDEEMMMED-VARCYIDELVDRSLVKA-ERIERGKVMSCRIHDLLRDLA 496

Query: 508 LNKSLAQRFIGTSLHDHPRVGINTSNARHLSVDAAKQ-------TECVASDEELS-RVRS 559
           + K+    F            +N  N +  S D  ++        +    D  ++ R+RS
Sbjct: 497 IKKAKELNF------------VNVYNEKQHSSDICRREVVHHLMNDYYLCDRRVNKRMRS 544

Query: 560 LTIFGDA---GDTISCLRKCKLLRVLDLQE----CNGLNDDHLKHMYELWHLKYLSLGG- 611
               G+    G   +   K KLLRVL+++        +++     + EL HL+YL +   
Sbjct: 545 FLFIGERRGFGYVNTTNLKLKLLRVLNMEGLLFVSKNISNTLPDVIGELIHLRYLGIADT 604

Query: 612 YINELPRSIQGLHCLETLDLRRTEIKFLPIEAIMLPHLAHLFGKFM 657
           Y++ LP SI  L  L+TLD    +      +   L  L H+ GKF+
Sbjct: 605 YVSILPASISNLRFLQTLDASGNDPFQYTTDLSKLTSLRHVIGKFV 650
>AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853
          Length = 852

 Score =  126 bits (316), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 209/459 (45%), Gaps = 46/459 (10%)

Query: 195 QVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMRGILRDVLRQ 254
           Q+ +++ VG GGLGKTT+A+ V++D   + +F  R W++   +      MR ILR++   
Sbjct: 181 QLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNL--- 237

Query: 255 VRPGDA-MDVDGQHLEASLREYLKDKRYLXXXXXXXXXQLRIIESIFPD--NGTGSRIIV 311
              GDA +  D   L   +++YL  KRYL          L   + I+     G G  +IV
Sbjct: 238 ---GDASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRGQGGSVIV 294

Query: 312 TTDNQQVANTCSHGNGYVYQMKTLGKEDSKKLAFSGLRSVEPG--QGP------ASLLAK 363
           TT ++ VA      +   ++ + L  ++S  L  +   +   G  + P        ++ K
Sbjct: 295 TTRSESVAKRVQARDDKTHRPELLSPDNSWLLFCNVAFAANDGTCERPELEDVGKEIVTK 354

Query: 364 CDGLPLALVSVSDYLKSSSEPTGEL--CAELCLN--LGSDLKEDGHYSFAQLRKVLLDNY 419
           C GLPL + +V   L        E    AE   +   G+  + D   S  QL      +Y
Sbjct: 355 CKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQL------SY 408

Query: 420 DSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKNFRKLID 479
           D    +  SC+L L ++P +  + K+ ++  W+ EG+    + R + E + +  F  L +
Sbjct: 409 DELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATE-SGEDCFSGLTN 467

Query: 480 RNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVGINTSNARHLSV 539
           R +I+ VD   +  + TCK H ++ + +++ +    F       +P  G+   N RHL +
Sbjct: 468 RCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSF------SNPE-GL---NCRHLGI 517

Query: 540 DAAKQTECVASDEELSRVRSLTIFGDAGDTISCLRK----CKLLRVLDLQEC--NGLNDD 593
                 + +  + +L  V S T  G+     S L K    CK LRVLD+ +   +    +
Sbjct: 518 SGNFDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFTDCKYLRVLDISKSIFDAPLSE 577

Query: 594 HLKHMYELWHLKYLSLGGY--INELPRSIQGLHCLETLD 630
            L  +  L HL  LSL     + + PRS++ LH L+ LD
Sbjct: 578 ILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILD 616
>AT1G59124.1 | chr1:21816832-21819653 FORWARD LENGTH=856
          Length = 855

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 181/751 (24%), Positives = 317/751 (42%), Gaps = 88/751 (11%)

Query: 17  LFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHARTAVARLHAEEML 76
           L+ +L +E    + +E +V  L+++  M+++ + D       +  H  +AV +   EE+ 
Sbjct: 13  LWNLLSQECELFQGVEDQVTELKRDLNMLSSFLKD-----ANAKKHT-SAVVKNCVEEIK 66

Query: 77  DLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKK----VQSRSSFSEEIQKLRR 132
           ++ +D ED ++ F  +L  +    SG       +K  +++    +  R  ++  I  L  
Sbjct: 67  EIIYDGEDTIETF--VLEQNLGKTSG-------IKKSIRRLACIIPDRRRYALGIGGLSN 117

Query: 133 RLSEAQQRVXXXXXXXXXXXXGF-EPRXXXXTPARAACGPP-----VGIGEPMEELLS-L 185
           R+S+  + +            G+ +P+       R           VG+   +++L+  L
Sbjct: 118 RISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDDDSDFVGLEANVKKLVGYL 177

Query: 186 LDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMR 245
           +DE       V+V+SI G GGLGKTTLAK V++    K +F   +W+         +  +
Sbjct: 178 VDEA-----NVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMNVWQ 232

Query: 246 GILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFPDNG 304
            ILRD+  +      M++    L+  L   L+  + L         +   +I+ IFP   
Sbjct: 233 KILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEKEDWELIKPIFPPT- 291

Query: 305 TGSRIIVTTDNQQVANTCSHGNGYV-YQMKTLGKEDS----KKLAF-----SGLRSVEPG 354
            G ++++T+ N+ VA        Y+ ++ + L  EDS    +++A      +  +  E  
Sbjct: 292 KGWKVLLTSRNESVA--MRRNTSYINFKPECLTTEDSWTLFQRIALPMKDAAEFKIDEEK 349

Query: 355 QGPASLLAK-CDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDL----KEDGHYSFA 409
           +    L+ K C GLPLA+  +   L  + + T      L  N+GS L          +  
Sbjct: 350 EELGKLMIKHCGGLPLAIRVLGGML--AEKYTSHDWRRLSENIGSHLVGGRTNFNDDNNN 407

Query: 410 QLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYT 469
               VL  +++    Y   C LYL  FP +  +K + +   W AEG  +   PR  +  T
Sbjct: 408 TCNNVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEGIFQ---PRHYDGET 464

Query: 470 ----ADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHP 525
                D    +L+ RN++        S  +TC  H +M E  L K+  + F+  +     
Sbjct: 465 IRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLLKAKEENFLQITSSRPS 524

Query: 526 RVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTI--FGDAGDTISCLRKCKLLRVLD 583
              + ++      V     T  V  D    ++R+L +   G      S   + +LLRVLD
Sbjct: 525 TANLQSTVTSRRFVYQYPTTLHVEKDINNPKLRALVVVTLGSWNLAGSSFTRLELLRVLD 584

Query: 584 LQECNGLNDDHLKHMYELWHLKYLSLG-GYINELPRSIQGLHCLETLDL----RRTEIKF 638
           L E           + +L HL+YLSL    +  +P S+  L  L  L+L    R T   F
Sbjct: 585 LIEVKIKGGKLASCIGKLIHLRYLSLEYAEVTHIPYSLGNLKLLIYLNLASFGRST---F 641

Query: 639 LPIEAIMLPHLAHL-----FGKFMLHKDDLKNAKKMSKLQKFFSSNKSNLKTLAG----- 688
           +P   + +  L +L      G+    K +L N  K+  L+  FS+  S+L+ L G     
Sbjct: 642 VPNVLMGMQELRYLALPSDMGRKT--KLELSNLVKLETLEN-FSTENSSLEDLCGMVRLS 698

Query: 689 -----FITEEGKEFLQL-IGHMKKLRKVKIW 713
                 I E   E L   IG +K L K++I+
Sbjct: 699 TLNIKLIEETSLETLAASIGGLKYLEKLEIY 729
>AT1G58807.1 | chr1:21780574-21783793 FORWARD LENGTH=1018
          Length = 1017

 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 181/751 (24%), Positives = 317/751 (42%), Gaps = 88/751 (11%)

Query: 17  LFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHARTAVARLHAEEML 76
           L+ +L +E    + +E +V  L+++  M+++ + D       +  H  +AV +   EE+ 
Sbjct: 13  LWNLLSQECELFQGVEDQVTELKRDLNMLSSFLKD-----ANAKKHT-SAVVKNCVEEIK 66

Query: 77  DLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKK----VQSRSSFSEEIQKLRR 132
           ++ +D ED ++ F  +L  +    SG       +K  +++    +  R  ++  I  L  
Sbjct: 67  EIIYDGEDTIETF--VLEQNLGKTSG-------IKKSIRRLACIIPDRRRYALGIGGLSN 117

Query: 133 RLSEAQQRVXXXXXXXXXXXXGF-EPRXXXXTPARAACGPP-----VGIGEPMEELLS-L 185
           R+S+  + +            G+ +P+       R           VG+   +++L+  L
Sbjct: 118 RISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRQKFSKDDDSDFVGLEANVKKLVGYL 177

Query: 186 LDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMR 245
           +DE       V+V+SI G GGLGKTTLAK V++    K +F   +W+         +  +
Sbjct: 178 VDEA-----NVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMNVWQ 232

Query: 246 GILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFPDNG 304
            ILRD+  +      M++    L+  L   L+  + L         +   +I+ IFP   
Sbjct: 233 KILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEKEDWELIKPIFPPT- 291

Query: 305 TGSRIIVTTDNQQVANTCSHGNGYV-YQMKTLGKEDS----KKLAF-----SGLRSVEPG 354
            G ++++T+ N+ VA        Y+ ++ + L  EDS    +++A      +  +  E  
Sbjct: 292 KGWKVLLTSRNESVA--MRRNTSYINFKPECLTTEDSWTLFQRIALPMKDAAEFKIDEEK 349

Query: 355 QGPASLLAK-CDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDL----KEDGHYSFA 409
           +    L+ K C GLPLA+  +   L  + + T      L  N+GS L          +  
Sbjct: 350 EELGKLMIKHCGGLPLAIRVLGGML--AEKYTSHDWRRLSENIGSHLVGGRTNFNDDNNN 407

Query: 410 QLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYT 469
               VL  +++    Y   C LYL  FP +  +K + +   W AEG  +   PR  +  T
Sbjct: 408 TCNNVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEGIFQ---PRHYDGET 464

Query: 470 ----ADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHP 525
                D    +L+ RN++        S  +TC  H +M E  L K+  + F+  +     
Sbjct: 465 IRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLLKAKEENFLQITSSRPS 524

Query: 526 RVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTI--FGDAGDTISCLRKCKLLRVLD 583
              + ++      V     T  V  D    ++R+L +   G      S   + +LLRVLD
Sbjct: 525 TANLQSTVTSRRFVYQYPTTLHVEKDINNPKLRALVVVTLGSWNLAGSSFTRLELLRVLD 584

Query: 584 LQECNGLNDDHLKHMYELWHLKYLSLG-GYINELPRSIQGLHCLETLDL----RRTEIKF 638
           L E           + +L HL+YLSL    +  +P S+  L  L  L+L    R T   F
Sbjct: 585 LIEVKIKGGKLASCIGKLIHLRYLSLEYAEVTHIPYSLGNLKLLIYLNLASFGRST---F 641

Query: 639 LPIEAIMLPHLAHL-----FGKFMLHKDDLKNAKKMSKLQKFFSSNKSNLKTLAG----- 688
           +P   + +  L +L      G+    K +L N  K+  L+  FS+  S+L+ L G     
Sbjct: 642 VPNVLMGMQELRYLALPSDMGRKT--KLELSNLVKLETLEN-FSTENSSLEDLCGMVRLS 698

Query: 689 -----FITEEGKEFLQL-IGHMKKLRKVKIW 713
                 I E   E L   IG +K L K++I+
Sbjct: 699 TLNIKLIEETSLETLAASIGGLKYLEKLEIY 729
>AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848
          Length = 847

 Score =  115 bits (289), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 154/614 (25%), Positives = 265/614 (43%), Gaps = 66/614 (10%)

Query: 75  MLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKVQSRSSFSEEIQKLRRRL 134
           +LD+ +D+ED +D  T+ L         R  L+ R+ + +   +   +  ++I+ L+RR 
Sbjct: 65  VLDIAYDVEDVLD--TYFLKLEKR--LHRLGLM-RLTNIISDKKDAYNILDDIKTLKRRT 119

Query: 135 SEAQQRVXXXXXXXXXXXXGFEPRXXXXTPARAACGPP----VGIGEPMEELLSLLDEVE 190
            +  +++                        RA         VG+ +  + LL+ L + +
Sbjct: 120 LDVTRKLEMYGIGNFNEHRVVASTSRVREVRRARSDDQEERVVGLTDDAKVLLTKLLDDD 179

Query: 191 GEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMRGILRD 250
           G+  ++ +ISI G  GLGKT+LA+ +++    KE F +R W    G   T D +  I+  
Sbjct: 180 GD-NKIYMISIFGMEGLGKTSLARKLFNSSDVKESFEYRVWTNVSGECNTRDILMRIISS 238

Query: 251 VLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFPDNGTGSRI 309
            L +   G+   +  Q LE  L + L++KRYL         + L  ++   P +  GSR+
Sbjct: 239 -LEETSEGELEKMAQQELEVYLHDILQEKRYLVVVDDIWESEALESLKRALPCSYQGSRV 297

Query: 310 IVTTDNQQVANTCSHGNGYVYQMKTLGKEDS----KKLAFSGLRSV--EPGQGPASLLAK 363
           I+TT  + VA        Y + ++ L  ++S    +K AF  +  V  E  +    ++ K
Sbjct: 298 IITTSIRVVAEG-RDKRVYTHNIRFLTFKESWNLFEKKAFRYILKVDQELQKIGKEMVQK 356

Query: 364 CDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKVLLDNYDSFS 423
           C GLP   V ++  L S  +P          N  +D+       ++ LR V  DN    S
Sbjct: 357 CGGLPRTTVVLAG-LMSRKKP----------NEWNDV-------WSSLR-VKDDNIHVSS 397

Query: 424 GYTLS----------CLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKN 473
            + LS          C LYL +FP +  +  + +I+  +AEG+ + D+    E+  A   
Sbjct: 398 LFDLSFKDMGHELKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFIQEDEEMTMED-VARYY 456

