BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0639100 Os11g0639100|Os11g0639100
(269 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G66910.1 | chr5:26718338-26721133 REVERSE LENGTH=816 55 4e-08
AT5G17680.1 | chr5:5822999-5827153 FORWARD LENGTH=1295 55 4e-08
AT4G16920.1 | chr4:9519173-9525691 REVERSE LENGTH=1305 55 6e-08
AT4G16950.1 | chr4:9539010-9544340 REVERSE LENGTH=1450 54 6e-08
AT4G16890.1 | chr4:9500506-9505455 REVERSE LENGTH=1302 54 1e-07
AT2G17050.1 | chr2:7410835-7415610 REVERSE LENGTH=1356 53 2e-07
AT5G66900.1 | chr5:26714931-26717757 REVERSE LENGTH=810 52 3e-07
AT5G66890.1 | chr5:26712944-26714383 REVERSE LENGTH=416 52 5e-07
AT3G14460.1 | chr3:4851990-4856264 REVERSE LENGTH=1425 51 8e-07
AT4G33300.1 | chr4:16051162-16054005 REVERSE LENGTH=817 49 3e-06
AT5G45250.1 | chr5:18321914-18326022 REVERSE LENGTH=1218 48 6e-06
AT4G16860.1 | chr4:9488584-9495700 REVERSE LENGTH=1148 48 6e-06
AT4G19050.1 | chr4:10440102-10443786 REVERSE LENGTH=1202 47 8e-06
>AT5G66910.1 | chr5:26718338-26721133 REVERSE LENGTH=816
Length = 815
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 130 GVEKSLENLSISFCEELHASSGCEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLASLK 189
G K L SF E + + + +AL L++++I C++L LP + + SL +L
Sbjct: 626 GSLKKLSFFMCSFGEVFYDTEDIDVSKALSNLQEIDIDYCYDLDELPYWIPEVVSLKTLS 685
Query: 190 IDNCNKLEILPEWLENLPFLQIMCLSGCPILHSIPEG 226
I NCNKL LPE + NL L+++ + C L +PE
Sbjct: 686 ITNCNKLSQLPEAIGNLSRLEVLRMCSCMNLSELPEA 722
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 134 SLENLSISFCEELHASSGCEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLASLKIDNC 193
SL+ LSI+ C +L S E + L RL+ L +C C LS LP+ + LS+L SL I +C
Sbjct: 680 SLKTLSITNCNKL--SQLPEAIGNLSRLEVLRMCSCMNLSELPEATERLSNLRSLDISHC 737
Query: 194 NKLEILPEWLENLPFLQIMCL---SGCPILHSI 223
L LP+ + L L+ + + SGC + S+
Sbjct: 738 LGLRKLPQEIGKLQKLENISMRKCSGCELPDSV 770
>AT5G17680.1 | chr5:5822999-5827153 FORWARD LENGTH=1295
Length = 1294
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%)
Query: 161 LKKLEICGCHELSCLPQGLQHLSSLASLKIDNCNKLEILPEWLENLPFLQIMCLSGCPIL 220
L KL++ C L LP L HL SL SL +D C +LE LP+ L+NL L+ + +SGC +
Sbjct: 741 LVKLDMSDCQRLRTLPSYLGHLVSLKSLNLDGCRRLENLPDTLQNLTSLETLEVSGCLNV 800
Query: 221 HSIPEGLTCSDII 233
+ P T +++
Sbjct: 801 NEFPRVSTSIEVL 813
>AT4G16920.1 | chr4:9519173-9525691 REVERSE LENGTH=1305
Length = 1304
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 54/219 (24%)
Query: 90 ELVIIQCPKLRALH--MEFPSIEKLILWMNN--KMLYSSKEGLRGVEKSLENLSISFCEE 145
E + + C ++ + FPS +L+LW N K L+S+ + V+ +EN S E+
Sbjct: 685 EYLSVDCSRMEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMEN---SDLEK 741
Query: 146 LHASSGCEGLQALDRLKKL-----------------------EICGCHELSCLPQGLQHL 182
L +G Q L RLK++ +IC C L P +Q+
Sbjct: 742 LW-----DGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNA 796
Query: 183 SSLASLKIDNCNKLEILPEWLENLPFLQIMCLSGCPILHSIPE-GLTCSD---------I 232
L L I +C KLE P L NL L+ + L+GCP L + P + CSD I
Sbjct: 797 IKLIYLDISDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEI 855
Query: 233 IVEYCP-NFKEPSG-------MSSVLCSWKAMFLIFIEL 263
+VE C N P+G M + C ++ +L+F+ +
Sbjct: 856 VVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNV 894
