BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0598500 Os11g0598500|Os11g0598500
(1290 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907 70 6e-12
AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853 70 8e-12
AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848 67 6e-11
AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927 64 6e-10
AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902 57 5e-08
AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928 55 2e-07
>AT1G59780.1 | chr1:21993581-21997691 REVERSE LENGTH=907
Length = 906
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 146/327 (44%), Gaps = 40/327 (12%)
Query: 805 NMLMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIGRWVTEGLTFKEDWP-SSVRQ-AN 862
++L S+ LP K CLLYLA +P+ +I L W EG+T+ ++ +++R A+
Sbjct: 403 HVLSLSFEGLPGYLKHCLLYLASYPEDHEIEIERLSYVWAAEGITYPGNYEGATIRDVAD 462
Query: 863 QCFDALIRRWLVYPADIGATGKIKSCEVGDLVHGFITTIARKQHIVET------------ 910
+ L++R +V T + + C++ DL+ A++++ ++
Sbjct: 463 LYIEELVKRNMVISERDALTSRFEKCQLHDLMREICLLKAKEENFLQIVTDPTSSSSVHS 522
Query: 911 -------RLSHHLARHFSIFNDL---RLRSSDRI---QTFFXXXXXXXXXXXXXXXDLEG 957
RL + FS ND+ +LRS I + F DL+G
Sbjct: 523 LASSRSRRLVVYNTSIFSGENDMKNSKLRSLLFIPVGYSRFSMGSNFIELPLLRVLDLDG 582
Query: 958 CQCFGVKNQRYLKDICNKMLLLKYLSLKGTNITQLPREINCLRELEVLDIRETMVPANAT 1017
+ G K L K++ LKYLSL ++T LP + L+ L L++R + +
Sbjct: 583 AKFKGGK----LPSSIGKLIHLKYLSLYQASVTYLPSSLRNLKSLLYLNLR---INSGQL 635
Query: 1018 VNVXXXXXXXXXAGHID-PSLRNFRTSVHIPHRIDKMVNIEVLSNVKAQRSDDLEDIGKL 1076
+NV ++ P R+ T + + + ++ +E L N + S + D+ ++
Sbjct: 636 INVPNVFKEMLELRYLSLPWERSSLTKLELGN----LLKLETLINFSTKDS-SVTDLHRM 690
Query: 1077 WQLRKLGVVINAKKSHLEKLLKAISDL 1103
+LR L ++I+ + H+E L A+S L
Sbjct: 691 TKLRTLQILISGEGLHMETLSSALSML 717
>AT3G50950.2 | chr3:18936127-18938685 FORWARD LENGTH=853
Length = 852
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 137/326 (42%), Gaps = 48/326 (14%)
Query: 807 LMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIGRWVTEGLTFKEDWPSSVRQANQCFD 866
L SY++LP KSC+L L+++P+ I + L+ W+ EG + S+ CF
Sbjct: 404 LQLSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGEDCFS 463
Query: 867 ALIRRWLVYPADIGATGKIKSCEVGDLVHGFITTIARKQHIVETRLSHHLARHFSI---F 923
L R L+ D +G I +C++ D+V + IA+K + RH I F
Sbjct: 464 GLTNRCLIEVVDKTYSGTIITCKIHDMVRDLVIDIAKKDSFSNPEGLN--CRHLGISGNF 521
Query: 924 NDLRLRSSDRIQTFFXXXXXXXXXX-----XXXXXDLEGCQCFGVKNQRY---LKDICNK 975
++ +++ + +++ D + + + + L +I ++
Sbjct: 522 DEKQIKVNHKLRGVVSTTKTGEVNKLNSDLAKKFTDCKYLRVLDISKSIFDAPLSEILDE 581
Query: 976 MLLLKY---LSLKGTN-ITQLPREINCLRELEVLDIRETMVPANATVNVXXXXXXXXXAG 1031
+ L++ LSL T+ + Q PR + L L++LD A+ N+
Sbjct: 582 IASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILD-------ASYCQNLK---------- 624
Query: 1032 HIDPSLRNFRTSVHI-----------PHRIDKMVNIEVLSNVKAQRSDD---LEDIGKLW 1077
+ P + F+ + + P I +V +EVL K RS++ L ++ L
