BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0602300 Os11g0602300|AK103473
(314 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G74520.1 | chr1:28008109-28009156 REVERSE LENGTH=178 212 2e-55
AT1G69700.1 | chr1:26220337-26221663 FORWARD LENGTH=185 175 4e-44
AT5G62490.1 | chr5:25090206-25091345 FORWARD LENGTH=168 158 3e-39
AT2G42820.1 | chr2:17817460-17818301 REVERSE LENGTH=159 130 6e-31
AT4G24960.1 | chr4:12828060-12828982 FORWARD LENGTH=136 117 6e-27
AT5G50720.1 | chr5:20633442-20634502 REVERSE LENGTH=117 116 1e-26
AT4G36720.1 | chr4:17307769-17309668 FORWARD LENGTH=201 72 3e-13
AT5G42560.1 | chr5:17015573-17016969 FORWARD LENGTH=297 63 2e-10
AT1G75700.1 | chr1:28423956-28424931 FORWARD LENGTH=178 63 3e-10
AT1G19950.1 | chr1:6925043-6926527 FORWARD LENGTH=316 61 7e-10
AT2G36020.1 | chr2:15123424-15125140 REVERSE LENGTH=259 58 8e-09
>AT1G74520.1 | chr1:28008109-28009156 REVERSE LENGTH=178
Length = 177
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 95/146 (65%), Positives = 123/146 (84%)
Query: 2 GSGSLLKVLAKNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFEL 61
G+G+ LKVL +NFDVLAGP+V+L YPLYASV+AIET+S DD+QWLTYWV+YSL+TL EL
Sbjct: 4 GAGNFLKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIEL 63
Query: 62 TFASIIQWLPFWPSMKLIFICWLVLPYFNGAAFVYQNYVRPMFVKHQMVNIWYVPQKKGL 121
TFA +I+WLP W MKLI CWLV+PYF+GAA+VY+++VRP+FV + +NIWYVP+K +
Sbjct: 64 TFAKLIEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVRPVFVNPRSINIWYVPKKMDI 123
Query: 122 FGKSDDFLTALDKFIEENGPEALKKL 147
F K DD LTA +K+I ENGP+A +K+
Sbjct: 124 FRKPDDVLTAAEKYIAENGPDAFEKI 149
>AT1G69700.1 | chr1:26220337-26221663 FORWARD LENGTH=185
Length = 184
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 111/151 (73%), Gaps = 5/151 (3%)
Query: 2 GSGSLLKVLAKNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFEL 61
G ++L+VL KNFDVLA PLV L YPLYASVKAIET+S +D+QWLTYWV+Y+LI+LFEL
Sbjct: 6 GDDNVLQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISLFEL 65
Query: 62 TFASIIQWLPFWPSMKLIFICWLVLPYFNGAAFVYQNYVRPMFVKHQMVN--IWYVPQKK 119
TF+ ++W P WP MKL ICWLVLP FNGA +Y++++RP + Q IWYVP KK
Sbjct: 66 TFSKPLEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIRPFYRDPQRATTKIWYVPHKK 125
Query: 120 GLF---GKSDDFLTALDKFIEENGPEALKKL 147
F DD LTA +K++E++G EA +++
Sbjct: 126 FNFFPKRDDDDILTAAEKYMEQHGTEAFERM 156
>AT5G62490.1 | chr5:25090206-25091345 FORWARD LENGTH=168
Length = 167
Score = 158 bits (400), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 98/142 (69%), Gaps = 5/142 (3%)
Query: 2 GSGSLLKVLAKNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFEL 61
G GSL+KV+ KNFDV+AGP+++L YPLYASV+AIE++S DD+QWLTYW +YSLI LFEL
Sbjct: 4 GIGSLVKVIFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFEL 63
Query: 62 TFASIIQWLPFWPSMKLIFICWLVLPYFNGAAFVYQNYVRPMFVKHQMVNIWYVPQKKGL 121
TF +++W+P +P KL WLVLP NGAA++Y++YVR + VN+WYVP K
Sbjct: 64 TFFRLLEWIPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFLLSPHTVNVWYVPAK--- 120
Query: 122 FGKSDDFLTALDKFIEENGPEA 143
K DD KF N A
Sbjct: 121 --KDDDLGATAGKFTPVNDSGA 140
>AT2G42820.1 | chr2:17817460-17818301 REVERSE LENGTH=159
Length = 158
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 60/100 (60%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Query: 10 LAKNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQW 69
+AK FD L GP V L YPLYAS +AIE+ + +DDQQWLTYW++YSLIT+FEL+ ++ W
Sbjct: 7 IAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSVWRVLAW 66
Query: 70 LPFWPSMKLIFICWLVLPYFNGAAFVYQNYVRPMFVKHQM 109
LPFWP +KL+F WLVLP F+GAA++Y N+VR +VK M
Sbjct: 67 LPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQ-YVKIGM 105
