BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0594000 Os11g0594000|J100054J17
(173 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G23270.1 | chr5:7839132-7840874 FORWARD LENGTH=515 126 7e-30
AT3G19930.1 | chr3:6935048-6936841 FORWARD LENGTH=515 121 1e-28
AT3G19940.1 | chr3:6938211-6939975 FORWARD LENGTH=515 121 2e-28
AT1G34580.1 | chr1:12660631-12663553 FORWARD LENGTH=507 121 2e-28
AT1G50310.1 | chr1:18635984-18638110 FORWARD LENGTH=518 120 4e-28
AT5G61520.1 | chr5:24739358-24741175 REVERSE LENGTH=515 118 2e-27
AT1G77210.1 | chr1:29009036-29010980 REVERSE LENGTH=505 113 5e-26
AT1G11260.1 | chr1:3777460-3780133 FORWARD LENGTH=523 112 9e-26
AT4G02050.1 | chr4:898387-900095 REVERSE LENGTH=514 112 1e-25
AT5G26340.1 | chr5:9243851-9246994 REVERSE LENGTH=527 110 3e-25
AT4G21480.1 | chr4:11433320-11435284 REVERSE LENGTH=503 109 8e-25
AT1G07340.1 | chr1:2254873-2256712 FORWARD LENGTH=499 107 4e-24
AT5G26250.1 | chr5:9196758-9198681 FORWARD LENGTH=508 100 6e-22
AT3G05960.1 | chr3:1783587-1785334 REVERSE LENGTH=508 98 2e-21
>AT5G23270.1 | chr5:7839132-7840874 FORWARD LENGTH=515
Length = 514
Score = 126 bits (316), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 96/166 (57%), Gaps = 9/166 (5%)
Query: 1 MAAG-FVDDEXXXXXXXXXVTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFP 59
MA G F+D+ VTAFV ++C AAMGG ++GYDI I+GGV SME FL FFP
Sbjct: 1 MAGGAFIDESGHGGDYEGRVTAFVMITCIVAAMGGLLFGYDIGISGGVISMEDFLTKFFP 60
Query: 60 GVLRRMXXXXXXXXXXXPRVSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRR 119
VLR+M R + YCK+D++LLTLFTSSLY++ L A LAS +T GR+
Sbjct: 61 DVLRQMQNKRG-------RETEYCKYDNELLTLFTSSLYLAALF-ASFLASTITRLFGRK 112
Query: 120 ASMILGGFAYIXXXXXXXXXXXXXXXILGRALLGVGLGFTTQVTAL 165
SM++G A++ I+GR LGVG+GF Q L
Sbjct: 113 VSMVIGSLAFLSGALLNGLAINLEMLIIGRLFLGVGVGFANQSVPL 158
>AT3G19930.1 | chr3:6935048-6936841 FORWARD LENGTH=515
Length = 514
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 91/161 (56%), Gaps = 10/161 (6%)
Query: 1 MAAGFVDDEXXXXXXXXXVTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPG 60
MA GFV +T V ++C A GG I+GYD+ I+GGV+SMEPFL +FFP
Sbjct: 1 MAGGFVSQTPGVRNYNYKLTPKVFVTCFIGAFGGLIFGYDLGISGGVTSMEPFLEEFFPY 60
Query: 61 VLRRMXXXXXXXXXXXPRVSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRA 120
V ++M + YC+FDSQLLTLFTSSLY++ L+++ L AS +T GR+
Sbjct: 61 VYKKMKSA---------HENEYCRFDSQLLTLFTSSLYVAALVSS-LFASTITRVFGRKW 110
Query: 121 SMILGGFAYIXXXXXXXXXXXXXXXILGRALLGVGLGFTTQ 161
SM LGGF + ++GR LLG G+GF Q
Sbjct: 111 SMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQ 151
>AT3G19940.1 | chr3:6938211-6939975 FORWARD LENGTH=515
Length = 514
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
VTAFV ++C AAMGG ++GYD+ I+GGV+SME FL FFP V +M
Sbjct: 21 VTAFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLTKFFPQVESQMKKAK--------H 72
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
+ YCKFD+Q+L LFTSSLY++ L+ A +AS +T GR+ SM +GG A++
Sbjct: 73 DTAYCKFDNQMLQLFTSSLYLAALV-ASFMASVITRKHGRKVSMFIGGLAFLIGALFNAF 131
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
I+GR LLGVG+GF Q T +
Sbjct: 132 AVNVSMLIIGRLLLGVGVGFANQSTPV 158
>AT1G34580.1 | chr1:12660631-12663553 FORWARD LENGTH=507
Length = 506
Score = 121 bits (303), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 90/143 (62%), Gaps = 10/143 (6%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
+TA V +SC AA G I+GYDI I+GGV++M+PFL FFP VL++ +
Sbjct: 20 ITAAVVMSCIVAASCGLIFGYDIGISGGVTTMKPFLEKFFPSVLKK---------ASEAK 70
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
+ YC +DSQLLT FTSSLY++GL+ A L+AS +TA+ GRR +MILGGF ++
Sbjct: 71 TNVYCVYDSQLLTAFTSSLYVAGLV-ASLVASRLTAAYGRRTTMILGGFTFLFGALINGL 129