>AT4G16950.1 | chr4:9539010-9544340 REVERSE LENGTH=1450
Length = 1449
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 96/219 (43%), Gaps = 54/219 (24%)
Query: 90 ELVIIQCPKLRALH--MEFPSIEKLILWMNN--KMLYSSKEGLRGVEKSLENLSISFCEE 145
E + + C ++ + FPS +L+LW N K L+S+ + V+ +EN S E+
Sbjct: 691 EYLSVDCSRVEGTQGIVYFPSKLRLLLWNNCPLKRLHSNFKVEYLVKLRMEN---SDLEK 747
Query: 146 LHASSGCEGLQALDRLKKL-----------------------EICGCHELSCLPQGLQHL 182
L +G Q L RLK++ +IC C L P +Q+
Sbjct: 748 LW-----DGTQPLGRLKQMFLRGSKYLKEIPDLSLAINLEEVDICKCESLVTFPSSMQNA 802
Query: 183 SSLASLKIDNCNKLEILPEWLENLPFLQIMCLSGCPILHSIPE-GLTCSD---------I 232
L L I +C KLE P L NL L+ + L+GCP L + P + CSD I
Sbjct: 803 IKLIYLDISDCKKLESFPTDL-NLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEI 861
Query: 233 IVEYCP-NFKEPSG-------MSSVLCSWKAMFLIFIEL 263
+VE C N P+G M + C ++ +L+F+ +
Sbjct: 862 VVEDCFWNKNLPAGLDYLDCLMRCMPCEFRPEYLVFLNV 900
>AT4G16890.1 | chr4:9500506-9505455 REVERSE LENGTH=1302
Length = 1301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 12/107 (11%)
Query: 161 LKKLEICGCHELSCLPQGLQHLSSLASLKIDNCNKLEILPEWLENLPFLQIMCLSGCPIL 220
L++L++ GC L LP +Q+ + L L + +C KLE P L NL L+ + L+GCP L
Sbjct: 638 LEELDLVGCKSLVTLPSSIQNATKLIYLDMSDCKKLESFPTDL-NLESLEYLNLTGCPNL 696
Query: 221 HSIPE-GLTCSD---------IIVEYCP-NFKEPSGMSSVLCSWKAM 256
+ P + CSD I+VE C N P+G+ + C + M
Sbjct: 697 RNFPAIKMGCSDVDFPEGRNEIVVEDCFWNKNLPAGLDYLDCLTRCM 743
>AT2G17050.1 | chr2:7410835-7415610 REVERSE LENGTH=1356
Length = 1355
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 25/133 (18%)
Query: 117 NNKMLYSSKEGLRGVEKS-----LENLSISFCEELH---------AS------SGCEGLQ 156
N K LY S G+R V S LE L +S C+ L AS SGC LQ
Sbjct: 532 NLKELYLSGTGIREVTSSIHLSSLEVLDLSNCKRLQNLPMGKGNLASLIKLMLSGCSKLQ 591
Query: 157 ALD----RLKKLEICGCHELSCLPQGLQHLSSLASLKIDNCNKLEILPEWLENLPFLQIM 212
+ LK+L + G + +P + HL+ L +NC KL+ LP + NL L ++
Sbjct: 592 NIQDLPTNLKELYLAGT-SIREVPSSICHLTQLVVFDAENCKKLQDLPMGMGNLISLTML 650
Query: 213 CLSGCPILHSIPE 225
LSGC L SIP+
Sbjct: 651 ILSGCSELRSIPD 663
>AT5G66900.1 | chr5:26714931-26717757 REVERSE LENGTH=810
Length = 809
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 134 SLENLSI---SFCEELHASSGCEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLASLKI 190
SL+ LS+ SF E + + AL +L++++I C++L LP + + SL +L I
Sbjct: 621 SLKKLSLVMCSFGEVFYDTEDIVVSNALSKLQEIDIDYCYDLDELPYWISEIVSLKTLSI 680
Query: 191 DNCNKLEILPEWLENLPFLQIMCLSGCPILHSIPEG 226
NCNKL LPE + NL L+++ L L +PE
Sbjct: 681 TNCNKLSQLPEAIGNLSRLEVLRLCSSMNLSELPEA 716
>AT5G66890.1 | chr5:26712944-26714383 REVERSE LENGTH=416
Length = 415
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 133 KSLENLSISFCEELHASSGCEGL-QALDRLKKLEICGCHELSCLPQGLQHLSSLASLKID 191
KSLE LS+ FC + A + E + + L L+++EI C+ L LP + + SL L +
Sbjct: 228 KSLEKLSLWFCHVVDALNELEDVSETLQSLQEIEIDYCYNLDELPYWISQVVSLKKLSVT 287
Query: 192 NCNKLEILPEWLENLPFLQIMCLSGCPILHSIPEGLTCSD 231
NCNKL + E + +L L+ + LS C L +PE + D
Sbjct: 288 NCNKLCRVIEAIGDLRDLETLRLSSCASLLELPETIDRLD 327
>AT3G14460.1 | chr3:4851990-4856264 REVERSE LENGTH=1425
Length = 1424
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 67/169 (39%), Gaps = 28/169 (16%)
Query: 85 FPRLAELVIIQCPKLRALHMEFPSIEKLILWMNNKMLYSSKEGLRGVEK----------- 133
+P L EL+II C L + P L++ + + E L+