Query: 474 FRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVGINTSN 533
              L+  ++++ V  R   ++ + + H ++ EF + KS    F+      H         
Sbjct: 457 IEDLVYISLVEVV-KRKKGKLMSFRIHDLVREFTIKKSKELNFVNVYDEQHSSTTSRREV 515

Query: 534 ARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTISCLR----KCKLLRVLDLQE--- 586
             HL  D       V      +++RS   FG   + I+ +     K KLLRVL+L     
Sbjct: 516 VHHLMDDNYLCDRRVN-----TQMRSFLFFGKRRNDITYVETITLKLKLLRVLNLGGLHF 570

Query: 587 -CNGLNDDHLKHMY-ELWHLKYLSLGG-YINELPRSIQGLHCLETLDLRRTEIKFLPIEA 643
            C G +   L  +   L HL+YL +    +N LP  I  L  L+TLD      + +  + 
Sbjct: 571 ICQGYSPWSLPDVIGGLVHLRYLGIADTVVNNLPDFISNLRFLQTLDASGNSFERMT-DL 629

Query: 644 IMLPHLAHLFGKFM 657
             L  L HL G+F+
Sbjct: 630 SNLTSLRHLTGRFI 643
>AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907
          Length = 906

 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 174/748 (23%), Positives = 316/748 (42%), Gaps = 97/748 (12%)

Query: 16  KLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHART-AVARLHAEE 74
           KL+ +L +EY + + +E+++  L+ + +M+ A + D       +DA  +T A+AR   EE
Sbjct: 17  KLWKLLSQEYERFQGVEEQITELRDDLKMLMAFLSD-------ADAKKQTRALARNCLEE 69

Query: 75  MLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKVQSRSSFSEEIQKLRRRL 134
           + ++ +D ED ++ F  LL  S        SL C           R   + +I  + +R+
Sbjct: 70  IKEITYDAEDIIEIF--LLKGS----VNMRSLACFPG-------GRREIALQITSISKRI 116

Query: 135 SEAQQRVXXXXXXXXXXXXGFEP-------RXXXXTPARAACGPPVGIGEPMEELLSLLD 187
           S+  Q V            G +        R    T +  +    VG+ + +E+L+   +
Sbjct: 117 SKVIQ-VMQNLGIKSDIMDGVDSHAQLERKRELRHTFSSESESNLVGLEKNVEKLV---E 172

Query: 188 EVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMRGI 247
           E+ G  +    +SI G GGLGKTTLA+ ++D  + K  F   AW+         D  + I
Sbjct: 173 ELVGN-DSSHGVSITGLGGLGKTTLARQIFDHDKVKSHFDGLAWVCVSQEFTRKDVWKTI 231

Query: 248 LRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFPDNGTG 306
           L ++  + +  D  + D   ++  L + L+ K+ L         +    I  +FP+   G
Sbjct: 232 LGNLSPKYKDSDLPEDD---IQKKLFQLLETKKALIVFDDLWKREDWYRIAPMFPERKAG 288

Query: 307 SRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDSKKL----AFSGLRSV-------EPGQ 355
            ++++T+ N  +     H +   ++ + L  ++  KL    AFS  +++       E  +
Sbjct: 289 WKVLLTSRNDAI-----HPHCVTFKPELLTHDECWKLLQRIAFSKQKTITGYIIDKEMVK 343

Query: 356 GPASLLAKCDGLPLA------LVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFA 409
               +   C  LPLA      L+     L+     +  + + + +   S  + D     +
Sbjct: 344 MAKEMTKHCKRLPLAVKLLGGLLDAKHTLRQWKLISENIISHIVVGGTSSNENDS----S 399

Query: 410 QLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYT 469
            +  VL  +++   GY   CLLYL  +P +  ++ + +   W AEG      P   E  T
Sbjct: 400 SVNHVLSLSFEGLPGYLKHCLLYLASYPEDHEIEIERLSYVWAAEGITY---PGNYEGAT 456

Query: 470 ----ADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHP 525
               AD    +L+ RN++        S  + C+ H +M E  L K+  + F+        
Sbjct: 457 IRDVADLYIEELVKRNMVISERDALTSRFEKCQLHDLMREICLLKAKEENFLQIVTDPTS 516

Query: 526 RVGINTSNARHLSVDAAKQTECVASDEEL--SRVRSLTIFGDAG----DTISCLRKCKLL 579
              +++  +          T   + + ++  S++RSL +F   G       S   +  LL
Sbjct: 517 SSSVHSLASSRSRRLVVYNTSIFSGENDMKNSKLRSL-LFIPVGYSRFSMGSNFIELPLL 575

Query: 580 RVLDLQECNGLNDDHLKHMYELWHLKYLSL-GGYINELPRSIQGLHCLETLDLRRTEIKF 638
           RVLDL             + +L HLKYLSL    +  LP S++ L  L  L+LR    + 
Sbjct: 576 RVLDLDGAKFKGGKLPSSIGKLIHLKYLSLYQASVTYLPSSLRNLKSLLYLNLRINSGQL 635

Query: 639 LPI-----EAIMLPHLAHLFGKFMLHKDDLKNAKKMSKLQKFFSSNKS--------NLKT 685
           + +     E + L +L+  + +  L K +L N  K+  L  F + + S         L+T
Sbjct: 636 INVPNVFKEMLELRYLSLPWERSSLTKLELGNLLKLETLINFSTKDSSVTDLHRMTKLRT 695

Query: 686 LAGFITEEGKEF------LQLIGHMKKL 707
           L   I+ EG         L ++GH++ L
Sbjct: 696 LQILISGEGLHMETLSSALSMLGHLEDL 723
>AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858
          Length = 857

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 133/508 (26%), Positives = 230/508 (45%), Gaps = 64/508 (12%)

Query: 173 VGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWI 232
           VG+ + +E+L++  D V G  E++RV SI G GGLGKTTLAK ++   + +  F   AW+
Sbjct: 165 VGLEQSLEKLVN--DLVSG-GEKLRVTSICGMGGLGKTTLAKQIFHHHKVRRHFDRFAWV 221

Query: 233 AAVGSPETSDWMRGILRDVLRQVRPGD----AMDVDGQHLEASLREYLK-DKRYLXXXXX 287
                       R + +D+   +   D     + +  + L   L  +LK +K  +     
Sbjct: 222 YVSQDCRR----RHVWQDIFLNLSYKDENQRILSLRDEQLGEELHRFLKRNKCLIVLDDI 277

Query: 288 XXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDS----KKL 343
                   ++ +FP   TGS II+TT N++VA   +   G +++ + L  E+S    +K+
Sbjct: 278 WGKDAWDCLKHVFPHE-TGSEIILTTRNKEVA-LYADPRGVLHEPQLLTCEESWELLEKI 335

Query: 344 AFSGLRSVEP------GQGPASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLG 397
           + SG  ++EP       +    ++ +C GLPLA+  +   L + S  T      +C N+ 
Sbjct: 336 SLSGRENIEPMLVKKMEEIGKQIVVRCGGLPLAITVLGGLLATKS--TWNEWQRVCENIK 393

Query: 398 SDLKEDGHYSFAQ---LRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAE 454
           S +   G  + ++   +  VL  +Y+    +   C LY   +P +  +    ++   +AE
Sbjct: 394 SYVSNGGSSNGSKNMLVADVLCLSYEYLPPHVKQCFLYFAHYPEDYEVHVGTLVSYCIAE 453

Query: 455 GY---ARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRN--NSEVKTCKTHGIMHEFLLN 509
           G     +  +   + E        +L+ R+++  V  R+   SEV TC+ H +M E  L 
Sbjct: 454 GMVMPVKHTEAGTTVEDVGQDYLEELVKRSMVM-VGRRDIVTSEVMTCRMHDLMREVCLQ 512

Query: 510 KSLAQRF---IGTSLHDHPR--VGINTSNARHLSVDAAKQTECVASDEELSRVRSLTIFG 564
           K+  + F   I +   D     + ++T+ +R +SV        +    E   ++SL+   
Sbjct: 513 KAKQESFVQVIDSRDQDEAEAFISLSTNTSRRISVQ-------LHGGAEEHHIKSLSQVS 565

Query: 565 DAGDTISCLRKCKLLRVLDLQ----ECNGLNDDHLKHMYELWHLKYLSLG-GYINELPRS 619
                    RK KLLRVLDL+    E   L DD    + +L HL+ LS+    + EL  S
Sbjct: 566 --------FRKMKLLRVLDLEGAQIEGGKLPDD----VGDLIHLRNLSVRLTNVKELTSS 613

Query: 620 IQGLHCLETLDLRRTEIKFLPIEAIMLP 647
           I  L  + TLDL      ++P +    P
Sbjct: 614 IGNLKLMITLDLFVKGQLYIPNQLWDFP 641
>AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902
          Length = 901

 Score =  114 bits (284), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 145/663 (21%), Positives = 280/663 (42%), Gaps = 98/663 (14%)

Query: 16  KLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHARTAVARLHAEEM 75
           KL+ +L++E  +   ++++V  L+++ R + + + D       +  H    V R   E++
Sbjct: 12  KLWALLNRESERLNGIDEQVDGLKRQLRGLQSLLKD-----ADAKKHGSDRV-RNFLEDV 65

Query: 76  LDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKV----QSRSSFSEEIQKLR 131
            DL  D ED ++  +++L        G       VK+ V+++      R   + +I+ + 
Sbjct: 66  KDLVFDAEDIIE--SYVLNKLRGEGKG-------VKNHVRRLACFLTDRHKVASDIEGIT 116

Query: 132 RRLSEAQQRVXXXXXXXXXXXXGFE------PRXXXXTPARAACGPPVGIGEPMEELLSL 185
           +R+S+    +            G         R    T   ++    VG+ + +EEL+  
Sbjct: 117 KRISKVIGEMQSLGIQQQIIDGGRSLSLQDIQREIRQTFPNSSESDLVGVEQSVEELVGP 176

Query: 186 LDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGS-PETSDWM 244
           + E++     ++V+SI G GG+GKTTLA+ ++     +  F   AW+       +   W 
Sbjct: 177 MVEIDN----IQVVSISGMGGIGKTTLARQIFHHDLVRRHFDGFAWVCVSQQFTQKHVWQ 232

Query: 245 RGILRDVLRQVRP--GDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFP 301
           R     +L+++RP  G+ + +D   ++  L + L+  RYL         +    I+ +FP
Sbjct: 233 R-----ILQELRPHDGEILQMDEYTIQGKLFQLLETGRYLVVLDDVWKEEDWDRIKEVFP 287

Query: 302 DNGTGSRIIVTTDNQQVA----NTCSHGNGYVYQMKTLGKEDSKKLAFSGLRSVEPGQGP 357
               G ++++T+ N+ V      TC       ++ + L  ++S KL       + P +  
Sbjct: 288 -RKRGWKMLLTSRNEGVGLHADPTC-----LSFRARILNPKESWKL----FERIVPRRNE 337

Query: 358 A----------SLLAKCDGLPLALV----------SVSDYLKSSSEPTGELCAELCLNLG 397
                       ++  C GLPLA+           + S++ + S     ++  + CL+  
Sbjct: 338 TEYEEMEAIGKEMVTYCGGLPLAVKVLGGLLANKHTASEWKRVSENIGAQIVGKSCLD-- 395

Query: 398 SDLKEDGHYSFAQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEG-Y 456
                    S   + ++L  +Y+        C LYL  FP +  +K + +   W AEG Y
Sbjct: 396 -------DNSLNSVYRILSLSYEDLPTDLKHCFLYLAHFPEDYKIKTRTLYSYWAAEGIY 448

Query: 457 ARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRF 516
                    E+Y       +L+ RN++    +  +  +K C+ H +M E  ++K+  + F
Sbjct: 449 DGLTILDSGEDY-----LEELVRRNLVIAEKSNLSWRLKLCQMHDMMREVCISKAKVENF 503

Query: 517 ---IGTSLHDHPRVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGD----T 569
              I         +  + S +R L+V + K    +   +   +VRSL + G   D    +
Sbjct: 504 LQIIKVPTSTSTIIAQSPSRSRRLTVHSGKAFHILGHKK---KVRSLLVLGLKEDLWIQS 560

Query: 570 ISCLRKCKLLRVLDLQECNGLNDDHLKHMYELWHLKYLSL-GGYINELPRSIQGLHCLET 628
            S  +   LLRVLDL             +  L HL++LSL    ++ LP +I+ L  +  
Sbjct: 561 ASRFQSLPLLRVLDLSSVKFEGGKLPSSIGGLIHLRFLSLHQAVVSHLPSTIRNLKLMLY 620

Query: 629 LDL 631
           L+L
Sbjct: 621 LNL 623
>AT1G58602.1 | chr1:21760167-21763765 FORWARD LENGTH=1139
          Length = 1138

 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 172/750 (22%), Positives = 305/750 (40%), Gaps = 76/750 (10%)

Query: 14  MGKLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHART-AVARLHA 72
           + KL+ +L  EY   + +E +VA L+ +  ++ + + D       +DA   T A+ R   
Sbjct: 10  VNKLWDLLSHEYTLFQGVEDQVAELKSDLNLLKSFLKD-------ADAKKHTSALVRYCV 62

Query: 73  EEMLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCR-VKHEVKKVQSRSSFSEEIQKLR 131
           EE+ D+ +D ED ++ F            G TS + + +K     V  R   +  I  + 
Sbjct: 63  EEIKDIVYDAEDVLETFVQ------KEKLGTTSGIRKHIKRLTCIVPDRREIALYIGHVS 116

Query: 132 RRLSEAQQRVXXXXXXXXXXXXGFEP-----RXXXXTPARAACGPPVGIGEPMEELLSLL 186
           +R++   + +               P     R    T  +      V + E +++L+   
Sbjct: 117 KRITRVIRDMQSFGVQQMIVDDYMHPLRNREREIRRTFPKDNESGFVALEENVKKLVGYF 176

Query: 187 DEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMRG 246
                E +  +V+SI G GGLGKTTLA+ V++     +KF   AW++        +  + 
Sbjct: 177 ----VEEDNYQVVSITGMGGLGKTTLARQVFNHDMVTKKFDKLAWVSVSQDFTLKNVWQN 232

