BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0647000 Os11g0647000|Os11g0647000
(935 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848 84 3e-16
AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848 65 2e-10
AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853 64 4e-10
AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902 60 5e-09
AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858 59 9e-09
AT1G61190.1 | chr1:22557602-22560687 FORWARD LENGTH=968 56 8e-08
AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927 56 1e-07
AT5G47260.1 | chr5:19189411-19192516 FORWARD LENGTH=949 54 4e-07
AT1G61300.1 | chr1:22607714-22610175 REVERSE LENGTH=763 54 4e-07
AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909 52 2e-06
AT1G15890.1 | chr1:5461406-5463961 FORWARD LENGTH=852 49 9e-06
>AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848
Length = 847
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 201 NSINAKKMIKFSYTDLRKEYKSCFLYLAIFPPGYPVRRSTIVGRWVVEGLITKEDWPSAV 260
NSI+ + S+ ++R E K CFLY ++FP Y ++ ++ V EG I +ED +
Sbjct: 398 NSIHISTVFDLSFKEMRHELKLCFLYFSVFPEDYEIKVEKLIHLLVAEGFI-QEDEEMMM 456
Query: 261 HHAERCF-DTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFITRIAKKQHIV----EARLS 315
RC+ D L+D LV I GKV + + DL+ + + AK+ + V E + S
Sbjct: 457 EDVARCYIDELVDRSLVKAERI-ERGKVMSCRIHDLLRDLAIKKAKELNFVNVYNEKQHS 515
Query: 316 RHLARH---FSIFNDIRLRGSDRIDKFLRKL-------------PETSQMSMLKVLDLEG 359
+ R + ND L R++K +R ++ +L+VL++EG
Sbjct: 516 SDICRREVVHHLMNDYYL-CDRRVNKRMRSFLFIGERRGFGYVNTTNLKLKLLRVLNMEG 574
Query: 360 CQCFQRN-QHYLKDICNNILLLKYLSLRRTDVTQLPSEINNLYELEVLDISQTEVPEYAT 418
+N + L D+ ++ L+YL + T V+ LP+ I+NL L+ LD S + +Y T
Sbjct: 575 LLFVSKNISNTLPDVIGELIHLRYLGIADTYVSILPASISNLRFLQTLDASGNDPFQYTT 634
>AT3G46710.1 | chr3:17206489-17209032 REVERSE LENGTH=848
Length = 847
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 26/239 (10%)
Query: 196 VW----VNPNSINAKKMIKFSYTDLRKEYKSCFLYLAIFPPGYPVRRSTIVGRWVVEGLI 251
VW V ++I+ + S+ D+ E K CFLYL++FP Y V ++ V EG I
Sbjct: 382 VWSSLRVKDDNIHVSSLFDLSFKDMGHELKLCFLYLSVFPEDYEVDVEKLIQLLVAEGFI 441
Query: 252 TKEDWPSAVHHAERCFDTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFITRIAKKQHIVE 311
+++ + A + L+ + LV GK+ + + DLV EF + +K+ + V
Sbjct: 442 QEDEEMTMEDVARYYIEDLVYISLVEVVK-RKKGKLMSFRIHDLVREFTIKKSKELNFVN 500
Query: 312 ARLSRH--------LARHFSIFN---DIRLRGSDRIDKFLRKLPE--------TSQMSML 352
+H + H N D R+ R F K T ++ +L