Sbjct: 1115 YPNLHELLIIACHSLESFPGSHPPTTLKTLYIRDCKKLNFTESLQPTRSYSQLEYLFIGS 1174
Query: 134 --------------SLENLSISFCEELHASSGCEGLQALDR--LKKLEICGCHELSCLPQ 177
L +LSI CE S GL DR L+ LEI C L PQ
Sbjct: 1175 SCSNLVNFPLSLFPKLRSLSIRDCESFKTFSIHAGL-GDDRIALESLEIRDCPNLETFPQ 1233
Query: 178 GLQHLSSLASLKIDNCNKLEILPEWLENLPFLQIMCLSGCPILHSIPEG 226
G L+S+ + NC KL+ LPE L L L + + CP + +IP G
Sbjct: 1234 GGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFIIKCPEIETIPGG 1282
>AT4G33300.1 | chr4:16051162-16054005 REVERSE LENGTH=817
Length = 816
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 133 KSLENLSISFCEELHASSGCEGLQALD---RLKKLEICGCHELSCLPQGLQHLSSLASLK 189
K+L +S+ C+ ++ S GL D +L L I C +L LP + L+SL+ L
Sbjct: 628 KNLHKMSLILCK-INKSFDQTGLDVADIFPKLGDLTIDHCDDLVALPSSICGLTSLSCLS 686
Query: 190 IDNCNKLEILPEWLENLPFLQIMCLSGCPILHSIP 224
I NC +L LP+ L L L+I+ L CP L ++P
Sbjct: 687 ITNCPRLGELPKNLSKLQALEILRLYACPELKTLP 721
>AT5G45250.1 | chr5:18321914-18326022 REVERSE LENGTH=1218
Length = 1217
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 147 HASSGCE--GLQALDRLKKLEICGCHELSCLPQGLQHLSSLASLKIDNCNKLEILPEWLE 204
H+S C GL ++L++L + GC L P ++ + LA L + C LE LPE
Sbjct: 669 HSSKLCSLSGLSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSLESLPEM-- 726
Query: 205 NLPFLQIMCLSGCPILHSIP 224
NL L+ + LSGC P
Sbjct: 727 NLISLKTLTLSGCSTFKEFP 746
>AT4G16860.1 | chr4:9488584-9495700 REVERSE LENGTH=1148
Length = 1147
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 161 LKKLEICGCHELSCLPQGLQHLSSLASLKIDNCNKLEILPEWLENLPFLQIMCLSGCPIL 220
L++L + GC L LP +Q+ + L +L + +C KLE P L NL L+ + L+GCP L
Sbjct: 792 LERLYLFGCESLVTLPSSIQNATKLINLDMRDCKKLESFPTDL-NLESLEYLNLTGCPNL 850
Query: 221 HSIPE-GLTCS---------DIIVEYCP-NFKEPSGMSSVLCSWKAM 256
+ P + CS +I VE C N P+G+ + C + M
Sbjct: 851 RNFPAIKMGCSYFEILQDRNEIEVEDCFWNKNLPAGLDYLDCLMRCM 897
>AT4G19050.1 | chr4:10440102-10443786 REVERSE LENGTH=1202
Length = 1201
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 97/232 (41%), Gaps = 42/232 (18%)
Query: 32 LETLQPNQCLKTLEIVAYEGHAFPSWITSTEPYLTSLVEISLEVWEQSSRMNLFPRLAEL 91
LE + C+K I G S++ T+L E+ ++ E S+ L EL
Sbjct: 727 LEVFDVSGCIKLKNINGSFGEM--SYLHEVNLSETNLSELPDKISELSN-------LKEL 777
Query: 92 VIIQCPKLRALHMEFPSIEKLILWMNNKMLYSSKEGLRGVEKSLENLSISFCEELHASSG 151
+I +C KL+ L P++EKL +LE +S C EL G
Sbjct: 778 IIRKCSKLKTL----PNLEKLT--------------------NLEIFDVSGCTELETIEG 813
Query: 152 CEGLQALDRLKKLEICGCHELSCLPQGLQHLSSLASLKIDNCNKLEILPEWLENLPFLQI 211
+ L L K+ + + L LP + LS+L L + NC+KL+ LP LE L L I
Sbjct: 814 --SFENLSCLHKVNLSETN-LGELPNKISELSNLKELILRNCSKLKALPN-LEKLTHLVI 869
Query: 212 MCLSGCPILHSIPEGLTCSDIIVEY---CPNFKEPSGM--SSVLCSWKAMFL 258
+SGC L I E + E N K + S+LCS K + L
Sbjct: 870 FDVSGCTNLDKIEESFESMSYLCEVNLSGTNLKTFPELPKQSILCSSKRIVL 921
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,078,048
Number of extensions: 248552
Number of successful extensions: 1901
Number of sequences better than 1.0e-05: 31
Number of HSP's gapped: 1915
Number of HSP's successfully gapped: 37
Length of query: 269
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 172
Effective length of database: 8,447,217
Effective search space: 1452921324
Effective search space used: 1452921324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)