BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0628800 Os11g0628800|Os11g0628800
(613 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16040.1 | chr2:6976017-6977594 FORWARD LENGTH=383 237 1e-62
AT2G06500.1 | chr2:2580718-2583223 REVERSE LENGTH=583 224 1e-58
AT4G10200.1 | chr4:6353172-6355591 FORWARD LENGTH=734 186 3e-47
AT2G19960.1 | chr2:8622215-8622736 FORWARD LENGTH=174 154 1e-37
AT1G35150.1 | chr1:12864158-12866238 REVERSE LENGTH=460 112 8e-25
AT3G29638.1 | chr3:11473584-11475559 FORWARD LENGTH=413 110 3e-24
AT5G35475.1 | chr5:13686252-13687326 REVERSE LENGTH=162 73 5e-13
>AT2G16040.1 | chr2:6976017-6977594 FORWARD LENGTH=383
Length = 382
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 226/385 (58%), Gaps = 45/385 (11%)
Query: 242 MLAEFDPVIQEHVRPITSEETLLHYLDPKIQNELIHLLASAIKSEICQ-LHDGRAVLKVL 300
M+ F+ ++EH+R E H+ K QNEL LLA+ K I + + D + +L
Sbjct: 1 MIGGFNSDMKEHIRRANKGEIHCHFPSHKSQNELTELLANDTKMMILKKIKDAKYFSVIL 60
Query: 301 --------------------------KLSDFNALTFERL-----------YFSEAKGLAN 323
K+ +F LTF + + S+ + L
Sbjct: 61 DSIPDVSRKEQMTFLIRCVDVSTCSPKIEEF-FLTFLHIKDKREYTDNPGHRSDVESLTE 119
Query: 324 NE---LGEYEFIVAIVIWYEVLYAVNLVSKHLQAKDMLIDVAIEKVQGLISFFKGYRETD 380
+E +G +EF+ ++IWY++L AVN+VSK LQ +DM ++VAI ++ GL+++ K Y+ET
Sbjct: 120 SETHGIGGFEFLFGMIIWYDLLAAVNIVSKSLQFEDMDLEVAISQLGGLVTYLKNYKETG 179
Query: 381 FLQALEAAKGIALELDIGTTFRKKREIERKRQFDENPDDTNVATQSAEETFRINYFIPIV 440
F +A + IA+E+ I F K+ +++K+QF E+ + + ++ AEE+FRI+YFI I+
Sbjct: 180 FEKAKVESTQIAIEMKIAPVF-PKKSVKKKKQFVEDVEKID-ESKIAEESFRIDYFINIM 237
Query: 441 DQAISSLTRRFEQYQHYQKNFGFLFTADSLRSLDNTSLKSSYDNLEAALKRDEKSDIDAN 500
DQAI + RFEQ+Q Y++ FGFLF L+ ++ L++S LEA+LK D SD+D
Sbjct: 238 DQAIMCIEIRFEQFQVYEQIFGFLFGVKRLKVAEDDELRTSCMKLEASLKHDVHSDVDGE 297
Query: 501 ELYTELRFLQDFIPKENMGPLEILKFLKRHD-CFPNASIAYRILLTIPVTVASAERXXXX 559
+L+ EL+ L+D +PKE P+E+LKFLK D C+PN IAYRILLTIPV+VA AER
Sbjct: 298 DLFMELKLLKDVLPKEITKPVEVLKFLKIMDSCYPNTWIAYRILLTIPVSVALAERTFSK 357
Query: 560 XXXXXXYLRCTMTQERLNSLAMIAL 584
YLR TM+QERLN LA+I++
Sbjct: 358 LKLIKKYLRSTMSQERLNGLALISV 382
>AT2G06500.1 | chr2:2580718-2583223 REVERSE LENGTH=583
Length = 582
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 228/425 (53%), Gaps = 50/425 (11%)
Query: 227 KLYEDSNGNFLGLIEMLAEFDPVIQEHVRPITSEETLLHYLDPKIQNELIHLLASAIKSE 286
K+ ED NGNFL IEM+AEFD V++EH+R I + E HYL PKIQNELI +LA I+