Sbjct: 625 QLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFKPARSNNGCKLSEVKNLT 684
Query: 1078 QLRKLGVVINAKKSHLEKLLKAISDL 1103
LRKLG+ + E+ L ++ +L
Sbjct: 685 NLRKLGLSLTRGDQIEEEELDSLINL 710
>AT3G46730.1 | chr3:17213069-17215612 REVERSE LENGTH=848
Length = 847
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 25/272 (9%)
Query: 755 DILKECEGHEFCMRIFTHAVYANPKKSTEELSKLHSTLQDSQKSFDAIAKNMLMYSYNDL 814
+++K+C G + + + + +K T E ++ ++L K + S+ ++
Sbjct: 357 EMVKKCGGLPLAIVVLSGLL---SRKRTNEWHEVCASLWRRLKDNSIHISTVFDLSFKEM 413
Query: 815 PKEYKSCLLYLAIFPKGQKIRRSTLIGRWVTEGLTFKEDWPSSVRQANQCF-DALIRRWL 873
E K C LY ++FP+ +I+ LI V EG +ED + +C+ D L+ R L
Sbjct: 414 RHELKLCFLYFSVFPEDYEIKVEKLIHLLVAEGF-IQEDEEMMMEDVARCYIDELVDRSL 472
Query: 874 VYPADIGATGKIKSCEVGDLVH----------GFITTIARKQH---IVETRLSHHLARHF 920
V I GK+ SC + DL+ F+ KQH I + HHL +
Sbjct: 473 VKAERI-ERGKVMSCRIHDLLRDLAIKKAKELNFVNVYNEKQHSSDICRREVVHHLMNDY 531
Query: 921 SIFN---DLRLRSSDRI---QTFFXXXXXXXXXXXXXXXDLEGCQCFGVKNQRYLKDICN 974
+ + + R+RS I + F ++EG L D+
Sbjct: 532 YLCDRRVNKRMRSFLFIGERRGFGYVNTTNLKLKLLRVLNMEGLLFVSKNISNTLPDVIG 591
Query: 975 KMLLLKYLSLKGTNITQLPREINCLRELEVLD 1006
+++ L+YL + T ++ LP I+ LR L+ LD
Sbjct: 592 ELIHLRYLGIADTYVSILPASISNLRFLQTLD 623
>AT3G07040.1 | chr3:2226244-2229024 REVERSE LENGTH=927
Length = 926
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 129/658 (19%), Positives = 273/658 (41%), Gaps = 55/658 (8%)
Query: 656 IVDKIKHHLQGECPLIILKVDDMMDGSRWEEFRRALSLLECSADALIFTTE----STEQA 711
+V+K+ +LQ + +++L DD+ W E AL + ++ T + S
Sbjct: 268 LVEKLVEYLQSKRYIVVL--DDVWTTGLWREISIALPDGIYGSRVMMTTRDMNVASFPYG 325
Query: 712 KGYCYPPREPIDHCSHVGLYHHTVLELTSKQKNKSNYDPRIFLDILKECEGHEFCMRIFT 771
G E + L+ + + +Q N +P I +++ C+G + I +
Sbjct: 326 IGSTKHEIELLKEDEAWVLFSNKAFPASLEQCRTQNLEP-IARKLVERCQG--LPLAIAS 382
Query: 772 HAVYANPKKSTEELSKLHSTL--QDSQKSFDAIAKNMLMYSYNDLPKEYKSCLLYLAIFP 829
+ KK E K++STL + + I ++++ S+NDLP K C LY ++FP
Sbjct: 383 LGSMMSTKKFESEWKKVYSTLNWELNNNHELKIVRSIMFLSFNDLPYPLKRCFLYCSLFP 442
Query: 830 KGQKIRRSTLIGRWVTEGLTFKEDWPSSVRQANQCFDALIRRWLVYPADIGATGKIKSCE 889
+++R LI W+ + + A+ + L+ R ++ G+ K+ +
Sbjct: 443 VNYRMKRKRLIRMWMAQRFVEPIRGVKAEEVADSYLNELVYRNMLQVILWNPFGRPKAFK 502
Query: 890 VGDLVHGFITTIARKQHIVET------------RLSHHLARHFSIFNDL---RLRSSDRI 934
+ D++ ++++ + + + ++ +RH I ++ +R+++ +
Sbjct: 503 MHDVIWEIALSVSKLERFCDVYNDDSDGDDAAETMENYGSRHLCIQKEMTPDSIRATN-L 561
Query: 935 QTFFXXXXXXXXXXXXXXXDLEGCQCFGVKNQRYLKDICNKMLLLKYLSLKGTNITQLPR 994
+ +L + L D M LKYL+L T + +LP+
Sbjct: 562 HSLLVCSSAKHKMELLPSLNLLRALDLEDSSISKLPDCLVTMFNLKYLNLSKTQVKELPK 621
Query: 995 EINCLRELEVLD-----IRETMVPANATVNVXXXXXXXXXAGHIDPSLRNFRTSVHIPHR 1049
+ L LE L+ I E + + GH S N+ + +
Sbjct: 622 NFHKLVNLETLNTKHSKIEELPLGMWKLKKLRYLITFRRNEGH--DSNWNYVLGTRVVPK 679
Query: 1050 IDKMVNIEVLSNVKAQRSDDLEDIGKLWQLRKLGVVINAKKSHLEKLLKAISDLHECIRS 1109
I ++ +++V+ A+ + ++++G + QL ++ +V+ ++ H L +++ + IR