Sbjct: 501 VYDEQHSSTTSRREVVHHLMDDNYLCDRRVNTQMRSFLFFGKRRNDITYVETITLKLKLL 560
Query: 353 KVLDLEGCQ--CFQRNQHYLKDICNNILLLKYLSLRRTDVTQLPSEINNLYELEVLDIS 409
+VL+L G C + L D+ ++ L+YL + T V LP I+NL L+ LD S
Sbjct: 561 RVLNLGGLHFICQGYSPWSLPDVIGGLVHLRYLGIADTVVNNLPDFISNLRFLQTLDAS 619
>AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853
Length = 852
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 139/346 (40%), Gaps = 38/346 (10%)
Query: 204 NAKKMIKFSYTDLRKEYKSCFLYLAIFPPGYPVRRSTIVGRWVVEGLITKEDWPSAVHHA 263
N ++ SY +L KSC L L+++P + + +V W+ EG + + SA
Sbjct: 399 NVMSSLQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESG 458
Query: 264 ERCFDTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFITRIAKKQHIV--EARLSRHLA-- 319
E CF L + L+ D +G + + D+V + + IAKK E RHL
Sbjct: 459 EDCFSGLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSFSNPEGLNCRHLGIS 518
Query: 320 ---RHFSIFNDIRLRG------SDRIDKFLRKLPET-SQMSMLKVLDLEGCQCFQRNQHY 369
I + +LRG + ++K L + + L+VLD+ F
Sbjct: 519 GNFDEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFTDCKYLRVLDISK-SIFDAPLSE 577
Query: 370 LKDICNNILLLKYLSLRRTD-VTQLPSEINNLYELEVLDISQTEVPEYATKHIXXXXXXX 428
+ D ++ L LSL T + Q P + +L+ L++LD S +
Sbjct: 578 ILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASYCQ-------------NLK 624
Query: 429 XXAGCIDXXXXXXXXXXXXFRNQAPSSSSVQIPHKIKKMSSMEVLSNVKASWTSR--ELK 486
CI + S P I + +EVL K + ++ +L
Sbjct: 625 QLQPCI------VLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLS 678
Query: 487 DIGKLWQLRKLGVVIDDKDSILKNLLTAISDLCECLRSLSITIFPS 532
++ L LRKLG+ + D I + L ++ +L + L S+SI + S
Sbjct: 679 EVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSK-LMSISINCYDS 723
>AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902
Length = 901
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 198 VNPNSINA-KKMIKFSYTDLRKEYKSCFLYLAIFPPGYPVRRSTIVGRWVVEGLITKEDW 256
++ NS+N+ +++ SY DL + K CFLYLA FP Y ++ T+ W EG+ D
Sbjct: 394 LDDNSLNSVYRILSLSYEDLPTDLKHCFLYLAHFPEDYKIKTRTLYSYWAAEGIY---DG 450
Query: 257 PSAVHHAERCFDTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFITRIAKKQHIVEA---- 312
+ + E + L+ LV + ++K + D++ E AK ++ ++
Sbjct: 451 LTILDSGEDYLEELVRRNLVIAEKSNLSWRLKLCQMHDMMREVCISKAKVENFLQIIKVP 510
Query: 313 ---------------RLSRHLARHFSIFNDIRLRGSDRI-----DKFLRKLPETSQMSML 352
RL+ H + F I + S + D +++ + +L
Sbjct: 511 TSTSTIIAQSPSRSRRLTVHSGKAFHILGHKKKVRSLLVLGLKEDLWIQSASRFQSLPLL 570
Query: 353 KVLDLEGCQCFQRNQHYLKDICNNILLLKYLSLRRTDVTQLPSEINNL 400