Query: 247 ILRDVLRQVRPGDA-----MDVDGQHLEASLREYLK-DKRYLXXXXXXXXXQLRIIESIF 300
           IL D+  +           +++    L+  L + L+  K  +            +I+ IF
Sbjct: 233 ILGDLKPKEEETKEEEKKILEMTEYTLQRELYQLLEMSKSLIVLDDIWKKEDWEVIKPIF 292

Query: 301 PDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDSKKL----AF-----SGLRSV 351
           P    G ++++T+ N+ +    ++   + ++ + L  +DS KL    AF     S     
Sbjct: 293 PPT-KGWKLLLTSRNESIV-APTNTKYFNFKPECLKTDDSWKLFQRIAFPINDASEFEID 350

Query: 352 EPGQGPA-SLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSF-- 408
           E  +     ++  C GLPLA+  +   L  + + T      L  N+GS L   G  +F  
Sbjct: 351 EEMEKLGEKMIEHCGGLPLAIKVLGGML--AEKYTSHDWRRLSENIGSHLV-GGRTNFND 407

Query: 409 ---AQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRS 465
                   VL  +++    Y   C LYL  FP +  +K + +   W AE   +   PR  
Sbjct: 408 DNNNSCNYVLSLSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEEIFQ---PRHY 464

Query: 466 E----EYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSL 521
           +        D    +L+ RN++        S  +TC  H +M E  L K+  + F+  + 
Sbjct: 465 DGEIIRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLLKAKEENFLQITS 524

Query: 522 HDHPRVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTI--FGDAGDTISCLRKCKLL 579
           +        ++      V     T  V  D    ++RSL +   G      S   + +LL
Sbjct: 525 NPPSTANFQSTVTSRRLVYQYPTTLHVEKDINNPKLRSLVVVTLGSWNMAGSSFTRLELL 584

Query: 580 RVLDLQECNGLNDDHLKHMYELWHLKYLSLG-GYINELPRSIQGLHCLETLDLR---RTE 635
           RVLDL +           + +L HL+YLSL    +  +P S+  L  L  L+L     + 
Sbjct: 585 RVLDLVQAKLKGGKLASCIGKLIHLRYLSLEYAEVTHIPYSLGNLKLLIYLNLHISLSSR 644

Query: 636 IKFLPIEAIMLPHLAHLFGKFMLHKD---DLKNAKKMSKLQKFFSSNKS--------NLK 684
             F+P   + +  L +L    ++ +    +L N  K+  L+ F + N S         L+
Sbjct: 645 SNFVPNVLMGMQELRYLALPSLIERKTKLELSNLVKLETLENFSTKNSSLEDLRGMVRLR 704

Query: 685 TLAGFITEEG--KEFLQLIGHMKKLRKVKI 712
           TL   + EE   +     IG +K L K++I
Sbjct: 705 TLTIELIEETSLETLAASIGGLKYLEKLEI 734
>AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928
          Length = 927

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 152/648 (23%), Positives = 275/648 (42%), Gaps = 86/648 (13%)

Query: 16  KLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHAR-TAVARLHAEE 74
           KL+ +L +E  +   ++++V  L+++   + + + D       +DA    T   R   E+
Sbjct: 12  KLWELLSRESARLNGIDEQVDGLKRQLGRLQSLLKD-------ADAKKNETERVRNFLED 64

Query: 75  MLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKVQ----SRSSFSEEIQKL 130
           + D+ +D +D ++ F  LL        G       +K +V+ +      R  F+ +I+ +
Sbjct: 65  VKDIVYDADDIIESF--LLNELRGKEKG-------IKKQVRTLACFLVDRRKFASDIEGI 115

Query: 131 RRRLSEAQQRVXXXXXXXXXXXXGF------EPRXXXXTPARAACGPPVGIGEPMEELLS 184
            +R+SE    +            G         R    T +R +    VG+ + +EEL+ 
Sbjct: 116 TKRISEVIVGMQSLGIQHIADGGGRSLSLQERQREIRQTFSRNSESDLVGLDQSVEELVD 175

Query: 185 LLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSD-W 243
            L     E + V+V+S+ G GG+GKTTLA+ V+     +  F   +W+         D W
Sbjct: 176 HL----VENDSVQVVSVSGMGGIGKTTLARQVFHHDIVRRHFDGFSWVCVSQQFTRKDVW 231

Query: 244 MRGILRDVLRQVRPGD--AMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIF 300
            R     +L+ +RP D   + +D   L+  L E L+  RYL         +    I+++F
Sbjct: 232 QR-----ILQDLRPYDEGIIQMDEYTLQGELFELLESGRYLLVLDDVWKEEDWDRIKAVF 286

Query: 301 PDNGTGSRIIVTTDNQQVA----NTCSHGNGYVYQMKTLGKEDSKKLAFSGLRS------ 350
           P +  G ++++T+ N+ +      TC     + ++ + L  E S KL F  + S      
Sbjct: 287 P-HKRGWKMLLTSRNEGLGLHADPTC-----FAFRPRILTPEQSWKL-FERIVSSRRDKT 339

Query: 351 ---VEPGQGPASLLAKCDGLPLALVSVSDYL--KSSSEPTGELCAELCLNL--GSDLKED 403
              V+   G   ++  C GLPLA+  +   L  K +      + + +  ++   S L +D
Sbjct: 340 EFKVDEAMG-KEMVTYCGGLPLAVKVLGGLLAKKHTVLEWKRVHSNIVTHIVGKSGLSDD 398

Query: 404 GHYSFAQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPR 463
              S   + +VL  +Y+        C  YL  FP +  +  K++   W+AEG        
Sbjct: 399 NSNS---VYRVLSLSYEDLPMQLKHCFFYLAHFPEDYKIDVKILFNYWVAEGIITPFHDG 455

Query: 464 RSEEYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHD 523
            + + T +    +L+ RN++   ++   S ++ C+ H +M E  L+K+  + FI   +  
Sbjct: 456 STIQDTGESYLEELVRRNMVVVEESYLTSRIEYCQMHDMMREVCLSKAKEENFI--RVVK 513

Query: 524 HPRVGINTSNA------RHLSVDAAKQTECVASDEELSRVRSLTIFGDAGD-----TISC 572
            P     T NA      R L + +      +   +   + RS+ IFG            C
Sbjct: 514 VPTTTSTTINAQSPCRSRRLVLHSGNALHMLGHKDN-KKARSVLIFGVEEKFWKPRGFQC 572

Query: 573 LRKCKLLRVLDLQECNGLNDDHLKHMYELWHLKYLSL-GGYINELPRS 619
           L    LLRVLDL             + +L HL++LSL    ++ LP S
Sbjct: 573 L---PLLRVLDLSYVQFEGGKLPSSIGDLIHLRFLSLYEAGVSHLPSS 617
>AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909
          Length = 908

 Score =  107 bits (266), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 174/730 (23%), Positives = 309/730 (42%), Gaps = 97/730 (13%)

Query: 9   FLEAVMGKLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHARTAVA 68
           F+   + KL+ +L +E  + + ++ ++  L+++ R + + + D       +  H    V 
Sbjct: 5   FVSFGLEKLWDLLSRESERLQGIDGQLDGLKRQLRSLQSLLKD-----ADAKKHGSDRV- 58

Query: 69  RLHAEEMLDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKKV----QSRSSFS 124
           R   E++ DL  D ED ++ +        +  SG+      VK  V+++      R   +
Sbjct: 59  RNFLEDVKDLVFDAEDIIESYVL------NKLSGKGK---GVKKHVRRLACFLTDRHKVA 109

Query: 125 EEIQKLRRRLSE--------AQQRVXXXXXXXXXXXXGFEPRXXXXTPARAACGPPVGIG 176
            +I+ + +R+SE          Q++                R    T   ++    VG+ 
Sbjct: 110 SDIEGITKRISEVIGEMQSFGIQQIIDGGRSLSLQERQRVQREIRQTYPDSSESDLVGVE 169

Query: 177 EPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVG 236
           + ++EL+  L  VE +  QV  +SI G GG+GKTTLA+ V+     +  F   AW+    
Sbjct: 170 QSVKELVGHL--VENDVHQV--VSIAGMGGIGKTTLARQVFHHDLVRRHFDGFAWVCVSQ 225

Query: 237 S-PETSDWMRGILRDVLRQVRP--GDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ- 292
              +   W R     +L++++P  GD + +D   L+  L + L+  RYL         + 
Sbjct: 226 QFTQKHVWQR-----ILQELQPHDGDILQMDEYALQRKLFQLLEAGRYLVVLDDVWKKED 280

Query: 293 LRIIESIFPDNGTGSRIIVTTDNQQVA----NTCSHGNGYVYQMKTLGKEDSKKLAFSGL 348
             +I+++FP    G ++++T+ N+ V      TC       ++   L  E+S KL     
Sbjct: 281 WDVIKAVFP-RKRGWKMLLTSRNEGVGIHADPTC-----LTFRASILNPEESWKLC---E 331

Query: 349 RSVEPGQGPA-------------SLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLN 395
           R V P +                 ++  C GLPLA+ ++   L  +++ T      +  N
Sbjct: 332 RIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLL--ANKHTVPEWKRVFDN 389

Query: 396 LGSDLKEDGHY----SFAQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRW 451
           +GS +   G +    S   + ++L  +Y+    +   C L L  FP +  +    +   W
Sbjct: 390 IGSQIV-GGSWLDDNSLNSVYRILSLSYEDLPTHLKHCFLNLAHFPEDSEISTYSLFYYW 448

Query: 452 LAEGYARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKS 511
            AEG         S EY  +    +L+ RN++   D   + + K C+ H +M E  L+K+
Sbjct: 449 AAEGIYDGSTIEDSGEYYLE----ELVRRNLVIADDNYLSWQSKYCQMHDMMREVCLSKA 504

Query: 512 LAQRFIGTSLHDHPRVGINT---SNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGD 568
             + F+   +       IN    S +R LS+ + K    +    + ++VRSL +     D
Sbjct: 505 KEENFLQIIIDPTCTSTINAQSPSRSRRLSIHSGKAFHILGHKNK-TKVRSLIVPRFEED 563

Query: 569 ----TISCLRKCKLLRVLDLQECNGLNDDHLKHMYELWHLKYLSL-GGYINELPRSIQGL 623
               + S      LLRVLDL             +  L HL+YLSL    ++ LP +++ L
Sbjct: 564 YWIRSASVFHNLTLLRVLDLSWVKFEGGKLPCSIGGLIHLRYLSLYEAKVSHLPSTMRNL 623

Query: 624 HCLETLDLR-RTEIKFLPIEAIMLPHLAHLFGKFMLHKDDLKNAKKMSKLQKFFSSNKSN 682
             L  L+LR  TE      E I +P++     K M+    L    KM    K    +  N
Sbjct: 624 KLLLYLNLRVDTE------EPIHVPNVL----KEMIQLRYLSLPLKMDDKTKLELGDLVN 673

Query: 683 LKTLAGFITE 692
           L+ L GF T+
Sbjct: 674 LEYLYGFSTQ 683
>AT1G59218.1 | chr1:21828398-21831713 FORWARD LENGTH=1050
          Length = 1049

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 169/725 (23%), Positives = 301/725 (41%), Gaps = 94/725 (12%)

Query: 17  LFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHART-AVARLHAEEM 75
           L+ +L +E    + +E +V  L+++  ++++ + D       +DA   T AV +   EE+
Sbjct: 13  LWNLLSQECELFQGVEDQVTELKRDLNLLSSFLKD-------ADAKKHTSAVVKNCVEEI 65

Query: 76  LDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKK----VQSRSSFSEEIQKLR 131
            ++ +D ED ++ F            G+TS    +K  +++    +  R  ++  I  L 
Sbjct: 66  KEIIYDGEDTIETFVL------EQNLGKTS---GIKKSIRRLACIIPDRRRYALGIGGLS 116

Query: 132 RRLSEAQQRVXXXXXXXXXXXXGF-EPRXXXXTPARAACGPP-----VGIGEPMEELLS- 184
            R+S+  + +            G+ +P+       R           VG+   +++L+  
Sbjct: 117 NRISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKDDDSDFVGLEANVKKLVGY 176

Query: 185 LLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWM 244
           L+DE       V+V+SI G GGLGKTTLAK V++    K +F   +W+         +  
Sbjct: 177 LVDEA-----NVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMNVW 231

Query: 245 RGILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFPDN 303
           + ILRD+  +      M++    L+  L   L+  + L         +   +I+ IFP  
Sbjct: 232 QKILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEKEDWELIKPIFPPT 291

Query: 304 GTGSRIIVTTDNQQVANTCSHGNGYV-YQMKTLGKEDS----KKLAF-----SGLRSVEP 353
             G ++++T+ N+ VA        Y+ ++ + L  EDS    +++A      +  +  E 
Sbjct: 292 -KGWKVLLTSRNESVA--MRRNTSYINFKPECLTTEDSWTLFQRIALPMKDAAEFKIDEE 348

Query: 354 GQGPASLLAK-CDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDL----KEDGHYSF 408
            +    L+ K C GLPLA+  +   L  + + T      L  N+GS L          + 
Sbjct: 349 KEELGKLMIKHCGGLPLAIRVLGGML--AEKYTSHDWRRLSENIGSHLVGGRTNFNDDNN 406

Query: 409 AQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSE-- 466
                VL  +++    Y   C LYL  FP++  +  K +   W AEG  +   PR  +  
Sbjct: 407 NTCNYVLSLSFEELPSYLKHCFLYLAHFPDDYEINVKNLSYYWAAEGIFQ---PRHYDGE 463

Query: 467 --EYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDH 524
                 D    +L+ RN++        S  +TC  H +M E  L K+  + F+  +    
Sbjct: 464 IIRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLLKAKEENFLQIT---- 519

Query: 525 PRVGINTSNARHLSVDAAKQ-------TECVASDEELSRVRSLTIFGD-----AGDTI-- 570
                 TS    LS+  +++       T  V  D    ++RSL +  +      G +   
Sbjct: 520 ---SSRTSTGNSLSIVTSRRLVYQYPITLDVEKDINDPKLRSLVVVANTYMFWGGWSWML 576