Sbjct: 166 KIGEDRNGNFLSFIEMIAEFDVVMREHIRKIGAGEIYSHYLSPKIQNELISMLAQEIRLM 225
Query: 287 ICQ-----------------LHDGRAVLKVLKLSDFNALTFERLYFSEAKGLANNELGEY 329
I + + + +++ D ++ + F N++ GE
Sbjct: 226 IMKTIRASKYFSIILDCTPDISHKEQMTILIRCVDISSTPIKVEEFFLKFLEVNDKTGEG 285
Query: 330 EFIVAIVIWYEVLYAVNLVSKHLQAKDMLIDVAIEKVQGLISFFKGYRETDFLQALEAAK 389
F + ++ ++ V H D+ E V+GL K +T + LE+ K
Sbjct: 286 LFSTIQEVLIDMELEIDDVRGHGW------DIFKEMVKGLT--LKSLSQTRWESHLESVK 337
Query: 390 GI--------------ALELDIGTTFRKKREIERK--------RQFDENPDDTNVATQSA 427
I A + D T RK +IE + + ++ D N+ +
Sbjct: 338 AIRFQTPEIRDALLYLAEKTDDPKT-RKAMDIEAEFPVKKKKIIRRKKHFDHGNMKLSTE 396
Query: 428 EETFRINYFIPIVDQAISSLTRRFEQYQHYQKNFGFLFTADSLRSLDNTSLKSSYDNLEA 487
E+ FRINYF+ ++DQA+ SL RFEQ+Q Y++ FGFLF L ++ +L +S NLE+
Sbjct: 397 ED-FRINYFLTLIDQALISLESRFEQFQRYEQTFGFLFDLQKLTYANDENLMASCVNLES 455
Query: 488 ALKRDEKSDIDANELYTELRFLQDFIPKENMGPLEILKFLKR-HDCFPNASIAYRILLTI 546
+LK E SDID +L+ EL+ L++ +P E P+++L FLKR C+PN I++RILLTI
Sbjct: 456 SLKHGEHSDIDGADLFMELKVLREVLPNEVTKPIKVLDFLKRVEGCYPNTWISFRILLTI 515
Query: 547 PVTVASAERXXXXXXXXXXYLRCTMTQERLNSLAMIALENGLLEKINYEHIIEDFISKNT 606
V+VASAER YLR TM+Q+RLN LA++++E +LEKI+Y +++DF KN
Sbjct: 516 LVSVASAERSFSKLKLIKNYLRSTMSQDRLNGLAILSIERAMLEKIDYATVMDDFAGKNA 575
Query: 607 KRMML 611
R++
Sbjct: 576 SRIIF 580
>AT4G10200.1 | chr4:6353172-6355591 FORWARD LENGTH=734
Length = 733
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 186/300 (62%), Gaps = 23/300 (7%)
Query: 316 SEAKGLANNE---LGEYEFIVAIVIWYEVLYAVNLVSKHLQAKDMLIDVAIEKVQGLISF 372
S+A LA +E +G +EF+ +VIWY +L+ +N VSK LQ++++ I++A+ +++GL+S+
Sbjct: 440 SDADCLATSETHRIGGFEFLFGMVIWYNLLFTMNTVSKALQSENIDIELALVQLKGLVSY 499
Query: 373 FKGYRETDFLQALEAAKGIALELDIGTTF--RKKREIERKRQFDEN-PDDTNVATQSAEE 429
+ YRET F +A A IA +DI F ++KR I+RKR FDE +D S EE
Sbjct: 500 LQNYRETGFQEAKAEATLIAESMDIEPKFPVKRKRIIKRKRHFDEEMENDVETELLSEEE 559
Query: 430 TFRINYFIPIVDQAISSLTRRFEQYQHYQKNFGFLFTADSLRSLDNTSLKSSYDNLEAAL 489
F++ RFEQ++ Y + F FLF L+S + LK++ NLE +L
Sbjct: 560 NFKV----------------RFEQFEEYGRIFRFLFDLRKLKSASDDGLKAACINLETSL 603
Query: 490 KRDEKSDIDANELYTELRFLQDFIPKENMGPLEILKFLKRHD-CFPNASIAYRILLTIPV 548
K + SD+D N L+ EL+ L++ +P E +E+L FLK+ + C+PN IA+R++LT+PV
Sbjct: 604 KHGDSSDVDGNHLFLELKVLKELLPTEITKAIEVLNFLKKFEGCYPNTWIAFRVMLTVPV 663
Query: 549 TVASAERXXXXXXXXXXYLRCTMTQERLNSLAMIALENGLLEKINYEHIIEDFISKNTKR 608
+VASAER Y R TM++ERLN+LA++++E L+ +++Y ++ DF +K +R