+VLDL + F+ + L ++ L++LSL + V+ LPS I NL
Sbjct: 571 RVLDLSSVK-FEGGK--LPSSIGGLIHLRFLSLHQAVVSHLPSTIRNL 615
>AT1G50180.1 | chr1:18584235-18587136 FORWARD LENGTH=858
Length = 857
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 28/233 (12%)
Query: 199 NPNSINAKK------MIKFSYTDLRKEYKSCFLYLAIFPPGYPVRRSTIVGRWVVEGLIT 252
N S N K ++ SY L K CFLY A +P Y V T+V + EG++
Sbjct: 398 NGGSSNGSKNMLVADVLCLSYEYLPPHVKQCFLYFAHYPEDYEVHVGTLVSYCIAEGMVM 457
Query: 253 KEDWPSAVHHAERCFDTLID------MWLVYPSDIGGAGKVKNGIVGDLVHEFITRIAKK 306
A E ++ M +V DI +V + DL+ E + AK+
Sbjct: 458 PVKHTEAGTTVEDVGQDYLEELVKRSMVMVGRRDI-VTSEVMTCRMHDLMREVCLQKAKQ 516
Query: 307 QHIVEARLSR---------HLARHFSIFNDIRLRGSDRIDKFLRKLPETS--QMSMLKVL 355
+ V+ SR L+ + S ++L G + ++ L + S +M +L+VL
Sbjct: 517 ESFVQVIDSRDQDEAEAFISLSTNTSRRISVQLHGGAE-EHHIKSLSQVSFRKMKLLRVL 575
Query: 356 DLEGCQCFQRNQHYLKDICNNILLLKYLSLRRTDVTQLPSEINNLYELEVLDI 408
DLEG Q L D +++ L+ LS+R T+V +L S I NL + LD+
Sbjct: 576 DLEGAQI---EGGKLPDDVGDLIHLRNLSVRLTNVKELTSSIGNLKLMITLDL 625
>AT1G61190.1 | chr1:22557602-22560687 FORWARD LENGTH=968
Length = 967
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 24/220 (10%)
Query: 208 MIKFSYTDLRKEY-KSCFLYLAIFPPGYPVRRSTIVGRWVVEGLITKED-WPSAVHHAER 265
++K+SY L E+ KSCFLY A+FP + T++ +W+ EG I ++ A +
Sbjct: 392 ILKYSYDSLEDEHIKSCFLYCALFPEDDKIDTKTLINKWICEGFIGEDQVIKRARNKGYE 451
Query: 266 CFDTLIDMWLVYPSDIGGAGKVK-NGIVGDLVHEFITRIA------KKQHIVEARLSRHL 318
TLI L+ G VK + ++ D+V E IA K+ ++V AR+ H
Sbjct: 452 MLGTLIRANLL----TNDRGFVKWHVVMHDVVREMALWIASDFGKQKENYVVRARVGLHE 507
Query: 319 ARHFSIFNDIRLRGSDRIDKFLRKLPET---SQMSMLKVLDLEGCQCFQRNQHYLKDICN 375
+ +R R+ + ++ E S+ S L L L+ Q + +++ +
Sbjct: 508 IPKVKDWGAVR-----RMSLMMNEIEEITCESKCSELTTLFLQSNQLKNLSGEFIRYMQK 562
Query: 376 NILLLKYLSLRRTDVTQLPSEINNLYELEVLDISQTEVPE 415
++L LS D +LP +I+ L L+ LD+S T + +
Sbjct: 563 LVVL--DLS-HNPDFNELPEQISGLVSLQYLDLSWTRIEQ 599
>AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927
Length = 926
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 103/510 (20%), Positives = 205/510 (40%), Gaps = 85/510 (16%)
Query: 205 AKKMIKFSYTDLRKEYKSCFLYLAIFPPGYPVRRSTIVGRWVVEGLITKEDWPSAVHHAE 264
+ ++ S+ DL K CFLY ++FP Y ++R ++ W+ + + P AE
Sbjct: 416 VRSIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVE----PIRGVKAE 471
Query: 265 RCFDTLIDMWLVYPSDI-----GGAGKVKNGIVGDLVHEFITRIAKKQHIVEA------- 312
D+ ++ LVY + + G+ K + D++ E ++K + +
Sbjct: 472 EVADSYLNE-LVYRNMLQVILWNPFGRPKAFKMHDVIWEIALSVSKLERFCDVYNDDSDG 530
