BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0629300 Os11g0629300|AK120485
(220 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15790.1 | chr5:5149800-5150964 FORWARD LENGTH=233 176 1e-44
AT5G38895.3 | chr5:15571302-15573315 FORWARD LENGTH=327 167 5e-42
AT3G02290.1 | chr3:459385-460688 FORWARD LENGTH=232 162 1e-40
AT5G41350.1 | chr5:16542026-16543092 REVERSE LENGTH=213 100 4e-22
AT4G00335.1 | chr4:146866-147962 FORWARD LENGTH=191 79 2e-15
AT4G23450.2 | chr4:12241113-12242190 REVERSE LENGTH=209 75 3e-14
AT4G14220.1 | chr4:8196012-8198240 FORWARD LENGTH=372 59 3e-09
AT5G22000.2 | chr5:7277436-7279553 FORWARD LENGTH=376 54 6e-08
AT5G37250.1 | chr5:14750393-14750971 FORWARD LENGTH=193 50 7e-07
AT5G37270.1 | chr5:14757933-14758559 REVERSE LENGTH=209 50 8e-07
AT4G28890.1 | chr4:14256437-14257735 REVERSE LENGTH=433 50 1e-06
AT3G20395.1 | chr3:7112020-7113792 REVERSE LENGTH=224 49 2e-06
AT2G25410.1 | chr2:10814470-10815917 FORWARD LENGTH=378 48 3e-06
AT4G05350.1 | chr4:2726910-2727530 REVERSE LENGTH=207 48 4e-06
AT5G37230.1 | chr5:14735154-14735780 FORWARD LENGTH=209 48 4e-06
AT4G35840.1 | chr4:16981083-16982266 FORWARD LENGTH=237 48 5e-06
AT1G17970.1 | chr1:6185032-6187202 FORWARD LENGTH=369 47 5e-06
AT1G26800.1 | chr1:9285576-9286190 REVERSE LENGTH=205 47 5e-06
AT5G42940.1 | chr5:17216649-17219171 REVERSE LENGTH=692 47 6e-06
AT2G20030.1 | chr2:8647813-8648985 FORWARD LENGTH=391 47 7e-06
AT5G54990.1 | chr5:22317505-22318185 FORWARD LENGTH=227 47 7e-06
AT3G55530.1 | chr3:20595300-20597188 REVERSE LENGTH=274 47 7e-06
AT1G73760.1 | chr1:27739366-27741161 REVERSE LENGTH=368 47 8e-06
AT1G74620.1 | chr1:28028252-28029001 FORWARD LENGTH=250 47 8e-06
AT1G28040.1 | chr1:9773580-9774910 REVERSE LENGTH=300 47 8e-06
>AT5G15790.1 | chr5:5149800-5150964 FORWARD LENGTH=233
Length = 232
Score = 176 bits (445), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 139/236 (58%), Gaps = 22/236 (9%)
Query: 1 MGALCSCLQADYSDHHGHHASPALGGCMCLRCFTQQLINAYTVLFRAGTVHAVSQSIEAT 60
MG + SC D + + + +S C C RC +N Y LFR G ++ S++AT
Sbjct: 1 MGCVSSCFGVDDFEDYPNPSSSVNRSCPCPRCLVNNFLNLYISLFRRGETRSLPSSLQAT 60
Query: 61 PVD-SSESSFD-----TYRSPPRPLPYD-DPRFSPPQRDWLVSRHGP-SCHSPEESEPLR 112
V ++ +S+D T+ S PRPLPYD DPR+ +RD LVSR S HS EE+EPLR
Sbjct: 61 NVSIATSTSYDNFMSNTFHSTPRPLPYDADPRYFRSRRDSLVSRRDKGSSHSHEEAEPLR 120
Query: 113 ANDDEEMETPSS-----THKSSKTNYDTKMKRSSST----HGEKLPTKEPGNYFTYFSPS 163
++ D + E+ S +K + D+K + S S+ + T G Y T
Sbjct: 121 SDADVDSESFSVEGSKWANKLIISGEDSKEEFSRSSRRILQSRTMSTSNEGLYIT----- 175
Query: 164 AEDEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDET 219
++DEDVCPTCLE+Y SENP+IV +CSHHFHL CIYEWMERSE CPVCGK MEF ET
Sbjct: 176 SDDEDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFHET 231
>AT5G38895.3 | chr5:15571302-15573315 FORWARD LENGTH=327
Length = 326
Score = 167 bits (422), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/233 (42%), Positives = 130/233 (55%), Gaps = 31/233 (13%)
Query: 1 MGALCSCLQADYSDHHGHHASPALGGCMCLRCFTQQLINAYTVLFRAGTVHAVSQSIEAT 60
MGA C C Q D + + + + C CL CF Q ++ Y LF G +H + ++E
Sbjct: 106 MGAFCCCFQVDLFESYVNPNTSITRNCPCLNCFLQSFMDLYASLFSRGGMHPIPSTVETA 165
Query: 61 PVDSSESSFD-----TYRSPPRPLPYD-DPRFSPPQRDWLVSRHGPSCHSPEESEPLRAN 114
V +S ++ D Y SPP PLPYD DPR+ + S HS EESEPLR