Query: 571 --SCLRKCKLLRVLDLQECNGLNDDHLKHMYELWHLKYLSLG-GYINELPRSIQGLHCLE 627
             S   + +LLRVLD+             + +L HL+YL+L    +  +P S+  L  L 
Sbjct: 577 LGSSFIRLELLRVLDIHRAKLKGGKLASSIGQLIHLRYLNLKHAEVTHIPYSLGNLKLLI 636

Query: 628 TLDLRRTEIKFLPIEAIMLPHLAHLFGKFMLHKDDLKNAKKMSKLQKFFSSNKSNLKTLA 687
            L+L       L   + ++P++     K M     L   K M +  K   SN   L+TL 
Sbjct: 637 YLNL-----VILVSGSTLVPNVL----KEMQQLRYLALPKDMGRKTKLELSNLVKLETLK 687

Query: 688 GFITE 692
            F T+
Sbjct: 688 NFSTK 692
>AT1G58848.1 | chr1:21792140-21795455 FORWARD LENGTH=1050
          Length = 1049

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 169/725 (23%), Positives = 301/725 (41%), Gaps = 94/725 (12%)

Query: 17  LFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHART-AVARLHAEEM 75
           L+ +L +E    + +E +V  L+++  ++++ + D       +DA   T AV +   EE+
Sbjct: 13  LWNLLSQECELFQGVEDQVTELKRDLNLLSSFLKD-------ADAKKHTSAVVKNCVEEI 65

Query: 76  LDLEHDIEDCVDRFTHLLTCSHSNPSGRTSLVCRVKHEVKK----VQSRSSFSEEIQKLR 131
            ++ +D ED ++ F            G+TS    +K  +++    +  R  ++  I  L 
Sbjct: 66  KEIIYDGEDTIETFVL------EQNLGKTS---GIKKSIRRLACIIPDRRRYALGIGGLS 116

Query: 132 RRLSEAQQRVXXXXXXXXXXXXGF-EPRXXXXTPARAACGPP-----VGIGEPMEELLS- 184
            R+S+  + +            G+ +P+       R           VG+   +++L+  
Sbjct: 117 NRISKVIRDMQSFGVQQAIVDGGYKQPQGDKQREMRPRFSKDDDSDFVGLEANVKKLVGY 176

Query: 185 LLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWM 244
           L+DE       V+V+SI G GGLGKTTLAK V++    K +F   +W+         +  
Sbjct: 177 LVDEA-----NVQVVSITGMGGLGKTTLAKQVFNHEDVKHQFDGLSWVCVSQDFTRMNVW 231

Query: 245 RGILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIFPDN 303
           + ILRD+  +      M++    L+  L   L+  + L         +   +I+ IFP  
Sbjct: 232 QKILRDLKPKEEEKKIMEMTQDTLQGELIRLLETSKSLIVLDDIWEKEDWELIKPIFPPT 291

Query: 304 GTGSRIIVTTDNQQVANTCSHGNGYV-YQMKTLGKEDS----KKLAF-----SGLRSVEP 353
             G ++++T+ N+ VA        Y+ ++ + L  EDS    +++A      +  +  E 
Sbjct: 292 -KGWKVLLTSRNESVA--MRRNTSYINFKPECLTTEDSWTLFQRIALPMKDAAEFKIDEE 348

Query: 354 GQGPASLLAK-CDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDL----KEDGHYSF 408
            +    L+ K C GLPLA+  +   L  + + T      L  N+GS L          + 
Sbjct: 349 KEELGKLMIKHCGGLPLAIRVLGGML--AEKYTSHDWRRLSENIGSHLVGGRTNFNDDNN 406

Query: 409 AQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSE-- 466
                VL  +++    Y   C LYL  FP++  +  K +   W AEG  +   PR  +  
Sbjct: 407 NTCNYVLSLSFEELPSYLKHCFLYLAHFPDDYEINVKNLSYYWAAEGIFQ---PRHYDGE 463

Query: 467 --EYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDH 524
                 D    +L+ RN++        S  +TC  H +M E  L K+  + F+  +    
Sbjct: 464 IIRDVGDVYIEELVRRNMVISERDVKTSRFETCHLHDMMREVCLLKAKEENFLQIT---- 519

Query: 525 PRVGINTSNARHLSVDAAKQ-------TECVASDEELSRVRSLTIFGD-----AGDTI-- 570
                 TS    LS+  +++       T  V  D    ++RSL +  +      G +   
Sbjct: 520 ---SSRTSTGNSLSIVTSRRLVYQYPITLDVEKDINDPKLRSLVVVANTYMFWGGWSWML 576

Query: 571 --SCLRKCKLLRVLDLQECNGLNDDHLKHMYELWHLKYLSLG-GYINELPRSIQGLHCLE 627
             S   + +LLRVLD+             + +L HL+YL+L    +  +P S+  L  L 
Sbjct: 577 LGSSFIRLELLRVLDIHRAKLKGGKLASSIGQLIHLRYLNLKHAEVTHIPYSLGNLKLLI 636

Query: 628 TLDLRRTEIKFLPIEAIMLPHLAHLFGKFMLHKDDLKNAKKMSKLQKFFSSNKSNLKTLA 687
            L+L       L   + ++P++     K M     L   K M +  K   SN   L+TL 
Sbjct: 637 YLNL-----VILVSGSTLVPNVL----KEMQQLRYLALPKDMGRKTKLELSNLVKLETLK 687

Query: 688 GFITE 692
            F T+
Sbjct: 688 NFSTK 692
>AT5G48620.1 | chr5:19717406-19720932 FORWARD LENGTH=909
          Length = 908

 Score =  106 bits (265), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 151/663 (22%), Positives = 276/663 (41%), Gaps = 96/663 (14%)

Query: 9   FLEAVMGKLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHARTAVA 68
           F+   + KL+ +L +E  + + +++++  L+++ R + + + D       +  H    V 
Sbjct: 5   FVSFGLEKLWDLLSRESERLQGIDEQLDGLKRQLRSLQSLLKD-----ADAKKHGSDRV- 58

Query: 69  RLHAEEMLDLEHDIEDCVD-------------------RFTHLLTCSHSNPSGRTSLVCR 109
           R   E++ DL  D ED ++                   R    LT  H   S    +  R
Sbjct: 59  RNFLEDVKDLVFDAEDIIESYVLNKLRGEGKGVKKHVRRLARFLTDRHKVASDIEGITKR 118

Query: 110 VKHEVKKVQSRSSFSEEIQKLRRRLSEAQQRVXXXXXXXXXXXXGFEPRXXXXTPARAAC 169
           +   + ++QS     + I  +R    + +QRV                R    T   ++ 
Sbjct: 119 ISDVIGEMQS-FGIQQIIDGVRSLSLQERQRVQ---------------REIRQTYPDSSE 162

Query: 170 GPPVGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHR 229
              VG+ + +EEL+  L  VE +  QV  +SI G GG+GKTTLA+ V+     +  F   
Sbjct: 163 SDLVGVEQSVEELVGHL--VENDIYQV--VSIAGMGGIGKTTLARQVFHHDLVRRHFDGF 218

Query: 230 AWIAAVGSPETSDWMRGILRDVLRQVRP--GDAMDVDGQHLEASLREYLKDKRYLXXXXX 287
           AW+    S + +  ++ + + +L++++P  G+ + +D   L+  L + L+  RYL     
Sbjct: 219 AWVCV--SQQFT--LKHVWQRILQELQPHDGNILQMDESALQPKLFQLLETGRYLLVLDD 274

Query: 288 XXXXQ-LRIIESIFPDNGTGSRIIVTTDNQQVA----NTCSHGNGYVYQMKTLGKEDSKK 342
               +    I+++FP    G ++++T+ N+ V      TC       ++   L  E+S K
Sbjct: 275 VWKKEDWDRIKAVFP-RKRGWKMLLTSRNEGVGIHADPTC-----LTFRASILNPEESWK 328

Query: 343 LAFSGLRSVEPGQGPA-------------SLLAKCDGLPLALVSVSDYLKSSSEPTGELC 389
           L     R V P +                 ++  C GLPLA+ ++   L  +++ T    
Sbjct: 329 LC---ERIVFPRRDETEVRLDEEMEAMGKEMVTHCGGLPLAVKALGGLL--ANKHTVPEW 383

Query: 390 AELCLNLGSDLKEDG---HYSFAQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKV 446
             +  N+GS +         S   + ++L  +Y+    +     LYL  FP +  +  + 
Sbjct: 384 KRVSDNIGSQIVGGSCLDDNSLNSVNRILSLSYEDLPTHLKHRFLYLAHFPEDSKIYTQD 443

Query: 447 VIRRWLAEGYARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEF 506
           +   W AEG       + S EY  +    +L+ RN++   +   + E   C+ H +M E 
Sbjct: 444 LFNYWAAEGIYDGSTIQDSGEYYLE----ELVRRNLVIADNRYLSLEFNFCQMHDMMREV 499

Query: 507 LLNKSLAQRFIGTSLHDHPRVGINT---SNARHLSVDAAKQTECVASDEELSRVRSLTIF 563
            L+K+  + F+           IN    S +R  S+ + K    +       +VRSL + 
Sbjct: 500 CLSKAKEENFLQIIKDPTSTSTINAQSPSRSRRFSIHSGKAFHILGHRNN-PKVRSLIVS 558

Query: 564 GDAGD----TISCLRKCKLLRVLDLQECNGLNDDHLKHMYELWHLKYLSL-GGYINELPR 618
               D    + S      LLRVLDL             +  L HL+YLSL G  ++ LP 
Sbjct: 559 RFEEDFWIRSASVFHNLTLLRVLDLSRVKFEGGKLPSSIGGLIHLRYLSLYGAVVSHLPS 618

Query: 619 SIQ 621
           +++
Sbjct: 619 TMR 621
>AT1G59620.1 | chr1:21902627-21905527 FORWARD LENGTH=843
          Length = 842

 Score =  102 bits (254), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 138/548 (25%), Positives = 238/548 (43%), Gaps = 56/548 (10%)

Query: 177 EPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVG 236
           E +++L+  L EVE   +  +V+SI G GG+GKTTLA+ V++    K  F   AW+  V 
Sbjct: 134 ENVKKLVGHLVEVE---DSSQVVSITGMGGIGKTTLARQVFNHETVKSHFAQLAWV-CVS 189

Query: 237 SPETSDWMRGILRDVLRQVRPGD-AMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LR 294
              T  +   + + +LR+V P    +++    L+  L   L  ++ L         +   
Sbjct: 190 QQFTRKY---VWQTILRKVGPEYIKLEMTEDELQEKLFRLLGTRKALIVLDDIWREEDWD 246

Query: 295 IIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDS----KKLAFSGLRS 350
           +IE IFP  G G ++++T+ N+ VA   ++ NG++++   L  E+S    +++ F G  +
Sbjct: 247 MIEPIFP-LGKGWKVLLTSRNEGVALR-ANPNGFIFKPDCLTPEESWTIFRRIVFPGENT 304

Query: 351 VEPG------QGPASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDG 404
            E        +    ++  C GLPLAL  +   L      T +    +  N+ S +   G
Sbjct: 305 TEYKVDEKMEELGKQMIKHCGGLPLALKVLGGLL--VVHFTLDEWKRIYGNIKSHIV--G 360

Query: 405 HYSF-----AQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARS 459
             SF     + +  +L  +++    Y   C LYL  FP +  +  + +   W AEG  R 
Sbjct: 361 GTSFNDKNMSSVYHILHLSFEELPIYLKHCFLYLAQFPEDFTIDLEKLSYYWAAEGMPR- 419

Query: 460 DDPRRSEEYT----ADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQR 515
             PR  +  T     D    +L+ RN++           +TC  H I+ E  L K+  + 
Sbjct: 420 --PRYYDGATIRKVGDGYIEELVKRNMVISERDARTRRFETCHLHDIVREVCLLKAEEEN 477

Query: 516 FIGTSLHDHPRVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTIS---C 572
            I T     P      S  R L V    +T+     +   ++RSL    + G        
Sbjct: 478 LIETENSKSP------SKPRRLVVKGGDKTDMEGKLKN-PKLRSLLFIEELGGYRGFEVW 530

Query: 573 LRKCKLLRVLDLQECNGLNDDHLKHMYELWHLKYLSL-GGYINELPRSIQGLHCLETLDL 631
             + +L+RVLDL        +    +  L HL+YLSL     + LP S+Q L  L  L+L
Sbjct: 531 FTRLQLMRVLDLHGVE-FGGELPSSIGLLIHLRYLSLYRAKASHLPSSMQNLKMLLYLNL 589

Query: 632 RRTEIKFLPIEAIMLPHLAHLFGKFMLHKDD-----LKNAKKMSKLQKF--FSSNKSNLK 684
              E  ++ I   +   L   +    L  DD       + + M++L+    +   + N+K
Sbjct: 590 CVQESCYIYIPNFLKEMLELKYLSLPLRMDDKSMGEWGDLQFMTRLRALSIYIRGRLNMK 649

Query: 685 TLAGFITE 692
           TL+  +++
Sbjct: 650 TLSSSLSK 657
>AT1G10920.1 | chr1:3644587-3647004 REVERSE LENGTH=728
          Length = 727

 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 122/494 (24%), Positives = 205/494 (41%), Gaps = 44/494 (8%)

Query: 156 EPRXXXXTPARAACGPPVGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKA 215
           E +    T A ++    VG+ + +E L   L     E + ++V+SI G GG+GKTTLA+ 
Sbjct: 24  EQKEIRQTFANSSESDLVGVEQSVEALAGHL----VENDNIQVVSISGMGGIGKTTLARQ 79

Query: 216 VYDDPRTKEKFYHRAWI-AAVGSPETSDWMRGILRDVLRQVRP--GDAMDVDGQHLEASL 272
           V+     +  F   AW+  +    +   W R     + ++++P  GD   +D   L+  L
Sbjct: 80  VFHHDMVQRHFDGFAWVFVSQQFTQKHVWQR-----IWQELQPQNGDISHMDEHILQGKL 134