Query: 139 XXXXXXXILGRALLGVGLGFTTQ 161
I GR LLG G+GFT Q
Sbjct: 130 AANIAMLISGRILLGFGVGFTNQ 152
>AT1G50310.1 | chr1:18635984-18638110 FORWARD LENGTH=518
Length = 517
Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 90/147 (61%), Gaps = 9/147 (6%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
VT FV ++C AAMGG ++GYD+ I+GGV+SME FL FFP V ++M R
Sbjct: 21 VTVFVIMTCIVAAMGGLLFGYDLGISGGVTSMEEFLSKFFPEVDKQMHEAR--------R 72
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
+ YCKFD+QLL LFTSSLY++ L ++ +AS VT GR+ SM +GG A++
Sbjct: 73 ETAYCKFDNQLLQLFTSSLYLAALASS-FVASAVTRKYGRKISMFVGGVAFLIGSLFNAF 131
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
I+GR LLGVG+GF Q T +
Sbjct: 132 ATNVAMLIVGRLLLGVGVGFANQSTPV 158
>AT5G61520.1 | chr5:24739358-24741175 REVERSE LENGTH=515
Length = 514
Score = 118 bits (295), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 87/147 (59%), Gaps = 4/147 (2%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
+T FV SC AAMGG I+GYDI ++GGV SM PFL+ FFP V +
Sbjct: 20 ITYFVVASCVMAAMGGVIFGYDIGVSGGVMSMGPFLKRFFPKVYKLQEEDRRRRGNSN-- 77
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
++YC F+SQLLT FTSSLY+SGL+ A LLAS VT S GR+ S+ LGG +++
Sbjct: 78 -NHYCLFNSQLLTSFTSSLYVSGLI-ATLLASSVTRSWGRKPSIFLGGVSFLAGAALGGS 135
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
I+ R LLGVG+GF Q L
Sbjct: 136 AQNVAMLIIARLLLGVGVGFANQSVPL 162
>AT1G77210.1 | chr1:29009036-29010980 REVERSE LENGTH=505
Length = 504
Score = 113 bits (282), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 12/168 (7%)
Query: 1 MAAGFVDDE---XXXXXXXXXVTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDF 57
MA G + DE +T++ +C +MGG+++GYD+ ++GGV+SM+ FL++F
Sbjct: 1 MAGGALTDEGGLKRAHLYEHRITSYFIFACIVGSMGGSLFGYDLGVSGGVTSMDDFLKEF 60
Query: 58 FPGVLRRMXXXXXXXXXXXPRVSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRG 117
FPG+ +R ++YCK+D+Q+LTLFTSSLY +GL++ AS+VT G
Sbjct: 61 FPGIYKRKQMHLNE--------TDYCKYDNQILTLFTSSLYFAGLIST-FGASYVTRIYG 111
Query: 118 RRASMILGGFAYIXXXXXXXXXXXXXXXILGRALLGVGLGFTTQVTAL 165
RR S+++G ++ ILGR LG+G+GF Q L
Sbjct: 112 RRGSILVGSVSFFLGGVINAAAKNILMLILGRIFLGIGIGFGNQAVPL 159
>AT1G11260.1 | chr1:3777460-3780133 FORWARD LENGTH=523
Length = 522
Score = 112 bits (280), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 84/147 (57%), Gaps = 9/147 (6%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
+T FV +C AAMGG I+GYDI I+GGV+SM FL+ FFP V R+
Sbjct: 19 LTPFVLFTCVVAAMGGLIFGYDIGISGGVTSMPSFLKRFFPSVYRKQQEDAS-------- 70
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
+ YC++DS LT+FTSSLY++ L+++ L+AS VT GRR SM+ GG +
Sbjct: 71 TNQYCQYDSPTLTMFTSSLYLAALISS-LVASTVTRKFGRRLSMLFGGILFCAGALINGF 129
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
I+GR LLG G+GF Q L
Sbjct: 130 AKHVWMLIVGRILLGFGIGFANQAVPL 156
>AT4G02050.1 | chr4:898387-900095 REVERSE LENGTH=514
Length = 513
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 10/147 (6%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
VT++V ++C AA+GG+I+GYDI I+GGV+SM+ FL +FF V +
Sbjct: 23 VTSYVIIACLVAAIGGSIFGYDIGISGGVTSMDEFLEEFFHTVYEKKKQA---------H 73
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
SNYCK+D+Q L FTSSLY++GL++ L+AS +T + GRRAS++ GG +++
Sbjct: 74 ESNYCKYDNQGLAAFTSSLYLAGLVST-LVASPITRNYGRRASIVCGGISFLIGSGLNAG 132
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
+ GR +LGVG+GF Q L
Sbjct: 133 AVNLAMLLAGRIMLGVGIGFGNQAVPL 159
>AT5G26340.1 | chr5:9243851-9246994 REVERSE LENGTH=527
Length = 526
Score = 110 bits (276), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 84/147 (57%), Gaps = 8/147 (5%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
