BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0573700 Os11g0573700|Os11g0573700
(700 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747 131 1e-30
AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576 77 3e-14
AT4G04650.1 | chr4:2353989-2355213 REVERSE LENGTH=333 63 5e-10
AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344 62 1e-09
AT3G09510.1 | chr3:2921804-2923258 FORWARD LENGTH=485 59 8e-09
AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366 57 5e-08
AT5G18880.1 | chr5:6300535-6301422 REVERSE LENGTH=296 56 6e-08
AT1G43730.1 | chr1:16508723-16509784 REVERSE LENGTH=321 56 8e-08
AT4G20520.1 | chr4:11045912-11047716 FORWARD LENGTH=377 53 4e-07
ATMG01250.1 | chrM:310514-310882 FORWARD LENGTH=123 51 2e-06
AT1G60720.1 | chr1:22357072-22357941 FORWARD LENGTH=290 49 7e-06
>AT3G24255.1 | chr3:8789471-8793208 FORWARD LENGTH=747
Length = 746
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 172/418 (41%), Gaps = 80/418 (19%)
Query: 264 LPCKVEEFPIIYLGLPLSMRKPTKAELQPVLDKLAGKVAGWKPKLLSPDGRLCLIKSVLM 323
P P+ YLGLPL +K T ++ P+++K+ ++ W + LS GRL LI SV+
Sbjct: 16 FPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIH 75
Query: 324 ALPVHFLSALQMPKWAVKEIERKCRGFLWKGQEDVSGGHCLVAWKNVCAPVQNGGLGIRN 383
+L ++SA ++P +KEI+ C FLW G E ++ VAW +VC P GGLGIR+
Sbjct: 76 SLTNFWMSAFRLPSACIKEIDSICSSFLWSGPE-LNTKKAKVAWSDVCTPKDEGGLGIRS 134
Query: 384 LDAF---------GQALRLKWLAKSLEQKNRPWAKSGYKLGEDVEKIFNSAAEFCVGNGK 434
L G W+ K + K+R A SG+ + + NG
Sbjct: 135 LKEANKGSFWSISGNTTLGSWMWKKI-LKHRALA-SGF-------------VKHDIHNGS 179
Query: 435 DTKFWTANWLNGGSIAWRWPVLSTYVGRSQL------TVAQALTNNRWVRDLQGALSNEA 488
+T FW NW G R ++ + G + +VA+A+ N+R R ++
Sbjct: 180 NTSFWFDNWSKIG----RLIDVTGHRGCIDMGITLHASVAEAVVNHRPRRH-----RHDT 230
Query: 489 MAQFFQLWDEVHTVELNLEEDTIRWKLSSDGL---FTVSSAYSLFFMAREICPFSELIWH 545
+ + + EV L EDT+RWK + D F ++ + + + +W
Sbjct: 231 LLRIEDVIAEVRHQGLTSGEDTVRWKGNGDIFKPCFNTKETWAATREPKLKVNWYKGVWF 290
Query: 546 IKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCSLCQSEAEDCLHLFVTCAFTRRVW 605
A + W+A K R T D + + C LC E HLF TC ++
Sbjct: 291 SHATPKYSVLAWIAIKNRLTTGDRMLSWNAGADSSCVLCHHLVETRDHLFFTCPYS---- 346
Query: 606 RMMQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFALTCWLLWKERNAR 663
A + F T Y F LT LWKERN R
Sbjct: 347 ---------------------------AEVPFLTRY------TFQLTLHSLWKERNGR 371
>AT4G29090.1 | chr4:14333528-14335255 FORWARD LENGTH=576
Length = 575
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 162/421 (38%), Gaps = 57/421 (13%)
Query: 323 MALPVHFLSALQMPKWAVKEIERKCRGFLWKGQEDVSGGHCLVAWKNVCAPVQNGGLGIR 382
MALP + ++ +PK K+I F W+ +++ G H AW ++ GG+G +
Sbjct: 1 MALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMH-WKAWDHLSCYKAEGGIGFK 59
Query: 383 NLDAFGQALRLKWLAKSLEQ---------KNRPWAKSG-------------YKLGEDVEK 420
+++AF AL K + + L + K+R + KS +K ++
Sbjct: 60 DIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQE 119
Query: 421 IFNSAAEFCVGNGKDTKFWTANWLNGGSIA-----WRWPVLSTYVGRSQLTVAQAL--TN 473
I A VGNG+D W WL+ + R P S L V+ + +
Sbjct: 120 ILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESG 179