Sbjct: 664 SVASAERSFSKLKLIKSYSRSTMSEERLNALAILSIERDLVGELDYISLMNDFAAKTARR 723
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 59 RSIENNPRDDQTGTENNAEVQEVLINDTSVEIXXXXXXXXXXXXXSFQPDIFDPRYWDSL 118
RS P ++ T EN+ E + DT V + +I DP W ++
Sbjct: 15 RSTPLKPNENPTSVENDK--AEEICEDTDVNMNTIPECVYSGEKDELL-EITDPANWKNI 71
Query: 119 NPKQIDILAQKGPRRDLSIQKG-PKDRYSRR-FSALFYNRVLSNGEHCDRDWLVYCKELD 176
+ + D L +KGP + + + PK RR FS +Y R + NG+ DR+WL+Y K D
Sbjct: 72 DRELRDFLVEKGPMKRVHEKYAFPKTAGIRRHFSHRYYKREMKNGDKQDRNWLLYSKVSD 131
Query: 177 RVFCFSYKLFTKGHRKGQLANEGYNDWIHLGSRLKEHETSADHVLNMT 224
+V+CF KLF + QL++ G+NDW ++ RL +HETS H++ M+
Sbjct: 132 KVYCFCCKLFGRDQDAMQLSSTGFNDWRNIRIRLSQHETSHRHIVCMS 179
>AT2G19960.1 | chr2:8622215-8622736 FORWARD LENGTH=174
Length = 173
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 118/173 (68%), Gaps = 1/173 (0%)
Query: 440 VDQAISSLTRRFEQYQHYQKNFGFLFTADSLRSLDNTSLKSSYDNLEAALKRDEKSDIDA 499
+DQA+ SL RFEQ+Q Y++ FGFLF L+S + SL +S NL+ AL SDI A
Sbjct: 1 MDQALYSLETRFEQFQRYEQIFGFLFDLKKLQSASDDSLMASCTNLKDALTHGTHSDILA 60
Query: 500 NELYTELRFLQDFIPKENMGPLEILKFLKR-HDCFPNASIAYRILLTIPVTVASAERXXX 558
++L+ EL+ L++ +PKE P+E+L FL++ C+PN+ IAY++LLTIPV+VASAER
Sbjct: 61 SDLFYELKILREALPKEVRRPIEVLDFLQKVEGCYPNSWIAYQVLLTIPVSVASAERSFS 120
Query: 559 XXXXXXXYLRCTMTQERLNSLAMIALENGLLEKINYEHIIEDFISKNTKRMML 611
YLR +M+QERL+ LA++++E L+ ++++E + DF+ K +R+ L
Sbjct: 121 KLKLIKSYLRSSMSQERLSDLAILSIERALVREVDFERLANDFVGKKGRRITL 173
>AT1G35150.1 | chr1:12864158-12866238 REVERSE LENGTH=460
Length = 459
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 132/472 (27%), Positives = 189/472 (40%), Gaps = 155/472 (32%)
Query: 108 DIFDPRYWDSLNPKQIDILAQKG--PRRD--------------------LSIQKGPKDR- 144
+I DP WD +N + D+L +KG R D L KG D
Sbjct: 63 NISDPVNWDDMNMRFRDLLVEKGLATRHDKKGGYLATSGYNDWRNLSKRLKEHKGSHDHI 122
Query: 145 --YSRRF---SALFYNRVLSNG--EHCDRDWLVYCKELDRVFCFSYKLFTKGHRKGQLAN 197
+RR S L N+ + E ++D + + + L R+ K H K LA
Sbjct: 123 TCMTRRAELESRLQKNKTIDKHAQEAINKDNIHWREVLLRIIAL-----VKTHAKNNLAF 177
Query: 198 EGYNDWIHLGSRLKEHETSADHVLNMTICKLYEDSNGNFLGLIEMLAEFDPVIQEHVRPI 257
G N+ K+ +D NGNFL IEM+AEFD V++EH+R I
Sbjct: 178 RGKNE------------------------KVGQDRNGNFLSFIEMIAEFDVVMREHIRRI 213
Query: 258 TSEETLLHYLDPKIQNELIHLLASAIK---------SEICQL---------HDGRAVLKV 299
+ E HYL KIQNELI +L I+ S+ C + H + + +
Sbjct: 214 GAAEIYSHYLSHKIQNELIGILTGEIRLMIMKTIHASKYCSIILDCTPDISHKEQMTMII 273
