BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0616300 Os11g0616300|AK103590
(493 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53860.1 | chr1:20107165-20109458 REVERSE LENGTH=443 250 1e-66
AT1G30320.1 | chr1:10680348-10682852 FORWARD LENGTH=510 93 4e-19
AT1G67590.1 | chr1:25333137-25334472 REVERSE LENGTH=348 90 2e-18
AT2G02170.1 | chr2:556595-558610 REVERSE LENGTH=487 79 4e-15
AT3G61260.1 | chr3:22675403-22676701 REVERSE LENGTH=213 58 1e-08
AT1G45207.2 | chr1:17130703-17133548 REVERSE LENGTH=556 54 2e-07
AT2G45820.1 | chr2:18863147-18864576 REVERSE LENGTH=191 54 2e-07
AT2G41870.1 | chr2:17471119-17472519 REVERSE LENGTH=275 50 4e-06
AT3G57540.1 | chr3:21301623-21302924 REVERSE LENGTH=297 50 4e-06
>AT1G53860.1 | chr1:20107165-20109458 REVERSE LENGTH=443
Length = 442
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/378 (42%), Positives = 206/378 (54%), Gaps = 52/378 (13%)
Query: 119 PATPGRPLLFFNSSSPAHHQLVSARRSVPSKWEDAEKWVRQASSDXXXXXXXXXXKGSKL 178
P TPGR + F+S+ + RR+ PSKW DAEKWV + D K ++
Sbjct: 100 PCTPGRGVFSFSSN------VSGRRRNFPSKWIDAEKWVTSSGHDSPAHSL----KNNQF 149
Query: 179 QEEKRASAVRRSVDADVTALALYTAPA---AEVFLKDKFTDNVE---PSKESFVFRSSYC 232
K V S + VT + + + ++ LKDK + V PS E F+F+ S
Sbjct: 150 DGFKHQVEVVYSEKSRVTEECFHGSVSLSPQDLILKDKLANEVPQILPSTEGFIFKDSD- 208
Query: 233 EPTKNTAAQAVAAGNGIDHRRDIGTEMTPLGSSTTSRCHTPIKSTSPARHNTPASRSGPL 292
+ + AQ + HR D+GTEMTP+GS TTSRCHTP KS+SPARHNTP+ SGPL
Sbjct: 209 KFLRYEEAQ-------VQHR-DMGTEMTPIGSVTTSRCHTPFKSSSPARHNTPSQLSGPL 260
Query: 293 VPYXXXXXXXXQDISDLADCHFAKLDLGAQFDAMLI-----NWXXXXXXXXXXXXXLRHF 347
DIS+ D KL L + +W LRHF
Sbjct: 261 TETKNVI-----DISEFED----KLRLSGSSTSQYCYSVTSHWNSREEEEEEISKSLRHF 311
Query: 348 EASVAAVGEKRGGAGDCR---WED-DDRAKSCIRYQREEAKIQAWINLESAKAEAQSRKL 403
+ E R + + W+D DD+ K C RYQREEAKIQAW+NLE+AKAEAQSRKL
Sbjct: 312 DME----SELRRSVSESKAPLWDDEDDKIKFCQRYQREEAKIQAWVNLENAKAEAQSRKL 367
Query: 404 EVKIQKMRSNLEEKLMRRMTTVHRRAEEWRATAQAQHLQQLKRAAEQVRRAKATSXXXXX 463
EVKIQKMRSNLEEKLM+RM VHRRAE+WRATA+ QH++Q+++AAE R+
Sbjct: 368 EVKIQKMRSNLEEKLMKRMDMVHRRAEDWRATARQQHVEQMQKAAETARKL-----TNRR 422
Query: 464 XXLAGSNASCGCFPCNGS 481
L +SCGC PCN +
Sbjct: 423 GYLVTGRSSCGCLPCNNT 440
>AT1G30320.1 | chr1:10680348-10682852 FORWARD LENGTH=510
Length = 509
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 152/334 (45%), Gaps = 35/334 (10%)
Query: 144 RSVPSKWEDAEKWVRQASSDXXXXXXXXXXKGSKLQEEKRASAVRRSVDADVTALALYTA 203
R +PSKW DAEKW+ + +G+++ R + + + + L +
Sbjct: 175 RQMPSKWNDAEKWIMSRQN----MVMRKNGQGNRIP--VRIVPDNAGYEHNKSRMDLCQS 228
Query: 204 PAAEVFLKDKFTDNVEPSK-----------ESFVFRSSYCEPTKNTAAQAVAAGNGIDH- 251
+ F +KF NV PS +S + +S+ +++ G I
Sbjct: 229 SQVDGF--EKFP-NVVPSAPHPILTQEYGGDSLIDQSTQSNDLADSSHDHTTGGPAIRSV 285
Query: 252 -RRDIGTEMTPLGSSTTSRCHTPIKSTSPARHNT---PASRSGPLVPYXXXXXXXXQDIS 307