Query: 273 REYLKDKRYLXXXXXXXXXQ-LRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQ 331
            + L+  RYL         +    I+++FP    G ++++T+ N+ V    +    + ++
Sbjct: 135 FKLLETGRYLVVLDDVWKEEDWDRIKAVFPRK-RGWKMLLTSRNEGVG-IHADPKSFGFK 192

Query: 332 MKTLGKEDSKKL-------------AFSGLRSVEPGQGPAS-LLAKCDGLPLALVSVSDY 377
            + L  E+S KL               S +R  E  +     ++  C GLPLA+  +   
Sbjct: 193 TRILTPEESWKLCEKIVFHRRDETGTLSEVRVDEDMEAMGKEMVTCCGGLPLAVKVLGGL 252

Query: 378 LKSSSEPTGELCAELCLNLGSDL--KEDGHYSFAQLRKVLLDNYDSFSGYTLSCLLYLGI 435
           L  +++ T      +  N+G  L  +     +   + +VL  +Y++       C LYL  
Sbjct: 253 L--ATKHTVPEWKRVYDNIGPHLAGRSSLDDNLNSIYRVLSLSYENLPMCLKHCFLYLAH 310

Query: 436 FPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRNNSEVK 495
           FP    +  K +     AEG   S D   + +   +    +L  RN+I           K
Sbjct: 311 FPEYYEIHVKRLFNYLAAEGIITSSDDGTTIQDKGEDYLEELARRNMITIDKNYMFLRKK 370

Query: 496 TCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVGINT---SNARHLSVDAAKQTECVASDE 552
            C+ H +M E  L+K+  + F+           IN    S +R LSV        +    
Sbjct: 371 HCQMHDMMREVCLSKAKEENFLEIFKVSTATSAINARSLSKSRRLSVHGGNALPSLGQTI 430

Query: 553 ELSRVRSLTIFGDAGD------TISCLRKCKLLRVLDLQECNGLNDDHLKHMYELWHLKY 606
              +VRSL  F    +      T  C R   LLRVLDL             + +L HL++
Sbjct: 431 N-KKVRSLLYFAFEDEFCILESTTPCFRSLPLLRVLDLSRVKFEGGKLPSSIGDLIHLRF 489

Query: 607 LSLG-GYINELPRS 619
           LSL   +I+ LP S
Sbjct: 490 LSLHRAWISHLPSS 503
>AT1G58400.1 | chr1:21696165-21699118 REVERSE LENGTH=901
          Length = 900

 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 176/805 (21%), Positives = 320/805 (39%), Gaps = 94/805 (11%)

Query: 16  KLFMVLDKEYNKHKALEQEVASLQQEFRMVAAAMDDQLLSMGRSDAHARTA-VARLHAEE 74
           KL+  L +EY + + +E  +A L+    ++ + + D       ++A   T+ + R   EE
Sbjct: 12  KLWDRLTQEYEQFQGVEDRIAELKSNLNLLKSFLKD-------AEAKKNTSQMVRHCVEE 64

Query: 75  MLDLEHDIEDCVDRFTHLLTCSHSNPSGR----TSLVCRVKHEVKKVQSRSSFSEEIQKL 130
           + ++ +D E+ ++ F  +L  +    SG     T L C   H       R  F+ +I  +
Sbjct: 65  IKEIVYDTENMIETF--ILKEAARKRSGIIRRITKLTCIKVH-------RWEFASDIGGI 115

Query: 131 RRRLSEA---------QQRVXXXXXXXXXXXXGFEPRXXXXTPARAACGPPVGIGEPMEE 181
            +R+S+          QQ +                R    T +R      VG+   +++
Sbjct: 116 SKRISKVIQDMHSFGVQQMISDGSQSSHLLQE--REREMRQTFSRGYESDFVGLEVNVKK 173

Query: 182 LLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETS 241
           L+  L     E + ++++S+ G GGLGKTTLA+ V++    K +F   AW+         
Sbjct: 174 LVGYL----VEEDDIQIVSVTGMGGLGKTTLARQVFNHEDVKHQFDRLAWVCVSQEFTRK 229

Query: 242 DWMRGILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQ-LRIIESIF 300
           +  + IL+++  +    + + ++   L   L + L+  + L         +   +I  IF
Sbjct: 230 NVWQMILQNLTSRETKDEILQMEEAELHDELFQLLETSKSLIVFDDIWKEEDWGLINPIF 289

Query: 301 PDNGTGSRIIVTTDNQQVANTCSH-----GNGYVYQMKTLGKEDSKKLAFSGLRSVEPGQ 355
           P        I    N++  N          +  ++Q   + + D  +         E   
Sbjct: 290 PPK---KETIAMHGNRRYVNFKPECLTILESWILFQRIAMPRVDESEFKVDK----EMEM 342

Query: 356 GPASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLK-----EDGHYSFAQ 410
               ++  C GLPLA+  +   L  +++ T      L  N+G  +       DG+ S   
Sbjct: 343 MGKQMIKYCGGLPLAVKVLGGLL--AAKYTFHDWKRLSENIGCHIVGRTDFSDGNNS--S 398

Query: 411 LRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYT- 469
           +  VL  +++    Y   C LYL  FP +  +K + +   W AEG     +PR     T 
Sbjct: 399 VYHVLSLSFEELPSYLKHCFLYLAHFPEDHNIKVEKLSYCWAAEGIL---EPRHYHGQTI 455

Query: 470 ---ADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPR 526
               +    +L+ RN++           + C  H +M E  L K+  + F+  +    P 
Sbjct: 456 RDVGESYIEELVRRNMVIAERDVTTLRFEACHLHDMMREVCLLKAKEENFVQIASILPPT 515

Query: 527 VGINTSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTI-----SCLRKCKLLRV 581
                       V     T  V+ D    +++SL I  +          S   + +LLRV
Sbjct: 516 ANSQYPGTSRRFVSQNPTTLHVSRDINNPKLQSLLIVWENRRKSWKLLGSSFIRLELLRV 575

Query: 582 LDLQECNGLNDDHLKHMYELWHLKYLSLG-GYINELPRSIQGLHCLETLDLRR-TEIKFL 639
           LDL +      +    + +L HL+YL+L    ++ LP S+  L  L  LD+   T+  F+
Sbjct: 576 LDLYKAKFEGRNLPSGIGKLIHLRYLNLDLARVSRLPSSLGNLRLLIYLDINVCTKSLFV 635

Query: 640 PIEAIMLPHLAHLFGKFMLHKD---DLKNAKKMSKLQKFFSSNKSNLKTLAGFITEEGKE 696
           P   + +  L +L   F   K+    L N   +  L+  FS+  S+L+ L G ++     
Sbjct: 636 PNCLMGMHELRYLRLPFNTSKEIKLGLCNLVNLETLEN-FSTENSSLEDLRGMVSLRT-- 692

Query: 697 FLQLIGHMKKLRKVKIWC-----KHVEGSSNYIADLSKAIQEFTKTPIDMD--------- 742
               IG  K + K  ++      +H+E  S    D S   +   +  I +D         
Sbjct: 693 --LTIGLFKHISKETLFASILGMRHLENLSIRTPDGSSKFKRIMEDGIVLDAIHLKQLNL 750

Query: 743 RVRFLSLDSEECSENFLSSIHLEPC 767
           R+    L  E+   + L+SI L+ C
Sbjct: 751 RLYMPKLPDEQHFPSHLTSISLDGC 775
>AT3G14460.1 | chr3:4851990-4856264 REVERSE LENGTH=1425
          Length = 1424

 Score = 96.7 bits (239), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 226/548 (41%), Gaps = 71/548 (12%)

Query: 187 DEVE-GEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMR 245
           DE+  G+P    VIS+VG  G+GKTTL + V++D R  E F  + WI+A  +       +
Sbjct: 186 DEISIGKPA---VISVVGMPGVGKTTLTEIVFNDYRVTEHFEVKMWISAGINFNVFTVTK 242

Query: 246 GILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXX---XXXXXQLRIIESIFPD 302
            +L+D+       +    D   L+  L++ L  KR+L            +    +  F D
Sbjct: 243 AVLQDITSSAVNTE----DLPSLQIQLKKTLSGKRFLLVLDDFWSESDSEWESFQVAFTD 298

Query: 303 NGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDS----KKLAFSGLRSVEPGQ--- 355
              GS+I++TT ++ V+         +YQMK +  E+      + AF  +      Q   
Sbjct: 299 AEEGSKIVLTTRSEIVSTVAKAEK--IYQMKLMTNEECWELISRFAFGNISVGSINQELE 356

Query: 356 GPASLLA-KCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKV 414
           G    +A +C GLPLA  +++ +L+S   P                K    Y+ + L  V
Sbjct: 357 GIGKRIAEQCKGLPLAARAIASHLRSKPNPDDWYAVS---------KNFSSYTNSIL-PV 406

Query: 415 LLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKNF 474
           L  +YDS       C     IFP      ++ ++  W+A          R  E   +   
Sbjct: 407 LKLSYDSLPPQLKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYL 466

Query: 475 RKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDH-PRVGINTSN 533
             L+ ++  Q +D    S V     H +M++  L K+++  F      D+ P +    S 
Sbjct: 467 GDLVAQSFFQRLDITMTSFV----MHDLMND--LAKAVSGDFCFRLEDDNIPEI---PST 517

Query: 534 ARHLSVDAAKQTECVASDEELSRVRSLTIFG-DAGDTISCLRKCKLLRVLDLQECNGLND 592
            RH S     +++C AS      V   +I G +   TI        L  L L E   LN 
Sbjct: 518 TRHFSF---SRSQCDAS------VAFRSICGAEFLRTILPFNSPTSLESLQLTE-KVLN- 566

Query: 593 DHLKHMYELWHLKYLSLGGY-INELPRSIQGLHCLETLDLRRTEIKFLPIEAIMLPHLAH 651
                +  L  L+ LSL  Y I  LP+S++GL  L  LDL  T+IK LP     L +L  
Sbjct: 567 ---PLLNALSGLRILSLSHYQITNLPKSLKGLKLLRYLDLSSTKIKELPEFVCTLCNLQT 623

Query: 652 LFGKFMLHKDDLKNAKKMSKLQKFFSSNKSNLKTLAGFITEEGKEFLQLIGHMKKLRKVK 711
           L          L N + ++ L K   +   NL+ L       G   +++   +KKLR ++
Sbjct: 624 LL---------LSNCRDLTSLPKSI-AELINLRLLDLV----GTPLVEMPPGIKKLRSLQ 669

Query: 712 IWCKHVEG 719
                V G
Sbjct: 670 KLSNFVIG 677
>AT3G14470.1 | chr3:4857940-4861104 FORWARD LENGTH=1055
          Length = 1054

 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 141/567 (24%), Positives = 232/567 (40%), Gaps = 83/567 (14%)

Query: 174 GIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIA 233
           G  +  +E++  L    G+   + V++IVG GG+GKTTL++ +Y+D   +  F  + W  
Sbjct: 174 GRDDDKDEIMRFLIPENGKDNGITVVAIVGIGGVGKTTLSQLLYNDQHVRSYFGTKVWAH 233

Query: 234 AVGSPETSDWMRGILRDVLRQVRPGDAMDVDGQHLEASLREYLKDK-----RYLXXXXXX 288
                +     + +   V    RP +  D+D   L+  L+E L          L      
Sbjct: 234 VSEEFDVFKITKKVYESV--TSRPCEFTDLDV--LQVKLKERLTGTGLPFLLVLDDLWNE 289

Query: 289 XXXQLRIIESIFPDNGTGSRIIVTTDNQQVANT-CSHGNGYVYQMKTLGKEDSKKLAFSG 347
                 ++   F     GS+I+VTT +Q+VA+  C+    +V+ ++ L   D   L    
Sbjct: 290 NFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCA---VHVHNLQPLSDGDCWSLF--- 343

Query: 348 LRSVEPGQGPA----------SLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLG 397
           +++V   Q P            ++ KC GLPLA+ ++   L+   +       E    L 
Sbjct: 344 MKTVFGNQEPCLNREIGDLAERIVHKCRGLPLAVKTLGGVLRFEGK-----VIEWERVLS 398

Query: 398 S---DLKEDGHYSFAQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAE 454
           S   DL  D     + L  VL  +Y     +   C  Y  IFP     +K  V+  W+AE
Sbjct: 399 SRIWDLPADK----SNLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFEKDKVVLLWMAE 454

Query: 455 GYARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQ 514
           G+ +     ++ E   ++ F +L  R+++Q   TR            IMH+F+    LAQ
Sbjct: 455 GFLQQTRSSKNLEELGNEYFSELESRSLLQKTKTRY-----------IMHDFI--NELAQ 501

Query: 515 RFIG---TSLHDHPRVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTIS 571
              G   +   D  ++ + +   R+LS       E +   E L  V+ L  F     T S
Sbjct: 502 FASGEFSSKFEDGCKLQV-SERTRYLSYLRDNYAEPMEF-EALREVKFLRTFLPLSLTNS 559

Query: 572 CLRKCKL--------------LRVLDLQ--ECNGLNDDHLKHMYELWHLKYLSLG-GYIN 614
             R C L              LRVL L   +   L  D  K++    H ++L L    + 
Sbjct: 560 S-RSCCLDQMVSEKLLPTLTRLRVLSLSHYKIARLPPDFFKNIS---HARFLDLSRTELE 615

Query: 615 ELPRSIQGLHCLETLDLRR-TEIKFLPIEA---IMLPHLAHLFGKFMLHKDDLKNAKKMS 670
           +LP+S+  ++ L+TL L   + +K LP +    I L +L  +  K           K + 
Sbjct: 616 KLPKSLCYMYNLQTLLLSYCSSLKELPTDISNLINLRYLDLIGTKLRQMPRRFGRLKSLQ 675

Query: 671 KLQKFF--SSNKSNLKTLAGFITEEGK 695
            L  FF  +S+ S +  L G     GK
Sbjct: 676 TLTTFFVSASDGSRISELGGLHDLHGK 702
>AT1G61190.1 | chr1:22557602-22560687 FORWARD LENGTH=968
          Length = 967