Sbjct: 166 TVMNSTTALDDSLSSVYHSPPTPLPYDADPRYFRFVKG--------SSHSGEESEPLRG- 216
Query: 115 DDEEMETPS---STHKSSKTNYDTKMKR------SSSTHGEKLPTKEPGNYFTYFSPSAE 165
D EM + + K SK++ + K S+ T + +P E Y++ S +
Sbjct: 217 -DTEMSSEALGDGGAKWSKSDSEDGSKEVYTKGSSTFTKSKTMPGIE-----VYYADS-D 269
Query: 166 DEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 218
DED+CPTCL+DYT ENP+I+ +CSHHFHL CIYEWMERSE CPVCGK M FDE
Sbjct: 270 DEDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAFDE 322
>AT3G02290.1 | chr3:459385-460688 FORWARD LENGTH=232
Length = 231
Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 138/237 (58%), Gaps = 25/237 (10%)
Query: 1 MGALCSCLQADYSDHHGHHASPALGGCMCLRCFTQQLINAYTVLFRAGTVHAVSQSIEAT 60
MG + SC + + D + + S C C+RC +N Y +FR G ++ S++AT
Sbjct: 1 MGCVSSCFRVEDIDEYMNPNSSVYRNCPCIRCLAHNFLNLYISVFRRGETRSLPSSVQAT 60
Query: 61 PVDSSESSFDTY-----RSPPRPLPYD-DPRFSPPQRDWLVSRHGPSCHSPEESEPLRAN 114
+S SS D + RS PRPLPYD DPR+ R + R S HS EE EPLR++
Sbjct: 61 ASITSSSSHDNFLSEAFRSTPRPLPYDADPRYF---RSLVSRREKGSSHSHEEVEPLRSD 117
Query: 115 DDEEMET------PSSTHKSSKTNYDTKMKRSSSTHGEKLPTKEPG------NYFTYFSP 162
D + E+ + +KS+ ++ D+K + SS + L ++ N +
Sbjct: 118 SDADSESFGVGGCKWANNKSTLSDKDSKEEYSSKSSLRILRSRSKSIMADSENMYIL--- 174
Query: 163 SAEDEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDET 219
+EDEDVCPTCLE+YTSENP+IV +CSHHFHL CIYEWMERSE CPVCGK MEF+ET
Sbjct: 175 -SEDEDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVCGKVMEFNET 230
>AT5G41350.1 | chr5:16542026-16543092 REVERSE LENGTH=213
Length = 212
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 81/174 (46%), Gaps = 7/174 (4%)
Query: 49 TVHAVSQSIEATPVDSSESSFDTYRSPPRPLPYDDPRFSPPQRDWLVSRHGPSCHSPEES 108
T A+S + + SS D Y PP P P+D P PQ S +C E
Sbjct: 41 TSSAISTGVVVVDTNLETSSPDAYIPPPLPTPFDVP-IGIPQTP--ASGEEATCVDIREV 97
Query: 109 EPLRANDDEEMETPSSTHKSSKTN---YDTKMKRSSSTHGEKLPTKEPGNYFTYFSPSAE 165
AN + ET T +T K + E +P F P E
Sbjct: 98 SVDSANTESAQETVDGITLGVPTTCSHKETDSKIQTEIDLESTEEIDPKLSKAVFIPIEE 157
Query: 166 DEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDET 219
+ED CP CLE+Y ENP++V +C HHFHL CI EWMERSE CPVC K+M FD T
Sbjct: 158 EED-CPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEMVFDST 210
>AT4G00335.1 | chr4:146866-147962 FORWARD LENGTH=191
Length = 190
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 165 EDEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 218
E+ED CP C EDY ENPR+ +C H FHL C+ EW+ERS+ CP+C K++ FD+
Sbjct: 134 EEEDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187
>AT4G23450.2 | chr4:12241113-12242190 REVERSE LENGTH=209
Length = 208
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 165 EDEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDET 219
E D CP CLE+Y +NP+++ +C H FHL CI WMERSEACPVC K++ E+
Sbjct: 154 EAIDECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVCDKELVLTES 208
>AT4G14220.1 | chr4:8196012-8198240 FORWARD LENGTH=372
Length = 371
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 167 EDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVC 210
+D C CLE +T ++P V C H +HL CI EW +RS+ CP+C
Sbjct: 43 DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPIC 86
>AT5G22000.2 | chr5:7277436-7279553 FORWARD LENGTH=376
Length = 375
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 167 EDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDETT 220