RD+GTEMTP+ S SR TP+ +T+P R T P++ G +++S
Sbjct: 286 CMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTPRGGQPEESSMSKNTRRELS 345
Query: 308 D---LADCHFAKLDLGAQFDAMLIN-WXXXXXXXXXXXXXLRHFEASVAAVGEKRGGAGD 363
+ A + LG Q M I W E + EKR A
Sbjct: 346 EEEEKAKTRREIVALGVQLGKMNIAAWASKEEEENKKNNG--DAEEAQKIEFEKRATA-- 401
Query: 364 CRWEDDDRAKSCIRYQREEAKIQAWINLESAKAEAQSRKLEVKIQKMRSNLEEKLMRRMT 423
WE+ +++K RY+REE +IQAW + E AK EA+ R++E K+++M++ E K+M+++
Sbjct: 402 --WEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRIEAKVEQMKAEAEAKIMKKIA 459
Query: 424 TVHRRAEEWRATAQAQHLQQLKRAAEQVRRAKAT 457
+R+EE RA A+A+ + ++A + + + T
Sbjct: 460 LAKQRSEEKRALAEARKTRDAEKAVAEAQYIRET 493
>AT1G67590.1 | chr1:25333137-25334472 REVERSE LENGTH=348
Length = 347
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 150/359 (41%), Gaps = 68/359 (18%)
Query: 119 PATP----GRPLLFFNSSSPAHHQLVSARRSVPSKWEDAEKWVRQASSDXXXXXXXXXXK 174
PATP G ++ +P HH+ + PSKW+DA+KW+
Sbjct: 14 PATPEISNGFEFQKGSNRTPNHHRSTMGK-PAPSKWDDAQKWLSGVGFARGGGGGG---- 68
Query: 175 GSKLQEEKRASAVRRSVDADVTALALYTAPAAEVFLKDKF----------------TDNV 218
K R++ R S D+ +A +A E +D++ T NV
Sbjct: 69 -DKSSHHSRSNKPRNSNADDLRLIA--SASQREREGEDQYVEYDDEEMAAGRPEVETKNV 125
Query: 219 EPSKESFVFRSSYCEPTKNTAAQAVAAGNGIDHRRDIGTEMTPLGSSTTSRCHTPIKSTS 278
+ ES + S PT + V RD+GTEMTP+GS SR TP+++T
Sbjct: 126 D-CGESVWRKESSINPTAVIRSVCV---------RDMGTEMTPIGSQEPSRTATPVRAT- 174
Query: 279 PARHNTPASRSGPLVPYXXXXXXXXQDISDLADCHFAKLDLGAQFDAMLINWXXXXXXXX 338
TP RS P S + ++ + + N
Sbjct: 175 -----TPVGRSPVTSPVRA---------SQRGEAVGVVMETVTEVRRVESNNSEKVNGFV 220
Query: 339 XXXXXLRHFEASVAAVGEKRGGAGDCRWEDDDRAKSCIRYQREEAKIQAWINLESAKAEA 398
+ EA A W++ +RAK RY+REE KIQAW N E KAE
Sbjct: 221 ESKKAMSAMEARAMA------------WDEAERAKFMARYKREEVKIQAWENHEKRKAEM 268
Query: 399 QSRKLEVKIQKMRSNLEEKLMRRMTTVHRRAEEWRATAQAQHLQQLKRAAEQ---VRRA 454
+ +K+EVK ++M++ EEKL ++ R AEE RA A+A+ ++ + +E+ +RR+
Sbjct: 269 EMKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRS 327
>AT2G02170.1 | chr2:556595-558610 REVERSE LENGTH=487
Length = 486
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 32/219 (14%)
Query: 253 RDIGTEMTPLGSSTTSRCHTPIKSTSP------------ARHNTPASRSGPLVPYXXXXX 300
RD+GTEMTP+ S SR TPI++T+P R + + S +
Sbjct: 266 RDMGTEMTPIASQEPSRNGTPIRATTPIRSPISSEPSSPGRQASASPMSNKELSEKELQM 325
Query: 301 XXXQDISDLADCHFAKLDLGAQFDAMLINWXXXXXXXXXXXXXLRHFEASV---AAVGEK 357
++I L K ++ A W L+ +AS+ +V E
Sbjct: 326 KTRREIMVLG-TQLGKFNIAA--------WASKEDEDKDASTSLKT-KASLQTSKSVSEA 375
Query: 358 RGGAGDCRWEDDDRAKSCIRYQREEAKIQAWINLESAKAEAQSRKLEVKIQKMRSNLEEK 417
R A WE+ ++AK R++REE KIQAW N + AK+EA+ +K EVK+++++ +++
Sbjct: 376 RATA----WEEAEKAKHMARFRREEMKIQAWENHQKAKSEAEMKKTEVKVERIKGRAQDR 431
Query: 418 LMRRMTTVHRRAEEWRATAQAQHLQQ---LKRAAEQVRR 453
LM+++ T+ R+AEE RA A+A+ Q ++ AEQ+RR
Sbjct: 432 LMKKLATIERKAEEKRAAAEAKKDHQAAKTEKQAEQIRR 470
