BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0634800 Os11g0634800|J065093M12
         (60 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03900.1  | chr3:1002975-1004271 REVERSE LENGTH=209             77   2e-15
AT2G14750.1  | chr2:6314128-6315501 FORWARD LENGTH=277             76   4e-15
AT4G39940.1  | chr4:18519787-18521276 FORWARD LENGTH=294           73   3e-14
AT5G67520.1  | chr5:26939342-26940842 FORWARD LENGTH=311           72   8e-14

>AT3G03900.1 | chr3:1002975-1004271 REVERSE LENGTH=209
          Length = 208

 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 40/44 (90%)

Query: 7   VGEVAKLFADAGLICITSLISPYKSDRSACRKLLPNSSFIEVYL 50
           VGEVAKLFADAGLICI SLISPY+ DR ACR+++ NSSFIEV++
Sbjct: 91  VGEVAKLFADAGLICIASLISPYRKDRDACREMIQNSSFIEVFM 134



>AT2G14750.1 | chr2:6314128-6315501 FORWARD LENGTH=277
          Length = 276

 Score = 75.9 bits (185), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 38/44 (86%)

Query: 7   VGEVAKLFADAGLICITSLISPYKSDRSACRKLLPNSSFIEVYL 50
           VGEVAKLFADAG+ICI SLISPY++DR ACR LLP   F+EV++
Sbjct: 162 VGEVAKLFADAGIICIASLISPYRTDRDACRSLLPEGDFVEVFM 205



>AT4G39940.1 | chr4:18519787-18521276 FORWARD LENGTH=294
          Length = 293

 Score = 73.2 bits (178), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/44 (68%), Positives = 37/44 (84%)

Query: 7   VGEVAKLFADAGLICITSLISPYKSDRSACRKLLPNSSFIEVYL 50
           +GEVAKLFAD G+ICI SLISPY+ DR ACR LLP+  F+EV++
Sbjct: 176 IGEVAKLFADVGVICIASLISPYRRDRDACRSLLPDGDFVEVFM 219



>AT5G67520.1 | chr5:26939342-26940842 FORWARD LENGTH=311
          Length = 310

 Score = 71.6 bits (174), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 31/44 (70%), Positives = 38/44 (86%)

Query: 7   VGEVAKLFADAGLICITSLISPYKSDRSACRKLLPNSSFIEVYL 50
           VGEVAKLFAD+G+ICI SLISPY+ +R+ACR LLP   FIEV++
Sbjct: 170 VGEVAKLFADSGIICIASLISPYRIERAACRALLPQGDFIEVFM 213



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.323    0.136    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,230,783
Number of extensions: 36030
Number of successful extensions: 99
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 99
Number of HSP's successfully gapped: 4
Length of query: 60
Length of database: 11,106,569
Length adjustment: 33
Effective length of query: 27
Effective length of database: 10,201,841
Effective search space: 275449707
Effective search space used: 275449707
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 104 (44.7 bits)