 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 197/466 (42%), Gaps = 56/466 (12%)

Query: 196 VRVISIVGFGGLGKTTLAKAVYDD-PRTKEKFYHRAWIAAVGSPETSDWMRGILRDVLRQ 254
           V ++ + G GG+GKTTL K +++    T   F    WI      + S     +  D+  +
Sbjct: 173 VGIMGLHGMGGVGKTTLFKKIHNKFAETGGTFDIVIWIVVSQGAKLSK----LQEDIAEK 228

Query: 255 VRPGDAMDVDGQHLEAS--LREYLKDKRY-LXXXXXXXXXQLRIIESIFPDNGTGSRIIV 311
           +   D +  +    + +  +   LK KR+ L          L  I   +P      ++  
Sbjct: 229 LHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAF 288

Query: 312 TTDNQQVANTCSHGNGYVYQMKTLGKEDS-----KKLAFSGLRSVEPGQGPASLLA-KCD 365
           TT +Q+V      G+    Q+K L  ED+      K+  + LRS     G A  +A KC 
Sbjct: 289 TTRDQKVCG--QMGDHKPMQVKCLEPEDAWELFKNKVGDNTLRSDPVIVGLAREVAQKCR 346

Query: 366 GLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQ--LRKVLLDNYDSFS 423
           GLPLAL  + + + S +     +  E    +    +    +S  Q  +  +L  +YDS  
Sbjct: 347 GLPLALSCIGETMASKT-----MVQEWEHAIDVLTRSAAEFSDMQNKILPILKYSYDSLE 401

Query: 424 G-YTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKNFRKLIDRNI 482
             +  SC LY  +FP +  +  K +I +W+ EG+   D   +       +    LI  N+
Sbjct: 402 DEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGEDQVIKRARNKGYEMLGTLIRANL 461

Query: 483 IQPVDTRNNSEVKTCKTHGIMHEFLLNKSL--AQRFIGTSLHDH---PRVGINTSNARHL 537
           +    T +   V   K H +MH+ +   +L  A  F G    ++    RVG++       
Sbjct: 462 L----TNDRGFV---KWHVVMHDVVREMALWIASDF-GKQKENYVVRARVGLHE------ 507

Query: 538 SVDAAKQTECVASDEELSRVRSLTIFGDAGDTISCLRKCKLLRVLDLQ--ECNGLNDDHL 595
                     +   ++   VR +++  +  + I+C  KC  L  L LQ  +   L+ + +
Sbjct: 508 ----------IPKVKDWGAVRRMSLMMNEIEEITCESKCSELTTLFLQSNQLKNLSGEFI 557

Query: 596 KHMYELWHLKYLSLGGYINELPRSIQGLHCLETLDLRRTEIKFLPI 641
           ++M +L  L  LS     NELP  I GL  L+ LDL  T I+ LP+
Sbjct: 558 RYMQKLVVLD-LSHNPDFNELPEQISGLVSLQYLDLSWTRIEQLPV 602
>AT1G61300.1 | chr1:22607714-22610175 REVERSE LENGTH=763
          Length = 762

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 202/488 (41%), Gaps = 58/488 (11%)

Query: 171 PPVGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDD-PRTKEKFYHR 229
           P +G  E +E+  + L E     ++V ++ + G GG+GKTTL K +++   +   +F   
Sbjct: 41  PTIGQEEMLEKAWNRLME-----DRVGIMGLHGMGGVGKTTLFKKIHNKFAKMSSRFDIV 95

Query: 230 AWIAAVGSPETSDWMRGILRDVLRQVRPGDAMDVDGQHLEAS--LREYLKDKRY-LXXXX 286
            WI      + S     +  D+  ++   D +  +    + +  +   LK KR+ L    
Sbjct: 96  IWIVVSKGAKLSK----LQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDD 151

Query: 287 XXXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDS-----K 341
                 L  I   +P      ++  TT +Q+V      G+    Q+K L  ED+      
Sbjct: 152 IWEKVDLEAIGVPYPSEVNKCKVAFTTRDQKVCG--EMGDHKPMQVKCLEPEDAWELFKN 209

Query: 342 KLAFSGLRS----VEPGQGPASLLAKCDGLPLALVSVSDYLKSSSE-PTGELCAELCLNL 396
           K+  + LRS    VE  +  A    KC GLPLAL  + + + S +     E   ++    
Sbjct: 210 KVGDNTLRSDPVIVELAREVAQ---KCRGLPLALSVIGETMASKTMVQEWEHAIDVLTRS 266

Query: 397 GSDLKEDGHYSFAQLRKVLLDNYDSFSG-YTLSCLLYLGIFPNNRPLKKKVVIRRWLAEG 455
            ++    G+    ++  +L  +YDS    +  SC LY  +FP +  +  + +I  W+ EG
Sbjct: 267 AAEFSNMGN----KILPILKYSYDSLGDEHIKSCFLYCALFPEDDEIYNEKLIDYWICEG 322

Query: 456 YARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQR 515
           +   D   +       +    L   N++  V T           H +MH+ +   +L   
Sbjct: 323 FIGEDQVIKRARNKGYEMLGTLTLANLLTKVGTE----------HVVMHDVVREMAL--- 369

Query: 516 FIGTSLHDHPRVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTISCLRK 575
           +I +                +  V A          ++   VR +++  +  + I+C  K
Sbjct: 370 WIASDFGKQ---------KENFVVRARVGLHERPEAKDWGAVRRMSLMDNHIEEITCESK 420

Query: 576 CKLLRVLDLQ--ECNGLNDDHLKHMYELWHLKYLSLGGYINELPRSIQGLHCLETLDLRR 633
           C  L  L LQ  +   L+ + +++M +L  L  LS     N+LP  I GL  L+ LDL  
Sbjct: 421 CSELTTLFLQSNQLKNLSGEFIRYMQKLVVLD-LSYNRDFNKLPEQISGLVSLQFLDLSN 479

Query: 634 TEIKFLPI 641
           T IK LP+
Sbjct: 480 TSIKQLPV 487
>AT1G61310.1 | chr1:22613166-22615943 REVERSE LENGTH=926
          Length = 925

 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 202/498 (40%), Gaps = 45/498 (9%)

Query: 171 PPVGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDD-PRTKEKFYHR 229
           P +G  E +E+  + L E     + V ++ + G GG+GKTTL K +++        F   
Sbjct: 154 PTIGQEEMLEKAWNRLME-----DGVGIMGLHGMGGVGKTTLFKKIHNKFAEIGGTFDIV 208

Query: 230 AWIAAVGSPETSDWMRGILRDVLRQVRPGDAMDVDGQHLEAS--LREYLKDKRY-LXXXX 286
            WI      + S     +  D+  ++   D +  +    + +  +   LK KR+ L    
Sbjct: 209 IWIVVSQGAKLSK----LQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKRFVLMLDD 264

Query: 287 XXXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDS-----K 341
                 L  I   +P      ++  TT +++V      G+    Q+  L  ED+      
Sbjct: 265 IWEKVDLEAIGIPYPSEVNKCKVAFTTRSREVCG--EMGDHKPMQVNCLEPEDAWELFKN 322

Query: 342 KLAFSGLRSVEPGQGPASLLA-KCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDL 400
           K+  + L S     G A  +A KC GLPLAL  + + + S +     +  E    +    
Sbjct: 323 KVGDNTLSSDPVIVGLAREVAQKCRGLPLALNVIGETMASKT-----MVQEWEYAIDVLT 377

Query: 401 KEDGHYSFAQ--LRKVLLDNYDSFSG-YTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYA 457
           +    +S  +  +  +L  +YDS    +  SC LY  +FP +  +  + +I + + EG+ 
Sbjct: 378 RSAAEFSGMENKILPILKYSYDSLGDEHIKSCFLYCALFPEDGQIYTETLIDKLICEGFI 437

Query: 458 RSDDPRRSEEYTADKNFRKLIDRNIIQPVDTR-NNSEVKTCKTHGIMHEFLLNKSLAQRF 516
             D   +            L   N++  V T   N   K    H +MH+ +   +L   +
Sbjct: 438 GEDQVIKRARNKGYAMLGTLTRANLLTKVGTELANLLTKVSIYHCVMHDVVREMAL---W 494

Query: 517 IGTSLHDHPRVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTISCLRKC 576
           I +                +  V A+     +   ++   VR +++  +  + I+C  KC
Sbjct: 495 IASDFGKQ---------KENFVVQASAGLHEIPEVKDWGAVRRMSLMRNEIEEITCESKC 545

Query: 577 KLLRVLDLQ--ECNGLNDDHLKHMYELWHLKYLSLGGYINELPRSIQGLHCLETLDLRRT 634
             L  L LQ  +   L+ + +++M +L  L  LS     NELP  I GL  L+ LDL  T
Sbjct: 546 SELTTLFLQSNQLKNLSGEFIRYMQKLVVLD-LSDNRDFNELPEQISGLVSLQYLDLSFT 604

Query: 635 EIKFLPIEAIMLPHLAHL 652
            I+ LP+    L  L  L
Sbjct: 605 RIEQLPVGLKELKKLTFL 622
>AT1G12220.1 | chr1:4145011-4147680 FORWARD LENGTH=890
          Length = 889

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 120/508 (23%), Positives = 204/508 (40%), Gaps = 64/508 (12%)

Query: 198 VISIVGFGGLGKTTLAKAVYDD-PRTKEKFYHRAWIAAVGSPETSDWMRGILRDVLRQVR 256
           ++ + G GG+GKTTL   + +   +  ++F    W+    S      +R I RD+  +V 
Sbjct: 178 ILGLYGMGGVGKTTLLTKINNKFSKIDDRFDVVIWVVVSRSST----VRKIQRDIAEKVG 233

Query: 257 PG--DAMDVDGQHLEASLREYLKDKRY-LXXXXXXXXXQLRIIESIFPDNGTGSRIIVTT 313
            G  +  + +   +   +   L+ +++ L          L+ +   +P    G ++  TT
Sbjct: 234 LGGMEWSEKNDNQIAVDIHNVLRRRKFVLLLDDIWEKVNLKAVGVPYPSKDNGCKVAFTT 293

Query: 314 DNQQVANTCSHGNGYVYQMKTLGKEDS-----KKLAFSGLRSVEPGQGPASLLA-KCDGL 367
            ++ V      G     ++  L  E+S      K+  + L S     G A  +A KC GL
Sbjct: 294 RSRDVCG--RMGVDDPMEVSCLQPEESWDLFQMKVGKNTLGSHPDIPGLARKVARKCRGL 351

Query: 368 PLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKVLLDNYDSFSGYTL 427
           PLAL  + + + +      E C  + +   S +   G     ++  VL  +YD+ +G  +
Sbjct: 352 PLALNVIGEAM-ACKRTVHEWCHAIDVLTSSAIDFSGMED--EILHVLKYSYDNLNGELM 408

Query: 428 -SCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKNFRKLIDRNIIQPV 486
            SC LY  +FP +  + K+ ++  W++EG+    + R        +    L+ R  +   
Sbjct: 409 KSCFLYCSLFPEDYLIDKEGLVDYWISEGFINEKEGRERNINQGYEIIGTLV-RACLLLE 467

Query: 487 DTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVGINTSNARHLSVDAAKQTE 546
           + RN S V   K H ++ E  L       +I + L       I         V A     
Sbjct: 468 EERNKSNV---KMHDVVREMAL-------WISSDLGKQKEKCI---------VRAGVGLR 508

Query: 547 CVASDEELSRVRSLTIFGDAGDTISCLRKCKLLRVLDLQECNGLNDDHLKHMYELW---- 602
            V   ++ + VR +++  +  + I    +C  L  L LQ+     +D +K   E +    
Sbjct: 509 EVPKVKDWNTVRKISLMNNEIEEIFDSHECAALTTLFLQK-----NDVVKISAEFFRCMP 563

Query: 603 HLKYLSL--GGYINELPRSIQGLHCLETLDLRRTEIKFLPIEAIMLPHLAHLFGKFMLHK 660
           HL  L L     +NELP  I  L  L   +L  T I  LP+    L  L HL        
Sbjct: 564 HLVVLDLSENQSLNELPEEISELASLRYFNLSYTCIHQLPVGLWTLKKLIHL-------- 615

Query: 661 DDLKNAKKMSKLQKFFS-SNKSNLKTLA 687
               N + MS L      SN  NL+TL 
Sbjct: 616 ----NLEHMSSLGSILGISNLWNLRTLG 639
>AT1G61180.2 | chr1:22551486-22554185 FORWARD LENGTH=900
          Length = 899

 Score = 72.8 bits (177), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 111/501 (22%), Positives = 193/501 (38%), Gaps = 84/501 (16%)

Query: 171 PPVGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRA 230
           P +G  + +E+  + L E     + V ++ + G GG+GKTTL K +           H  
Sbjct: 152 PTIGQEDMLEKAWNRLME-----DGVGIMGLHGMGGVGKTTLFKKI-----------HNK 195

Query: 231 WIAAVGSPETSDWM---RGIL-----RDVLRQVRPGDAMDVDGQHLEAS--LREYLKDKR 280
           +    G+ +   W+   +G++      D+  ++   D +  +    + +  +   LK KR
Sbjct: 196 FAEIGGTFDIVIWIVVSKGVMISKLQEDIAEKLHLCDDLWKNKNESDKATDIHRVLKGKR 255

Query: 281 Y-LXXXXXXXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKED 339
           + L          L  I   +P      ++  TT +++V      G+    Q+  L  ED
Sbjct: 256 FVLMLDDIWEKVDLEAIGIPYPSEVNKCKVAFTTRSREVCG--EMGDHKPMQVNCLEPED 313

Query: 340 SKKLAFSGLRSVEPGQGPA------SLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELC 393
           + +L  + +        P        +  KC GLPLAL  + + + S +       A   
Sbjct: 314 AWELFKNKVGDNTLSSDPVIVELAREVAQKCRGLPLALNVIGETMSSKTMVQEWEHAIHV 373