Sbjct: 680 IWQLKDLQVMDCFNAE-DELIKNLGCMTQLTRISLVM-VRREHGRDLCDSLNKIKR-IRF 736
Query: 1110 XXXXXXXXXXXXXXSNPELPDHIDSNLPHPKKLESLSISGARYLFPLLIKSDNNKLAKVT 1169
+ E P ID +L +E L ++G P + N L +
Sbjct: 737 LSLTSI---------DEEEPLEID-DLIATASIEKLFLAGKLERVPSWFNTLQN-LTYLG 785
Query: 1170 LSSTQLNQDDLEVLAKLPKLQCVRLRHISCTESMLIFKKDDFKCLKYL-LIEGFNLTNIT 1228
L +QL ++ + + LP+L V L + + F+ LK L +++ +LT +
Sbjct: 786 LRGSQLQENAILSIQTLPRL--VWLSFYNAYMGPRLRFAQGFQNLKILEIVQMKHLTEVV 843
Query: 1229 FENRSACELEKM-VLSSTSIESI-SGVDRLPKFKELELNNSPVPNEVKEAIENNKRIN 1284
E+ + EL+K+ V + +E + G++ L +EL L + V N++ E I ++
Sbjct: 844 IEDGAMFELQKLYVRACRGLEYVPRGIENLINLQELHLIH--VSNQLVERIRGEGSVD 899
>AT5G35450.1 | chr5:13667809-13670685 FORWARD LENGTH=902
Length = 901
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 126/320 (39%), Gaps = 62/320 (19%)
Query: 806 MLMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIGRWVTEGLTFKEDWPSSVRQANQCF 865
+L SY DLP + K C LYLA FP+ KI+ TL W EG+ D + +
Sbjct: 405 ILSLSYEDLPTDLKHCFLYLAHFPEDYKIKTRTLYSYWAAEGIY---DGLTILDSGEDYL 461
Query: 866 DALIRRWLVYPADIGATGKIKSCEVGDLVHGFITTIARKQHIVET--------------- 910
+ L+RR LV + ++K C++ D++ + A+ ++ ++
Sbjct: 462 EELVRRNLVIAEKSNLSWRLKLCQMHDMMREVCISKAKVENFLQIIKVPTSTSTIIAQSP 521
Query: 911 ----RLSHHLARHFSIFN---------------DLRLRSSDRIQTFFXXXXXXXXXXXXX 951
RL+ H + F I DL ++S+ R Q+
Sbjct: 522 SRSRRLTVHSGKAFHILGHKKKVRSLLVLGLKEDLWIQSASRFQSL----------PLLR 571
Query: 952 XXDLEGCQCFGVKNQRYLKDICNKMLLLKYLSLKGTNITQLPREINCLRELEVLDIRETM 1011
DL + G K L ++ L++LSL ++ LP I L+ + L++
Sbjct: 572 VLDLSSVKFEGGK----LPSSIGGLIHLRFLSLHQAVVSHLPSTIRNLKLMLYLNLH--- 624
Query: 1012 VPANATVNVXXXXXXXXXAGHIDPSLRNFRTSVHIPHRID--KMVNIEVLSNVKAQRSDD 1069
V V+V ++ L +H +++ +VN+E L Q S
Sbjct: 625 VAIGVPVHVPNVLKEMLELRYLSLPL-----DMHDKTKLELGDLVNLEYLWCFSTQHS-S 678
Query: 1070 LEDIGKLWQLRKLGVVINAK 1089
+ D+ ++ +LR GV + +
Sbjct: 679 VTDLLRMTKLRFFGVSFSER 698
>AT1G53350.1 | chr1:19903899-19907515 FORWARD LENGTH=928
Length = 927
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 806 MLMYSYNDLPKEYKSCLLYLAIFPKGQKIRRSTLIGRWVTEGLTFKEDWPSSVRQANQCF 865
+L SY DLP + K C YLA FP+ KI L WV EG+ S+++ + +
Sbjct: 406 VLSLSYEDLPMQLKHCFFYLAHFPEDYKIDVKILFNYWVAEGIITPFHDGSTIQDTGESY 465
Query: 866 -DALIRRWLVYPADIGATGKIKSCEVGDLVHGFITTIARKQHIV 908
+ L+RR +V + T +I+ C++ D++ + A++++ +
Sbjct: 466 LEELVRRNMVVVEESYLTSRIEYCQMHDMMREVCLSKAKEENFI 509
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 23,043,752
Number of extensions: 903907
Number of successful extensions: 2807
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 2820
Number of HSP's successfully gapped: 8
Length of query: 1290
Length of database: 11,106,569
Length adjustment: 110
Effective length of query: 1180
Effective length of database: 8,090,809
Effective search space: 9547154620
Effective search space used: 9547154620
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 118 (50.1 bits)