+D C CLE + +P + C H +HL CI EW +RS CP+C + + + T
Sbjct: 30 DDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPT 83
>AT5G37250.1 | chr5:14750393-14750971 FORWARD LENGTH=193
Length = 192
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 165 EDEDVCPTCLEDYT---SENPRIVMQCSHHFHLGCIYEWMERSEACPVCGK 212
E+E C CLED++ +N ++ C H FH CI+EW++R +CP+C +
Sbjct: 132 EEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCRR 182
>AT5G37270.1 | chr5:14757933-14758559 REVERSE LENGTH=209
Length = 208
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 165 EDEDVCPTCLEDYT---SENPRIVMQCSHHFHLGCIYEWMERSEACPVCGK 212
E+E C CLED++ +N ++ C H FH CI+EW++R +CP+C +
Sbjct: 148 EEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCRR 198
>AT4G28890.1 | chr4:14256437-14257735 REVERSE LENGTH=433
Length = 432
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 157 FTYFSPSAEDEDVCPTCLEDYTS-ENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKME 215
F+ S + D C CL + S E R++ +C H FH+GCI +W+E+ CP+C ++
Sbjct: 111 FSALKGSKQGLD-CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVS 169
Query: 216 FDE 218
+E
Sbjct: 170 MEE 172
>AT3G20395.1 | chr3:7112020-7113792 REVERSE LENGTH=224
Length = 223
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 170 CPTCLEDYT-SENPRIVMQCSHHFHLGCIYEWMERSEACPVC 210
C CL+D+ E R + +C H FH+ CI EW+ R E CP+C
Sbjct: 171 CSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQETCPIC 212
>AT2G25410.1 | chr2:10814470-10815917 FORWARD LENGTH=378
Length = 377
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 162 PSAEDEDVCPTCLEDY-TSENPRIVMQCSHHFHLGCIYEWMERSEACPVC 210
P+ ++ VCP CL +Y T E R + +C H FH CI W++ +CPVC
Sbjct: 319 PTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVC 368
>AT4G05350.1 | chr4:2726910-2727530 REVERSE LENGTH=207
Length = 206
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 170 CPTCLEDYTSE-NPRIV--MQCSHHFHLGCIYEWMERSEACPVC 210
C CLE S PR V M CSH FH GC+ EW++R CP+C
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLC 200
>AT5G37230.1 | chr5:14735154-14735780 FORWARD LENGTH=209
Length = 208
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 165 EDEDVCPTCLEDYT---SENPRIVMQCSHHFHLGCIYEWMERSEACPVCGK 212
E+E C C+ED++ +N ++ C H FH CI++W++R +CP+C +
Sbjct: 148 EEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLCRR 198
>AT4G35840.1 | chr4:16981083-16982266 FORWARD LENGTH=237
Length = 236
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 22/200 (11%)
Query: 23 ALGGCMCLRCFTQQLINAYT--VLFRAGTVHAVSQSIEATPVDSSESSFDTYRSPPR--- 77
AL G + L T LI T R V A+S ++ + V ESS ++S
Sbjct: 51 ALVGTL-LGALTGALIGQETESGFIRGAAVGAISGAVFSIEV--FESSLVLWKSNESRFG 107
Query: 78 -PLPYDDPRFSPPQRDWLVSRHGPSCHSPEESEPLRANDDEEMETPSSTHKSSKTNYDTK 136
L D S + R GP+ S +S+ M ST + + +DT
Sbjct: 108 CLLYLIDVIVSLISGRLVRERIGPAMLSAVQSQ---------MGAVDSTFEELSSIFDTG 158
Query: 137 MKRS-SSTHGEKLPTKEPGNYFTYFSPSAEDEDVCPTCLEDY-TSENPRIVMQCSHHFHL 194
+ + +K+P + ++ ++D C CL+D+ E R + C H FHL
Sbjct: 159 GSKGLTGDLVDKIPKIKITGKNNL--DASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHL 216
Query: 195 GCIYEWMERSEACPVCGKKM 214
CI W+ R +CP+C + +
Sbjct: 217 PCIDNWLFRHGSCPMCRRDL 236
>AT1G17970.1 | chr1:6185032-6187202 FORWARD LENGTH=369
Length = 368