Query: 313 -----RLSRHLARHFSIFNDI---RLRGSDRIDKFL-----RKLPETSQMSMLKVLDLEG 359
+ + +RH I ++ +R ++ + K+ +++L+ LDLE
Sbjct: 531 DDAAETMENYGSRHLCIQKEMTPDSIRATNLHSLLVCSSAKHKMELLPSLNLLRALDLED 590
Query: 360 CQCFQRNQHYLKDICNNILLLKYLSLRRTDVTQLPSEINNLYELEVLDISQTEVPEYATK 419
+ L D + LKYL+L +T V +LP + L LE L+ +++ E
Sbjct: 591 SSISK-----LPDCLVTMFNLKYLNLSKTQVKELPKNFHKLVNLETLNTKHSKIEELP-- 643
Query: 420 HIXXXXXXXXXAGCIDXXXXXXXXXXXXFRNQAPSSSS------VQIPHKIKKMSSMEVL 473
+ FR S+ ++ KI ++ ++V+
Sbjct: 644 --------------LGMWKLKKLRYLITFRRNEGHDSNWNYVLGTRVVPKIWQLKDLQVM 689
Query: 474 SNVKASWTSRELKDIGKLWQLRKLGVVIDDKDSILKNLLTAISDLCECLRSLSITIFPST 533
A +K++G + QL ++ +V+ ++ DLC+ L + F S
Sbjct: 690 DCFNAE--DELIKNLGCMTQLTRISLVMVRREH--------GRDLCDSLNKIKRIRFLSL 739
Query: 534 KGEGTPSNGDLPQYISHCLKYRPKLLESLCLQGTTQKG-------QLLILFVERFTKLAK 586
T + + P I + +E L L G ++ Q L R ++L +
Sbjct: 740 ----TSIDEEEPLEIDDLIATAS--IEKLFLAGKLERVPSWFNTLQNLTYLGLRGSQLQE 793
Query: 587 KNLEGLGDLPNLCYVRLRHKGYTDGKLTFNEHKFKNLKYF-LVEGNNMRGIKFQKGAAPR 645
+ + LP L ++ + Y +L F + F+NLK +V+ ++ + + GA
Sbjct: 794 NAILSIQTLPRLVWLSF-YNAYMGPRLRFAQ-GFQNLKILEIVQMKHLTEVVIEDGAMFE 851
Query: 646 LEKI-VLSFTNIESL-HGVGDLPKLEELEL 673
L+K+ V + +E + G+ +L L+EL L
Sbjct: 852 LQKLYVRACRGLEYVPRGIENLINLQELHL 881
>AT5G47260.1 | chr5:19189411-19192516 FORWARD LENGTH=949
Length = 948
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 24/212 (11%)
Query: 208 MIKFSYTDLRKEY-KSCFLYLAIFPPGYPVRRSTIVGRWVVEGLITKEDWPSAVHHAERC 266
++K Y ++ E + CFLY A+FP + + +V W+ EG++ KED A
Sbjct: 383 ILKSIYDNMSDEIIRLCFLYCALFPENLDIGKEDLVNYWICEGILAKEDREEAEIQGYEI 442
Query: 267 FDTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFITRIAKKQHIVEARLSRHLARHFSIFN 326
L+ M L+ S G K+ +V E IA + +V H + N
Sbjct: 443 ICDLVRMRLLMESGNGNCVKMHG-----MVREMALWIASEHFVVVGGERIHQMLN---VN 494
Query: 327 DIRL-RGSDRIDKFLRKLPETSQMSMLKVLDLEGCQCFQRNQHYLKDICNNI------LL 379
D R+ R ++ + ++ Q S L L F+RN+H LK I L+
Sbjct: 495 DWRMIRRMSVTSTQIQNISDSPQCSELTTL------VFRRNRH-LKWISGAFFQWMTGLV 547
Query: 380 LKYLSLRRTDVTQLPSEINNLYELEVLDISQT 411
+ LS R ++ +LP E+++L L L++S T
Sbjct: 548 VLDLSFNR-ELAELPEEVSSLVLLRFLNLSWT 578
>AT1G61300.1 | chr1:22607714-22610175 REVERSE LENGTH=763
Length = 762
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 208 MIKFSYTDLRKEY-KSCFLYLAIFPPGYPVRRSTIVGRWVVEGLITKEDWPSAVHHAE-R 265
++K+SY L E+ KSCFLY A+FP + ++ W+ EG I ++ + A +
Sbjct: 280 ILKYSYDSLGDEHIKSCFLYCALFPEDDEIYNEKLIDYWICEGFIGED---QVIKRARNK 336