>AT3G61260.1 | chr3:22675403-22676701 REVERSE LENGTH=213
Length = 212
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
Query: 366 WEDDDRAKSCIRYQREEAKIQAWINLESAKAEAQSRKLEVKIQKMRSNLEEKLMRRMTTV 425
WE+ +++K+ + +++ A + AW N + A EAQ +K+E +++K ++ E++ ++ +
Sbjct: 110 WEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAI 169
Query: 426 HRRAEEWRATAQAQHLQQLKRAAEQVRRAKATSXXXXXXXLAGSNASCGCF 476
H+ AEE RA +A+ + + +A E + +AT A+CGCF
Sbjct: 170 HKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIV--------PKATCGCF 212
>AT1G45207.2 | chr1:17130703-17133548 REVERSE LENGTH=556
Length = 555
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 5/58 (8%)
Query: 381 EEAKIQAWINLESAKAEAQSRKLE-----VKIQKMRSNLEEKLMRRMTTVHRRAEEWR 433
EEA+I +W NL+ AKAEA RKLE +K++K RS+ EK+MR++ + +RAEE R
Sbjct: 459 EEARIISWENLQKAKAEAAIRKLEKYFPQMKLEKKRSSSMEKIMRKVKSAEKRAEEMR 516
>AT2G45820.1 | chr2:18863147-18864576 REVERSE LENGTH=191
Length = 190
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Query: 366 WEDDDRAKSCIRYQREEAKIQAWINLESAKAEAQSRKLEVKIQKMRSNLEEKLMRRMTTV 425
WE+ +++K+ R Q++ + + AW N + A EAQ RK+E K++K ++ EK+ ++ +
Sbjct: 88 WEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAI 147
Query: 426 HRRAEEWRATAQAQHLQQLKRAAEQVRRAKATSXXXXXXXLAGSNASCGCF 476
H+ AEE RA +A+ ++L +A E + +AT A+CGCF
Sbjct: 148 HKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVV--------PKATCGCF 190
>AT2G41870.1 | chr2:17471119-17472519 REVERSE LENGTH=275
Length = 274
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%)
Query: 366 WEDDDRAKSCIRYQREEAKIQAWINLESAKAEAQSRKLEVKIQKMRSNLEEKLMRRMTTV 425
W+ AK R++RE+A I W N + KA + +K+E K+++ ++ EK +
Sbjct: 170 WQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKAKAMEKTQNNVAKA 229
Query: 426 HRRAEEWRATAQAQHLQQLKRAAE 449
R+AEE RATA+A+ ++ + E
Sbjct: 230 QRKAEERRATAEAKRGTEVAKVVE 253
>AT3G57540.1 | chr3:21301623-21302924 REVERSE LENGTH=297
Length = 296
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 366 WEDDDRAKSCIRYQREEAKIQAWINLESAKAEAQSRKLEVKIQKMRSNLEEKLMRRMTTV 425
W+ AK R++R++A I W+N + +A + +K+E K++ R+ EK ++
Sbjct: 192 WQTAKVAKINNRFKRQDAVINGWLNEQVHRANSWMKKIERKLEDRRAKAMEKTQNKVAKA 251
Query: 426 HRRAEEWRATAQAQHLQQLKRAAE 449
R+AEE RATA+ + ++ R E
Sbjct: 252 QRKAEERRATAEGKRGTEVARVLE 275
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.126 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,289,089
Number of extensions: 273453
Number of successful extensions: 916
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 905
Number of HSP's successfully gapped: 12
Length of query: 493
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 390
Effective length of database: 8,282,721
Effective search space: 3230261190
Effective search space used: 3230261190
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)