BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os11g0614900 Os11g0614900|AK072924
         (277 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44250.1  | chr5:17823876-17825620 REVERSE LENGTH=404          229   9e-61
AT2G15695.1  | chr2:6834194-6836336 REVERSE LENGTH=421            207   6e-54

>AT5G44250.1 | chr5:17823876-17825620 REVERSE LENGTH=404
          Length = 403

 Score =  229 bits (585), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 102/175 (58%), Positives = 136/175 (77%)

Query: 63  MFAWLSSQERQVRAYVELYAALGWACLVCHSEFLTLFFPDKAAMLADRVLAELVKELKVR 122
           +FAW+SS+ER ++ +V+LY++L W  LVCHS+FL +F PDKAA LA  V++ELVKELK +
Sbjct: 26  VFAWMSSEERNLKNHVDLYSSLLWDSLVCHSQFLNMFLPDKAADLASNVVSELVKELKAK 85

Query: 123 PVPVVFASFSGGPKGCTYKVLQLIERRCEGQLSLEEYQLVRDCLCGQMYDSSPVDFVSDL 182
           PVP+VFASFSGGP  C YKVLQ++E  CE  L+ ++ +LVR+C+ G +YDS PVDF SDL
Sbjct: 86  PVPLVFASFSGGPNACMYKVLQILEGTCETGLNPDDCRLVRNCISGFIYDSCPVDFTSDL 145

Query: 183 GTRFLLHPSVLKMSQPPRILSWMTRGIASGLDTLFIGKFEAQRAEYWDTLYSSVV 237
           G R  +HP+ LKMS PP+   W   GIAS LD +F+ +FE+QRAEYW TLYS+++
Sbjct: 146 GARLAVHPTTLKMSSPPKPFVWAANGIASSLDYVFLNRFESQRAEYWQTLYSTII 200



>AT2G15695.1 | chr2:6834194-6836336 REVERSE LENGTH=421
          Length = 420

 Score =  207 bits (526), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 93/174 (53%), Positives = 128/174 (73%)

Query: 63  MFAWLSSQERQVRAYVELYAALGWACLVCHSEFLTLFFPDKAAMLADRVLAELVKELKVR 122
           +F W S  E Q+  +V+LY++LGW  LVC ++FLT  +P+ A  LA  +L+ELV+ELK R
Sbjct: 34  IFVWSSINENQLMNFVDLYSSLGWNSLVCRADFLTAVYPEMALSLAFHLLSELVEELKSR 93

Query: 123 PVPVVFASFSGGPKGCTYKVLQLIERRCEGQLSLEEYQLVRDCLCGQMYDSSPVDFVSDL 182
           P PV+F +FSG PK C YKVLQ+I   CE Q+  ++ QLVR CL G +YDS P+DF SDL
Sbjct: 94  PCPVIFLAFSGAPKACMYKVLQVIMDDCEAQIHPDDSQLVRTCLSGHVYDSGPLDFTSDL 153

Query: 183 GTRFLLHPSVLKMSQPPRILSWMTRGIASGLDTLFIGKFEAQRAEYWDTLYSSV 236
             +F LHP++ +MS P R++SW+ +GI+SGLD L++ +FE+QR+EYW  LYSSV
Sbjct: 154 NVKFALHPTIRRMSGPSRLVSWVAKGISSGLDGLYLTRFESQRSEYWQALYSSV 207



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.327    0.138    0.451 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,177,573
Number of extensions: 186916
Number of successful extensions: 534
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 534
Number of HSP's successfully gapped: 2
Length of query: 277
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 180
Effective length of database: 8,447,217
Effective search space: 1520499060
Effective search space used: 1520499060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 111 (47.4 bits)