>AT4G24960.1 | chr4:12828060-12828982 FORWARD LENGTH=136
Length = 135
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 70/94 (74%)
Query: 18 AGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQWLPFWPSMK 77
AGP+V L YPLYASV A+E+ + VDD+QWL YW++YS ++L EL S+I+W+P W ++K
Sbjct: 15 AGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELILQSLIEWIPIWYTVK 74
Query: 78 LIFICWLVLPYFNGAAFVYQNYVRPMFVKHQMVN 111
L+F+ WLVLP F GAAF+Y VR F KH ++
Sbjct: 75 LVFVAWLVLPQFQGAAFIYNRVVREQFKKHGVLR 108
>AT5G50720.1 | chr5:20633442-20634502 REVERSE LENGTH=117
Length = 116
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 17 LAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQWLPFWPSM 76
LAGP+V L YPLYASV AIE+ S VDD+QWL YW++YS +TL EL S+++W+P W +
Sbjct: 14 LAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELILQSLLEWIPIWYTA 73
Query: 77 KLIFICWLVLPYFNGAAFVYQNYVRPMFVKHQMVN 111
KL+F+ WLVLP F GAAF+Y VR F K+ ++
Sbjct: 74 KLVFVAWLVLPQFRGAAFIYNKVVREQFKKYGILK 108
>AT4G36720.1 | chr4:17307769-17309668 FORWARD LENGTH=201
Length = 200
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 22 VALAYPLYASVKAIETKSPVDDQQWLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFI 81
+ + P+Y++ KAIE+ + Q+ L YW Y +L E+ II W P + +K F+
Sbjct: 44 IGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVKFAFL 103
Query: 82 CWLVLPYFNGAAFVYQNYVRPMFVKHQ 108
WL LP G+ +Y N +RP ++HQ
Sbjct: 104 VWLQLPTVEGSKQIYNNQIRPFLLRHQ 130
>AT5G42560.1 | chr5:17015573-17016969 FORWARD LENGTH=297
Length = 296
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 21 LVALAYPLYASVKAIETKSPVDDQQ--WLTYWVMYSLITLFELTFASIIQWLPFWPSMKL 78
++ AYP Y K +E P +Q W YW++ + +T+FE + + W+P + KL
Sbjct: 13 VLGYAYPAYECYKTVEKNRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYSEAKL 72
Query: 79 IFICWLVLPYFNGAAFVYQNYVRPMFVKHQ 108
F +L P G +VY+++ RP +H+
Sbjct: 73 AFFIYLWYPKTRGTTYVYESFFRPYLSQHE 102
>AT1G75700.1 | chr1:28423956-28424931 FORWARD LENGTH=178
Length = 177
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 25 AYPLYASVKAIETKSPVDDQQ--WLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFIC 82
AYP Y K +E P Q W YW++ + +T+FE +++ WLP + KL F
Sbjct: 17 AYPAYECFKTVELNKPEIQQLQFWCQYWIIVAALTIFERIGDALVSWLPMYSEAKLAFFI 76
Query: 83 WLVLPYFNGAAFVYQNYVRPMFVKHQ 108
+L P G +VY ++ RP KH+
Sbjct: 77 YLWFPKTKGTTYVYDSFFRPYIAKHE 102
>AT1G19950.1 | chr1:6925043-6926527 FORWARD LENGTH=316
Length = 315
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 25 AYPLYASVKAIETKSPVDDQQ--WLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFIC 82
AYP Y KA+E P Q W YW++ + +T+FE ++ W+P + KL F
Sbjct: 17 AYPAYECYKAVEKNKPEMQQLRFWCQYWILVAALTIFERVGDALASWVPLYCEAKLAFFI 76
Query: 83 WLVLPYFNGAAFVYQNYVRPMFVKHQ 108
+L P G +VY ++ +P KH+
Sbjct: 77 YLWFPKTRGTTYVYDSFFQPYVAKHE 102
>AT2G36020.1 | chr2:15123424-15125140 REVERSE LENGTH=259
Length = 258
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 21 LVALAYPLYASVKAIETKSPVDDQQ---WLTYWVMYSLITLFELTFASIIQWLPFWPSMK 77
++ YP + K +E K+ VD ++ W YW++ +LI+ FE I WLP + MK
Sbjct: 13 ILGYTYPAFECFKTVE-KNKVDIEELRFWCQYWILLALISSFERVGDFFISWLPLYGEMK 71
Query: 78 LIFICWLVLPYFNGAAFVYQNYVRPMFVKHQ 108
++F +L P G VY+ ++P +H+
Sbjct: 72 VVFFVYLWYPKTKGTRHVYETLLKPYMAQHE 102
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 5,485,875
Number of extensions: 198781
Number of successful extensions: 495
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 491
Number of HSP's successfully gapped: 11
Length of query: 314
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 216
Effective length of database: 8,419,801
Effective search space: 1818677016
Effective search space used: 1818677016
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)