Query: 394 LNLGSDLKEDGHYSFAQLRKVLLDNYDSFSG-YTLSCLLYLGIFPNNRPLKKKVVIRRWL 452
            N  +    D      ++  +L  +YDS    +  SC LY  +FP +  +  + +I  W+
Sbjct: 374 FNTSAAEFSDMQ---NKILPILKYSYDSLGDEHIKSCFLYCALFPEDGEIYNEKLIDYWI 430

Query: 453 AEGYARSDDPRRSEEYTADKNFRKLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSL 512
            EG+   D   +            L   N++  V T        C  H ++ E  L   +
Sbjct: 431 CEGFIGEDQVIKRARNKGYAMLGTLTRANLLTKVGTY------YCVMHDVVREMAL--WI 482

Query: 513 AQRF----------IGTSLHDHPRVGINTSNARHLSVDAAKQTECVASDEELSRVRSLTI 562
           A  F           G  LH+ P+V                        ++   VR +++
Sbjct: 483 ASDFGKQKENFVVQAGVGLHEIPKV------------------------KDWGAVRKMSL 518

Query: 563 FGDAGDTISCLRKCKLLRVLDLQ--ECNGLNDDHLKHMYELWHLKYLSLGGYINELPRSI 620
             +  + I+C  KC  L  L LQ  +   L    +++M +L  L  LS     N+LP  I
Sbjct: 519 MDNDIEEITCESKCSELTTLFLQSNKLKNLPGAFIRYMQKLVVLD-LSYNRDFNKLPEQI 577

Query: 621 QGLHCLETLDLRRTEIKFLPI 641
            GL  L+ LDL  T I+ +PI
Sbjct: 578 SGLVSLQFLDLSNTSIEHMPI 598
>AT5G41740.2 | chr5:16688687-16692801 FORWARD LENGTH=1115
          Length = 1114

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 32/287 (11%)

Query: 163 TPARAACGPPVGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRT 222
           TP+R   G  VG+   ++ L SLL     E ++V++I I G  G+GKTT+A+A++DD R 
Sbjct: 168 TPSRDFEGM-VGMEAHLKRLNSLLCL---ESDEVKMIGIWGPAGIGKTTIARALFDD-RL 222

Query: 223 KEKFYHRAWIAAV-----GSPETSDWMRGILRDVLRQVRPGDAMDVDGQHLEASLREYLK 277
              F H+ ++  +     G  +    +R + + +L ++   + M +   HL A +RE L 
Sbjct: 223 SSSFQHKCFMGNLKGSIKGVADHDSKLR-LQKQLLSKIFKEENMKI--HHLGA-IRERLH 278

Query: 278 DKRYLXXX-XXXXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLG 336
           D+R L          QL ++       G+GSRII TT+++++    +HG   +Y++    
Sbjct: 279 DQRVLIILDDVDDLKQLEVLAKEISWFGSGSRIIGTTEDKKILK--AHGIHNIYRVDFPS 336

Query: 337 KEDS-KKLAFSGLRSVEPGQGPASLLAK----CDGLPLALVSVSDYLKSSSEPTGELCAE 391
           K+D+ + L  S  +      G   L  K    C  LPL L  V   L+       E    
Sbjct: 337 KKDALEILCLSAFKQSSIPDGFEELANKVAKLCSNLPLGLCVVGASLRGEGNQEWE---R 393

Query: 392 LCLNLGSDLKEDGHYSFAQLRKVLLDNYDSFSGYTLSCLLYLGIFPN 438
           L   + S L  D       +  +L   YD       S  L++  F N
Sbjct: 394 LLSRIESSLDRD-------IDDILRIGYDRLLTNDKSLFLHIACFFN 433
>AT1G17600.1 | chr1:6053026-6056572 REVERSE LENGTH=1050
          Length = 1049

 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 127/279 (45%), Gaps = 33/279 (11%)

Query: 170 GPPVGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHR 229
           G  VG+   ME L  LLD+   E  +V ++ I G GG+GKT++ K +YD  +   KF   
Sbjct: 182 GNIVGMKAHMEGLNHLLDQ---ESNEVLLVGIWGMGGIGKTSIVKCLYD--QLSPKFPAH 236

Query: 230 AWIAAVGSPETSDW--MRGILRDVLRQVRPGDAMDVDGQHLEASLREYLK----DKRYLX 283
            +I  + S    +   ++ + +++L  +      D+    +EA  +E  K     K +L 
Sbjct: 237 CFIENIKSVSKDNGHDLKHLQKELLSSIL---CDDIRLWSVEAGCQEIKKRLGNQKVFLV 293

Query: 284 XXXXXXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDS--- 340
                   Q+  +       G GSRII+TT +  + NTC  G   VY++K L  +D+   
Sbjct: 294 LDGVDKVAQVHALAKEKNWFGPGSRIIITTRDMGLLNTC--GVEVVYEVKCLDDKDALQM 351

Query: 341 -KKLAFSGLRSVEPGQGPASLLAKCD----GLPLALVSVSDYLK---SSSEPTGELCAEL 392
            K++AF G   + P +G   L  +      GLP A+ + + +L+   +S E   E    L
Sbjct: 352 FKQIAFEG--GLPPCEGFDQLSIRASKLAHGLPSAIQAYALFLRGRTASPEEWEEALGAL 409

Query: 393 CLNLGSDLKEDGHYSFAQLRK----VLLDNYDSFSGYTL 427
             +L  ++ E    S+  L K    V L     F+G TL
Sbjct: 410 ESSLDENIMEILKISYEGLPKPHQNVFLHVVCLFNGDTL 448
>AT5G48770.1 | chr5:19773277-19777242 REVERSE LENGTH=1191
          Length = 1190

 Score = 60.1 bits (144), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 24/223 (10%)

Query: 173 VGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWI 232
           VG+   ME +  LL +      +V ++ I G GG+GKTT+AK +Y+  +   +F   ++I
Sbjct: 187 VGMEAHMENIRPLLKK--DFDAEVCMVGIWGMGGIGKTTIAKYLYE--QLASQFPAHSFI 242

Query: 233 AAVGS----PETSDWMRGILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXX-X 287
             VG      +     + +L D+L   R       +G +L   +R  L   + L      
Sbjct: 243 EDVGQICKKVDLKCIQQQLLCDILSTKRVALMSIQNGANL---IRSRLGTLKVLFVLDGV 299

Query: 288 XXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDS----KKL 343
               QL  +       G GSRII+TT ++++ ++C   N   Y++K L  EDS    K +
Sbjct: 300 DKVEQLHALAKEASWFGPGSRIIITTRDRRLLDSCRVTNK--YEVKCLQNEDSLKIVKNI 357

Query: 344 AFSG----LRSVEPGQGPASLLAKCDGLPLALVSVSDYLKSSS 382
           AF+G    L   E     AS LA+  GLPLALV+   +L+ ++
Sbjct: 358 AFAGGVPTLDGYERFAIRASQLAQ--GLPLALVAFGSFLRGAT 398
>AT5G41540.1 | chr5:16612659-16616063 REVERSE LENGTH=1039
          Length = 1038

 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 133/306 (43%), Gaps = 33/306 (10%)

Query: 194 EQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKF-----YHRAWIAAVGSPETSDWMRGIL 248
           ++V++I I G  G+GKTT+A+A+Y+   T  +F       +    ++G  +  DW   + 
Sbjct: 203 DEVKMIGIWGPAGIGKTTIARALYNQLSTNFQFKCFMGNLKGSYKSIGV-DNYDWKLNLQ 261

Query: 249 RDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXXXXXXQLRIIESIFPD-NGTGS 307
             +L ++   +  DV   HL   ++++L+DK+ L         +  +  +  P   G+GS
Sbjct: 262 NQLLSKIL--NQNDVKTDHL-GGIKDWLEDKKVLIVIDDVDDLEQLLALAKEPSWFGSGS 318

Query: 308 RIIVTTDNQQVANT-CSHGNGYVYQMKTLGKEDSKKLAFSGLRSVEPGQGPASLLAK--- 363
           RIIVTT ++ +  T   + N + +      K   + L  S  +   P  G   L  K   
Sbjct: 319 RIIVTTKDKTIMKTLLVNDNNFYHVGYPTNKVALEILCLSAFQKSFPRDGFEELARKVAY 378

Query: 364 -CDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKVLLDNYDSF 422
            C  LPL L  V   L+  S+   +L ++    L + L         ++  VL   Y+  
Sbjct: 379 LCGNLPLCLSVVGSSLRGQSKHRWKLQSD---RLETSLDR-------KIEDVLKSAYEKL 428

Query: 423 SGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKNFRKL--IDR 480
           S       L++  F NN  +    V++  LA+    + D R   +  ADK    +  +DR
Sbjct: 429 SKKEQVLFLHIACFFNNTYIS---VVKTLLADS---NLDVRNGLKTLADKCLVHISRVDR 482

Query: 481 NIIQPV 486
             + P+
Sbjct: 483 IFMHPL 488
>AT1G12280.1 | chr1:4174875-4177559 REVERSE LENGTH=895
          Length = 894

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 112/492 (22%), Positives = 193/492 (39%), Gaps = 81/492 (16%)

Query: 198 VISIVGFGGLGKTTLAKAVYDDPRTK-EKFYHRAWIAAVGSPETSDWMRGILRDVLRQVR 256
           ++ + G GG+GKTTL   + +    K   F    W+    SP+    +  I  D+ +++ 
Sbjct: 178 IVGLYGMGGVGKTTLLTRINNKFSEKCSGFGVVIWVVVSKSPD----IHRIQGDIGKRLD 233

Query: 257 PG--DAMDVDGQHLEASLREYL-KDKRYLXXXXXXXXXQLRIIESIFPDNGTGSRIIVTT 313
            G  +  +V+       +   L K K  L          L ++   +P    G +++ TT
Sbjct: 234 LGGEEWDNVNENQRALDIYNVLGKQKFVLLLDDIWEKVNLEVLGVPYPSRQNGCKVVFTT 293

Query: 314 DNQQVAN----------TCSHGN--GYVYQMK----TL-GKEDSKKLAFSGLRSVEPGQG 356
            ++ V            +C   N    ++QMK    TL G  D  +LA    R V     
Sbjct: 294 RSRDVCGRMRVDDPMEVSCLEPNEAWELFQMKVGENTLKGHPDIPELA----RKVA---- 345

Query: 357 PASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYS-----FAQL 411
                 KC GLPLAL  + + +          C  +     + +     Y+       Q+
Sbjct: 346 -----GKCCGLPLALNVIGETMA---------CKRMVQEWRNAIDVLSSYAAEFPGMEQI 391

Query: 412 RKVLLDNYDSFSGYTLS-CLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTA 470
             +L  +YD+ +   +  C LY  +FP +  ++K+ +I  W+ EG+    D   S E   
Sbjct: 392 LPILKYSYDNLNKEQVKPCFLYCSLFPEDYRMEKERLIDYWICEGFI---DENESRERAL 448

Query: 471 DKNFR--KLIDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVG 528
            + +    ++ R  +   +  N  +V   K H ++ E  L       +I + L +H    
Sbjct: 449 SQGYEIIGILVRACLLLEEAINKEQV---KMHDVVREMAL-------WIASDLGEHKERC 498

Query: 529 INTSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTISCLRKCKLLRVLDLQECN 588
           I         V        V   +  S VR +++  +  + +S   +C  L  L LQ+ +
Sbjct: 499 I---------VQVGVGLREVPKVKNWSSVRRMSLMENEIEILSGSPECLELTTLFLQKND 549

Query: 589 GL---NDDHLKHMYELWHLKYLSLGGYINELPRSIQGLHCLETLDLRRTEIKFLPIEAIM 645
            L   +D+  + +  L  L  LS    + +LP  I  L  L  LDL  T IK LP+    
Sbjct: 550 SLLHISDEFFRCIPMLVVLD-LSGNSSLRKLPNQISKLVSLRYLDLSWTYIKRLPVGLQE 608

Query: 646 LPHLAHLFGKFM 657
           L  L +L   +M
Sbjct: 609 LKKLRYLRLDYM 620
>AT4G27190.1 | chr4:13620977-13623934 REVERSE LENGTH=986
          Length = 985

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 110/491 (22%), Positives = 201/491 (40%), Gaps = 72/491 (14%)

Query: 194 EQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWIAAVGSPETSDWMRGILRDVLR 253
           E+ + I + G GG+GKTTL + + +  R +        +  V   +  D      R+V +
Sbjct: 162 EKAQKIGVWGMGGVGKTTLVRTLNNKLREEGATQPFGLVIFVIVSKEFD-----PREVQK 216

Query: 254 QVRPGDAMDVDGQHLEA----SLREY---LKDKRYLXXXXXXXX-XQLRIIESIFPDNGT 305
           Q+   + +D+D Q  E+    + R Y   +K++++L           L ++     +   
Sbjct: 217 QI--AERLDIDTQMEESEEKLARRIYVGLMKERKFLLILDDVWKPIDLDLLGIPRTEENK 274

Query: 306 GSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDSKKL----AFSGLRSVEPGQGPASLL 361
           GS++I+T+   +V    S       ++  L +ED+ +L    A   +RS    +   ++ 
Sbjct: 275 GSKVILTSRFLEVCR--SMKTDLDVRVDCLLEEDAWELFCKNAGDVVRSDHVRKIAKAVS 332

Query: 362 AKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKV---LLDN 418
            +C GLPLA+++V   ++      G+   +L  ++ S L +   +  +   K+   L  +
Sbjct: 333 QECGGLPLAIITVGTAMR------GKKNVKLWNHVLSKLSKSVPWIKSIEEKIFQPLKLS 386

Query: 419 YDSFSGYTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKNFRKLI 478
           YD        C L   +FP +  ++   V+R W+AEG+      +             L 
Sbjct: 387 YDFLEDKAKFCFLLCALFPEDYSIEVTEVVRYWMAEGFMEELGSQEDSMNEGITTVESLK 446

Query: 479 DRNIIQPVDTRNNSEVKTCKTHGIMHEFLL-------NKSLAQRFIGTSLHD------HP 525
           D  +++  D R+     T K H ++ +F +       + S +    GT L D       P
Sbjct: 447 DYCLLEDGDRRD-----TVKMHDVVRDFAIWIMSSSQDDSHSLVMSGTGLQDIRQDKLAP 501