Query: 266 CFDTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFITRIA------KKQHIVEARLSRHLA 319
++ L + L G V ++ D+V E IA K+ +V AR+ H
Sbjct: 337 GYEMLGTLTLANLLTKVGTEHV---VMHDVVREMALWIASDFGKQKENFVVRARVGLHER 393
Query: 320 RHFSIFNDIRLRGSDRIDKFLRKLPETSQMSMLKVLDLEGCQCFQRNQHYLKDICNNILL 379
+ +R R S +D + ++ S+ S L L L+ Q + +++ + ++L
Sbjct: 394 PEAKDWGAVR-RMS-LMDNHIEEITCESKCSELTTLFLQSNQLKNLSGEFIRYMQKLVVL 451
Query: 380 LKYLSLRRTDVTQLPSEINNLYELEVLDISQTEVPE 415
LS R D +LP +I+ L L+ LD+S T + +
Sbjct: 452 --DLSYNR-DFNKLPEQISGLVSLQFLDLSNTSIKQ 484
>AT5G43470.1 | chr5:17463130-17466658 REVERSE LENGTH=909
Length = 908
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 97/228 (42%), Gaps = 33/228 (14%)
Query: 197 WVNPNSINA-KKMIKFSYTDLRKEYKSCFLYLAIFPPGYPVRRSTIVGRWVVEGLITKED 255
W++ NS+N+ +++ SY DL K CFL LA FP + ++ W EG+ D
Sbjct: 399 WLDDNSLNSVYRILSLSYEDLPTHLKHCFLNLAHFPEDSEISTYSLFYYWAAEGIY---D 455
Query: 256 WPSAVHHAERCFDTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFITRIAKKQHIVEA--- 312
+ E + L+ LV D + + K + D++ E AK+++ ++
Sbjct: 456 GSTIEDSGEYYLEELVRRNLVIADDNYLSWQSKYCQMHDMMREVCLSKAKEENFLQIIID 515
Query: 313 ----------------RLSRHLARHFSIF---NDIRLRG----SDRIDKFLRKLPETSQM 349
RLS H + F I N ++R D ++R +
Sbjct: 516 PTCTSTINAQSPSRSRRLSIHSGKAFHILGHKNKTKVRSLIVPRFEEDYWIRSASVFHNL 575
Query: 350 SMLKVLDLEGCQCFQRNQHYLKDICNNILLLKYLSLRRTDVTQLPSEI 397
++L+VLDL + F+ + L ++ L+YLSL V+ LPS +
Sbjct: 576 TLLRVLDLSWVK-FEGGK--LPCSIGGLIHLRYLSLYEAKVSHLPSTM 620
>AT1G15890.1 | chr1:5461406-5463961 FORWARD LENGTH=852
Length = 851
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 208 MIKFSYTDLRKE-YKSCFLYLAIFPPGYPVRRSTIVGRWVVEGLI-TKEDWPSAVHHAER 265
++KFSY DL+ E K CFLY ++FP Y VR+ ++ W+ EG I ED A +
Sbjct: 392 VLKFSYDDLKDEKVKLCFLYCSLFPEDYEVRKEELIEYWMCEGFIDGNEDEDGANNKGHD 451
Query: 266 CFDTLIDMWLVYPSDIGGAGKVKNGIVGDLVHEFITRIA 304
+L+ L+ ++ KVK + D++ E IA
Sbjct: 452 IIGSLVRAHLLMDGEL--TTKVK---MHDVIREMALWIA 485
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 20,001,028
Number of extensions: 850433
Number of successful extensions: 2827
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 2825
Number of HSP's successfully gapped: 13
Length of query: 935
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 827
Effective length of database: 8,145,641
Effective search space: 6736445107
Effective search space used: 6736445107
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)