Query: 300 ---------LKLSDFNALTF--------ERLYFSEAKGLANNEL---------------G 327
K+ +F LTF E L+ + L + EL G
Sbjct: 274 RCVNISSTLTKVEEF-YLTFLEVKDKSSEGLFSKIKEALVDMELEIDDVRGQESETHGIG 332
Query: 328 EYEFIVAIVIWYEVLYAVNLVSKHLQAKDMLIDVAIEKVQGLISFFKGYRETDFLQALEA 387
+E + +++WY++L VN VSK LQ+ D+ IDVAI +++GL E +FL +
Sbjct: 333 VFEILFGMILWYDLLAVVNRVSKTLQSADIDIDVAIIELKGLDMDI----EAEFLVKKKR 388
Query: 388 AKGIALELDIGTTFRKKREIERKRQFDENPDDTNVATQSAEETFRINYFIPIVDQAISSL 447
D E + DEN D S EE FRINYF ++DQA+
Sbjct: 389 TIRRKKHFD-----------EVSEKGDENMD------LSPEEDFRINYFFTLIDQAL--- 428
Query: 448 TRRFEQYQHYQKNFGFLFTADSLRSLDNTSLKSSYDNLEAALKRDEKSDIDA 499
L S + SL +S +LE++LK E SDID
Sbjct: 429 ---------------------KLTSASDESLMASCVHLESSLKHGEHSDIDG 459
>AT3G29638.1 | chr3:11473584-11475559 FORWARD LENGTH=413
Length = 412
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 100/184 (54%), Gaps = 40/184 (21%)
Query: 316 SEAKGLANNE---LGEYEFIVAIVIWYEVLYAVNLVSKHLQAKDMLIDVAIEKVQGLISF 372
S+A LA +E +G +EF+ +VIWY++L+ VN VSK +Q +++ ID A+ +++GL+S+
Sbjct: 265 SDADALATSETHGIGRFEFLFGLVIWYDLLFIVNTVSKVMQIENIAIDTALVQLKGLLSY 324
Query: 373 FKGYRETDFLQALEAAKGIALELDIGTTFRKKREIERKRQFDENPDDTNVATQSAEETFR 432
F+ YRE + + + + L S EE+F+
Sbjct: 325 FRNYREVE-----KHGESVML--------------------------------SEEESFK 347
Query: 433 INYFIPIVDQAISSLTRRFEQYQHYQKNFGFLFTADSLRSLDNTSLKSSYDNLEAALKRD 492
I+YF IVDQAI SL RFEQ++ Y K+FGFL L+ LK+S NLE +LK
Sbjct: 348 IDYFYTIVDQAIVSLQARFEQFEEYGKHFGFLIDLRKLKRETEDGLKASCINLETSLKHG 407
Query: 493 EKSD 496
+ SD
Sbjct: 408 KNSD 411
>AT5G35475.1 | chr5:13686252-13687326 REVERSE LENGTH=162
Length = 161
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 222 NMTIC----KLYEDSNGNFLGLIEMLAEFDPVIQEHVRPITSEETLLHYLDPKIQNELIH 277
N+ C K+ ED NGNFL IE+LA+FDPV+ EH+R + T HYL KIQNEL
Sbjct: 11 NLAFCGSSGKIGEDGNGNFLSFIEILADFDPVMIEHLRRFKTRATRFHYLINKIQNELTA 70
Query: 278 LLASAIKSEICQ 289
LLA+ IK+ I +
Sbjct: 71 LLANEIKAMIIK 82
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 12,132,091
Number of extensions: 488312
Number of successful extensions: 1532
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1520
Number of HSP's successfully gapped: 10
Length of query: 613
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 509
Effective length of database: 8,255,305
Effective search space: 4201950245
Effective search space used: 4201950245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)