Query: 526 RV-GINTSNARHLSVDAAKQTECVASDEELSR---------------VRSLTIFGDAGDT 569
            +  ++  N +  S+    +  CV +   L +                 +L I   +G  
Sbjct: 502 SLRRVSLMNNKLESLPDLVEEFCVKTSVLLLQGNFLLKEVPIGFLQAFPTLRILNLSGTR 561

Query: 570 ISCLRKCKLLRV-----LDLQECNGLNDDHLKHMYELWHLKYLSL-GGYINELPRSIQGL 623
           I     C LLR+     L L++C  L    L  +  L  L+ L L G +I E PR ++ L
Sbjct: 562 IKSFPSCSLLRLFSLHSLFLRDCFKLV--KLPSLETLAKLELLDLCGTHILEFPRGLEEL 619

Query: 624 HCLETLDLRRT 634
                LDL RT
Sbjct: 620 KRFRHLDLSRT 630
>AT1G12210.1 | chr1:4140948-4143605 FORWARD LENGTH=886
          Length = 885

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 197/484 (40%), Gaps = 45/484 (9%)

Query: 184 SLLDEVEG--EPEQVRVISIVGFGGLGKTTLAKAVYDD-PRTKEKFYHRAWIAAVGSPET 240
           S+LD+V      ++V ++ + G GG+GKTTL   + +   +    F    W+    +   
Sbjct: 162 SMLDKVWNCLMEDKVWIVGLYGMGGVGKTTLLTQINNKFSKLGGGFDVVIWVVVSKNATV 221

Query: 241 SDWMRGILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRY-LXXXXXXXXXQLRIIESI 299
               + I   +    +  D  + + + L+  +   L+ K++ L         +L++I   
Sbjct: 222 HKIQKSIGEKLGLVGKNWDEKNKNQRALD--IHNVLRRKKFVLLLDDIWEKVELKVIGVP 279

Query: 300 FPDNGTGSRIIVTTDNQQVANTCSHGNGY-VYQMKTLGKED--SKKLAFSGLRS-VEPGQ 355
           +P    G ++  TT +++V       N   +  + T    D   KK+  + L S  +  Q
Sbjct: 280 YPSGENGCKVAFTTHSKEVCGRMGVDNPMEISCLDTGNAWDLLKKKVGENTLGSHPDIPQ 339

Query: 356 GPASLLAKCDGLPLALVSVSDYLKSSSEPTGELCAELCLNLGSDLK--EDGHYSFAQLRK 413
               +  KC GLPLAL  + + +           A   L   +D    ED      ++  
Sbjct: 340 LARKVSEKCCGLPLALNVIGETMSFKRTIQEWRHATEVLTSATDFSGMED------EILP 393

Query: 414 VLLDNYDSFSGYTL-SCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADK 472
           +L  +YDS +G    SC LY  +FP +  ++K+++I  W+ EG+ +    R       +K
Sbjct: 394 ILKYSYDSLNGEDAKSCFLYCSLFPEDFEIRKEMLIEYWICEGFIKEKQGR-------EK 446

Query: 473 NFRKLIDRNIIQPVDTRNNSEVKTCKTHGI--MHEFLLNKSLAQRFIGTSLHDHPRVGIN 530
            F +  D   I     R++  ++  K   +  MH+ +   +L   +I + L  H    I 
Sbjct: 447 AFNQGYD---ILGTLVRSSLLLEGAKDKDVVSMHDMVREMAL---WIFSDLGKHKERCI- 499

Query: 531 TSNARHLSVDAAKQTECVASDEELSRVRSLTIFGDAGDTISCLRKCKLLRVLDLQECNGL 590
                   V A    + +   E    V+ +++  +  + I    +C  L  L LQ    L
Sbjct: 500 --------VQAGIGLDELPEVENWRAVKRMSLMNNNFEKILGSPECVELITLFLQNNYKL 551

Query: 591 NDDHLKHMYELWHLKYLSL--GGYINELPRSIQGLHCLETLDLRRTEIKFLPIEAIMLPH 648
            D  ++    +  L  L L     ++ELP  I  L  L+ LDL  T I+ LP     L  
Sbjct: 552 VDISMEFFRCMPSLAVLDLSENHSLSELPEEISELVSLQYLDLSGTYIERLPHGLHELRK 611

Query: 649 LAHL 652
           L HL
Sbjct: 612 LVHL 615
>AT5G41550.1 | chr5:16617232-16620785 REVERSE LENGTH=1086
          Length = 1085

 Score = 55.1 bits (131), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 143/325 (44%), Gaps = 40/325 (12%)

Query: 163 TPARAACGPPVGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRT 222
           TP+R   G  VG+   + +L SLL     E + V++I I G  G+GK+T+A+A+Y+  + 
Sbjct: 178 TPSRDFEGM-VGLEAHLTKLNSLLC---FEGDDVKMIGIWGPAGIGKSTIARALYN--QL 231

Query: 223 KEKFYHRAWIA-------AVGSPETSDWMRGILRDVLRQVRPGDAMDVDGQHLEASLREY 275
              F  + ++        ++   +  ++ + + + +L ++     M V   H  A+++E+
Sbjct: 232 SSSFQLKCFMGNLKGSLKSIVGVDHYEFQKSLQKLLLAKILNQGDMRV---HNLAAIKEW 288

Query: 276 LKDKRYLXXX-XXXXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKT 334
           L+D+R L          QL ++       G+GSRIIV T+++++     HG   +Y +  
Sbjct: 289 LQDQRVLIILDDVDDLEQLEVLAKELSWFGSGSRIIVATEDKKILK--EHGINDIYHVDF 346

Query: 335 LGKEDS-KKLAFSGLRSVEPGQGPASLLAK----CDGLPLALVSVSDYLKSSSEPTGELC 389
              E++ + L  S  +      G   L  K    C  LPL L  V   L+  S+   EL 
Sbjct: 347 PSMEEALEILCLSAFKQSSVPDGFEELAKKVVHLCGNLPLGLSIVGSSLRGESKHEWELQ 406

Query: 390 AELCLNLGSDLKEDGHYSFAQLRKVLLDNYDSFSGYTLSCLLYLGIFPNNRPLKKKVVIR 449
                    +   DG     ++  +L   Y+  S    S  L++  F N R +    V+ 
Sbjct: 407 LPRI-----EASLDG-----KIESILKVGYERLSKKNQSLFLHIACFFNYRSVDYVTVM- 455

Query: 450 RWLAEGYARSDDPRRSEEYTADKNF 474
             LA+    + D R   +  ADK F
Sbjct: 456 --LADS---NLDVRNGLKTLADKCF 475
>AT5G18350.1 | chr5:6074069-6078569 REVERSE LENGTH=1246
          Length = 1245

 Score = 53.1 bits (126), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 31/264 (11%)

Query: 173 VGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWI 232
           VGIG  M ++ SLL    G+   VR+I IVG  G+GKTT+A+A+ D  +  E F   A+I
Sbjct: 194 VGIGRHMRKMKSLLCLESGD---VRMIGIVGPPGIGKTTIARALRD--QISENFQLTAFI 248

Query: 233 AAV------------GSPETSDWMRGILRDVLRQVRPGDAM----DVDGQHLEASLREYL 276
             +            G    + +M    R ++ Q      +    D+   +L A+   +L
Sbjct: 249 DDIRLTYPRRCYGESGLKPPTAFMNDDRRKIVLQTNFLSEILNQKDIVIHNLNAA-PNWL 307

Query: 277 KDKRYLXXXXXXX-XXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTL 335
           KD++ L          QL  +       G GSRII+TT ++++    +H   Y+Y++   
Sbjct: 308 KDRKVLVILDDVDHLEQLDAMAKETGWFGYGSRIIITTQDRKLLK--AHNIDYIYEVGLP 365

Query: 336 GKEDSKKL----AFSGLRSVEPGQGPASLLAKCDG-LPLALVSVSDYLKSSS-EPTGELC 389
            K+D+ ++    AF      +  Q  A  + +  G LPL L  +  YLK  S E      
Sbjct: 366 RKDDALQIFCLSAFGQNFPHDDFQYLACEVTQLAGELPLGLKVLGSYLKGMSLEEWKNAL 425

Query: 390 AELCLNLGSDLKEDGHYSFAQLRK 413
             L   L  D+++   YS+  L +
Sbjct: 426 PRLKTCLDGDIEKTLRYSYDALSR 449
>AT4G10780.1 | chr4:6634779-6637457 REVERSE LENGTH=893
          Length = 892

 Score = 53.1 bits (126), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 127/322 (39%), Gaps = 36/322 (11%)

Query: 362 AKCDGLPLALVSVSDYL--KSSSEPTGELCAELCLNLGSDLKEDGHYSFAQLRKVLLDNY 419
            KC GLPLAL  + + +  K + +        L          D H        +L  +Y
Sbjct: 343 GKCRGLPLALNVIGETMAGKRAVQEWHHAVDVLTSYAAEFSGMDDHILL-----ILKYSY 397

Query: 420 DSFSG-YTLSCLLYLGIFPNNRPLKKKVVIRRWLAEGYARSDDPRRSEEYTADKNFRKL- 477
           D+ +  +  SC  Y  ++P +  +KK  +I  W+ EG+    D    +E   ++ +  L 
Sbjct: 398 DNLNDKHVRSCFQYCALYPEDYSIKKYRLIDYWICEGFI---DGNIGKERAVNQGYEILG 454

Query: 478 -IDRNIIQPVDTRNNSEVKTCKTHGIMHEFLLNKSLAQRFIGTSLHDHPRVGINTSNARH 536
            + R  +   + +N  EV   K H ++ E  L           +L D  +      N   
Sbjct: 455 TLVRACLLSEEGKNKLEV---KMHDVVREMAL----------WTLSDLGK------NKER 495

Query: 537 LSVDAAKQTECVASDEELSRVRSLTIFGDAGDTISCLRKCKLLRVLDLQECNGL---NDD 593
             V A      V   E+   VR L++  +  + IS   +C  L  L LQE   L   + +
Sbjct: 496 CIVQAGSGLRKVPKVEDWGAVRRLSLMNNGIEEISGSPECPELTTLFLQENKSLVHISGE 555

Query: 594 HLKHMYELWHLKYLSLGGYINELPRSIQGLHCLETLDLRRTEIKFLPIEAIMLPHLAHLF 653
             +HM +L  L  LS    ++ LP  I  L  L  LDL  T I+ LP     L  L HL 
Sbjct: 556 FFRHMRKLVVLD-LSENHQLDGLPEQISELVALRYLDLSHTNIEGLPACLQDLKTLIHLN 614

Query: 654 GKFMLHKDDLKNAKKMSKLQKF 675
            + M     +    K+S L+  
Sbjct: 615 LECMRRLGSIAGISKLSSLRTL 636
>AT1G27170.1 | chr1:9434718-9439219 FORWARD LENGTH=1385
          Length = 1384

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 19/209 (9%)

Query: 173 VGIGEPMEELLSLLDEVEGEPEQVRVISIVGFGGLGKTTLAKAVYDDPRTKEKFYHRAWI 232
           VG+  P+++L  L+D        V+V+ + G GG+GKTTLAKA Y+  +    F  RA+I
Sbjct: 190 VGLESPLKDLTGLIDTESSS--GVQVLGLYGMGGIGKTTLAKAFYN--KIVGNFEQRAFI 245

Query: 233 AAVGSPETSD-----WMRGILRDVLRQVRPGDAMDVDGQHLEASLREYLKDKRYLXXXXX 287
           + +    +++       + +++++ R V   + + +  + ++A++ E    K  +     
Sbjct: 246 SDIRERSSAENGLVTLQKTLIKELFRLVPEIEDVSIGLEKIKANVHE---KKIIVVLDDV 302

Query: 288 XXXXQLRIIESIFPDNGTGSRIIVTTDNQQVANTCSHGNGYVYQMKTLGKEDSKKL-AFS 346
               Q+  +       G G+ I++TT + ++ +  S      Y++K L +  + KL ++ 
Sbjct: 303 DHIDQVHALVGETRWYGQGTLIVITTRDSEILSKLSVNQQ--YEVKCLTEPQALKLFSYH 360

Query: 347 GLRSVEPGQGPASL---LAKCDG-LPLAL 371
            LR  EP +   +L   + +  G LPLA+
Sbjct: 361 SLRKEEPTKNLLALSKKIVQISGLLPLAV 389
>AT4G19060.1 | chr4:10445082-10446233 REVERSE LENGTH=384
          Length = 383

 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 22/168 (13%)

Query: 116 KVQSRSSFSEEIQKLRRRLSEAQQRVXXXXXXXXXXXXGFEPRXXXXTPARAACG----- 170
           K++S+S F +E++K++   +E  ++             G +      +P R + G     
Sbjct: 14  KLESKSEFDKELEKIKSSFNEEYEKWSSGKQRGSSSKHGNQSTHGDSSPTRNSSGSSKKG 73

Query: 171 -PPVGIGEPMEEL-----LSLLDEV---------EGEPEQVRVISIVGFGGLGKTTLAKA 215
            P     E   EL        ++E          + E E+ + ++IVG  G+GKTTL +A
Sbjct: 74  RPKANRVETSSELPDHLIRGFINEKLFLKNFLLKQKESEEFKTLAIVGKYGVGKTTLCQA 133

Query: 216 VYDDPRTKEKFYHRAWIAAVG--SPETSDWMRGILRDVLRQVRPGDAM 261
           V++D   K+ ++ R W++     + E  D    +++ +LR +   D M
Sbjct: 134 VFNDEDVKQVYFPRIWVSMYSKETKEDEDPKIDVVKRILRSLGVEDEM 181
  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,627,199
Number of extensions: 868033
Number of successful extensions: 3188
Number of sequences better than 1.0e-05: 44
Number of HSP's gapped: 3132
Number of HSP's successfully gapped: 44
Length of query: 998
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 890
Effective length of database: 8,145,641
Effective search space: 7249620490
Effective search space used: 7249620490
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)