+T V +SC AA GG ++GYD+ ++GGV+SM FL FFP V R++ +
Sbjct: 19 ITPIVIISCIMAATGGLMFGYDVGVSGGVTSMPDFLEKFFPVVYRKV-------VAGADK 71
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
SNYCK+D+Q L LFTSSLY++G LTA AS+ T + GRR +M++ G +I
Sbjct: 72 DSNYCKYDNQGLQLFTSSLYLAG-LTATFFASYTTRTLGRRLTMLIAGVFFIIGVALNAG 130
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
I GR LLG G+GF Q L
Sbjct: 131 AQDLAMLIAGRILLGCGVGFANQAVPL 157
>AT4G21480.1 | chr4:11433320-11435284 REVERSE LENGTH=503
Length = 502
Score = 109 bits (272), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 9/147 (6%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
+T +V ++C AAMGG I+GYDI I+GGV++M+ F + FFP V +
Sbjct: 19 LTLYVTVTCIVAAMGGLIFGYDIGISGGVTTMDSFQQKFFPSVYEKQKKDHDS------- 71
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
+ YC+FDS LTLFTSSLY++ L ++ L+AS+VT GR+ SM+LGG +
Sbjct: 72 -NQYCRFDSVSLTLFTSSLYLAALCSS-LVASYVTRQFGRKISMLLGGVLFCAGALLNGF 129
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
I+GR LLG G+GFT Q L
Sbjct: 130 ATAVWMLIVGRLLLGFGIGFTNQSVPL 156
>AT1G07340.1 | chr1:2254873-2256712 FORWARD LENGTH=499
Length = 498
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 89/165 (53%), Gaps = 10/165 (6%)
Query: 1 MAAGFVDDEXXXXXXXXXVTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPG 60
MA G ++ E +T V L C AA+GG ++GYDI I+GGV+SM+ FL DFFP
Sbjct: 1 MAVGSMNVEEGTKAFPAKLTGQVFLCCVIAAVGGLMFGYDIGISGGVTSMDTFLLDFFPH 60
Query: 61 VLRRMXXXXXXXXXXXPRVSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRA 120
V + +NYCKFD QLL LFTSSLY++G+ A ++S+V+ + GR+
Sbjct: 61 VYEKKHRV---------HENNYCKFDDQLLQLFTSSLYLAGIF-ASFISSYVSRAFGRKP 110
Query: 121 SMILGGFAYIXXXXXXXXXXXXXXXILGRALLGVGLGFTTQVTAL 165
+++L ++ I GR LLG G+GF Q L
Sbjct: 111 TIMLASIFFLVGAILNLSAQELGMLIGGRILLGFGIGFGNQTVPL 155
>AT5G26250.1 | chr5:9196758-9198681 FORWARD LENGTH=508
Length = 507
Score = 99.8 bits (247), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 80/147 (54%), Gaps = 10/147 (6%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
+T +V + AA+GG I+GYDI I+GGV++M+ FL++FFP V R
Sbjct: 18 MTVYVFICVIIAAVGGLIFGYDIGISGGVTAMDDFLKEFFPSVYERKKHA---------H 68
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
+NYCK+D+Q L LFTSSLY++ L+ A AS + GRR +M L ++
Sbjct: 69 ENNYCKYDNQFLQLFTSSLYLAALV-ASFFASATCSKLGRRPTMQLASIFFLIGVGLAAG 127
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
I+GR LLG G+GF Q L
Sbjct: 128 AVNIYMLIIGRILLGFGVGFGNQAVPL 154
>AT3G05960.1 | chr3:1783587-1785334 REVERSE LENGTH=508
Length = 507
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 19 VTAFVALSCATAAMGGAIYGYDISIAGGVSSMEPFLRDFFPGVLRRMXXXXXXXXXXXPR 78
+T +V + AA+GG I+GYDI I+GGVS+M+ FL++FFP V R
Sbjct: 17 MTVYVFICVMIAAVGGLIFGYDIGISGGVSAMDDFLKEFFPAVWERKKHV---------H 67
Query: 79 VSNYCKFDSQLLTLFTSSLYISGLLTAVLLASWVTASRGRRASMILGGFAYIXXXXXXXX 138
+NYCK+D+Q L LFTSSLY++ L+ A +AS + GRR +M ++
Sbjct: 68 ENNYCKYDNQFLQLFTSSLYLAALV-ASFVASATCSKLGRRPTMQFASIFFLIGVGLTAG 126
Query: 139 XXXXXXXILGRALLGVGLGFTTQVTAL 165
I+GR LG G+GF Q L
Sbjct: 127 AVNLVMLIIGRLFLGFGVGFGNQAVPL 153
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.326 0.139 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,519,916
Number of extensions: 67905
Number of successful extensions: 220
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 186
Number of HSP's successfully gapped: 14
Length of query: 173
Length of database: 11,106,569
Length adjustment: 92
Effective length of query: 81
Effective length of database: 8,584,297
Effective search space: 695328057
Effective search space used: 695328057
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 108 (46.2 bits)