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 170 CPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGK 212
C C ++Y E+ + C H FH+ C+ +W+ R ACPVC K
Sbjct: 320 CSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKK 362
>AT1G26800.1 | chr1:9285576-9286190 REVERSE LENGTH=205
Length = 204
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 167 EDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFD 217
E C CLE++ SE M C H FH GCI +W+ +CPVC +M D
Sbjct: 110 EGECVICLEEWKSEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160
>AT5G42940.1 | chr5:17216649-17219171 REVERSE LENGTH=692
Length = 691
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 163 SAEDEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVC 210
S +D + C C E+YT ++C H FH CI EW+++ CP+C
Sbjct: 630 SPQDAEPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPIC 677
>AT2G20030.1 | chr2:8647813-8648985 FORWARD LENGTH=391
Length = 390
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 170 CPTCLEDYTS-ENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDE 218
C CL + E R++ +C H FH+GCI +W+E+ CP+C ++ ++
Sbjct: 124 CSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIED 173
>AT5G54990.1 | chr5:22317505-22318185 FORWARD LENGTH=227
Length = 226
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 170 CPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKK 213
CP CL + +S R+ + CSH FH CI W++++ +CP+C K
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICRTK 217
>AT3G55530.1 | chr3:20595300-20597188 REVERSE LENGTH=274
Length = 273
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 23/46 (50%)
Query: 165 EDEDVCPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVC 210
EDE C CLE T + C H FH GCI W+ + CPVC
Sbjct: 206 EDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVC 251
>AT1G73760.1 | chr1:27739366-27741161 REVERSE LENGTH=368
Length = 367
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 170 CPTCLEDYTSENPRIVMQCSHHFHLGCIYEWMERSEACPVCGKKMEFDET 219
C C ++Y +++ ++C H FH+ C+ +W+ R +CPVC K M ++++
Sbjct: 319 CIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVC-KTMAYNKS 367
>AT1G74620.1 | chr1:28028252-28029001 FORWARD LENGTH=250
Length = 249
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 157 FTYFSPSAEDEDVCPTCLEDYTSENPRIVMQ--CSHHFHLGCIYEWMERSEACPVC 210
+ Y + + +E+ C C+EDY E IV + C H FH CI +W++ + CP+C
Sbjct: 170 YNYLNVATTEENGCAICMEDYI-EGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLC 224
>AT1G28040.1 | chr1:9773580-9774910 REVERSE LENGTH=300
Length = 299
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 169 VCPTCLEDYTS-ENPRIVMQCSHHFHLGCIYEWMERSEACPVC 210
+CP CL +Y S E R + +C H FH+ CI EW++ +CPVC
Sbjct: 252 ICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVC 294
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.130 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,781,833
Number of extensions: 259308
Number of successful extensions: 1744
Number of sequences better than 1.0e-05: 55
Number of HSP's gapped: 1754
Number of HSP's successfully gapped: 55
Length of query: 220
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 125
Effective length of database: 8,502,049
Effective search space: 1062756125
Effective search space used: 1062756125
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 109 (46.6 bits)