Query: 474 NRWVRDLQGALSNEAMAQFFQLWDEVHTVELNLEEDTIRWKLSSDGLFTVSSAYSLFFM- 532
W +D+ L E + E+ + D+ W +S G +TV S Y +
Sbjct: 180 REWRKDVIEMLFPEVERKLI---GELRPGGRRI-LDSYTWDYTSSGDYTVKSGYWVLTQI 235
Query: 533 ------AREIC-----PFSELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCC 581
+E+ P + IW + +++ FLW A L R E C
Sbjct: 236 INKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESAC 295
Query: 582 SLCQSEAEDCLHLFVTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTGY 641
C S E HL C F R W + + +P E A + ++ F G
Sbjct: 296 IRCPSCKETVNHLLFKCTFARLTWAIS------SIPIPLGGEWADSI-YVNLYWVFNLGN 348
Query: 642 -RSIFDSVFALTCWL---LWKERNARVFEQKFRSMEQLVQDIKEEAIVWKTAGVFTTCNS 697
++ L WL LWK RN VF + + +++++ +++ W+ +C +
Sbjct: 349 GNPQWEKASQLVPWLLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGT 408
Query: 698 E 698
+
Sbjct: 409 K 409
>AT4G04650.1 | chr4:2353989-2355213 REVERSE LENGTH=333
Length = 332
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 93/256 (36%), Gaps = 11/256 (4%)
Query: 430 VGNGKDTKFWTANWLNGGS-IAWRWPVLSTYVGRS-QLTVAQALTNNRWVRDLQGALSNE 487
VG+G KFW NW+ G I P+ VG V AL W + N
Sbjct: 16 VGSGVTAKFWHDNWIGLGPLIEVIGPLGPRTVGLPIDAVVRDALRGTSWWIASSRS-RNP 74
Query: 488 AMAQFFQLWDEVHTVELNLEEDTIRWKL---SSDGLFTVSSAYSLFFMAREICPFSELIW 544
+ Q L E + +D+ WK + F+ +S P+ + +W
Sbjct: 75 IIVQLKNLLPEAQGLLDCQHDDSFLWKTDLHAPSNRFSAPRTWSALHPQSHTVPWHKAVW 134
Query: 545 HIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCSLCQSEAEDCLHLFVTCAFTRRV 604
+ F W+ A R T D L G C LC + + HLF C F+ V
Sbjct: 135 FKNHVPKHAFICWVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVV 194
Query: 605 WRMMQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFALTCWLLWKERNARV 664
WR +N P +W + + I F + +W+ERN R+
Sbjct: 195 WRFFTASTNLN---PPAQLMDCLNWLLSP--SREKNICLIIRLAFHSCVYAIWRERNQRL 249
Query: 665 FEQKFRSMEQLVQDIK 680
RS E +++DI+
Sbjct: 250 HSGVSRSTESILKDIQ 265
>AT3G25270.1 | chr3:9203934-9204965 REVERSE LENGTH=344
Length = 343
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 543 IWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCSLCQSEAEDCLHLFVTCAFTR 602
IW +K +++ FLW G T DNL +R ++ C C E E HLF C + +
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77
Query: 603 RVWRM----MQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFALTCWL--- 655
+VWR Q + T+ E L+ + +A R +F L W+
Sbjct: 78 QVWRASGIPHQELRTTGITMETKMELLLS-----SCLANRQ------PQLFNLAIWILWR 126
Query: 656 LWKERNARVFEQKFRSMEQLVQDIKEEAIVWKTAGVF 692
LWK RN VF+QK S + +Q + + W+ +
Sbjct: 127 LWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTY 163
>AT3G09510.1 | chr3:2921804-2923258 FORWARD LENGTH=485
Length = 484
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 84/219 (38%), Gaps = 18/219 (8%)
Query: 486 NEAMAQFFQLWDE--VHTVEL--NLEEDTIRWKLSSDGLFTVSSAYSLFFMARE-----I 536
+ ++QF D +H + L + + D I W ++ G +TV S Y L I
Sbjct: 90 DSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAI 149
Query: 537 CP------FSELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCSLCQSEAED 590
P IW++ +++ FLW A T + L RG + + C C E E
Sbjct: 150 NPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENES 209
Query: 591 CLHLFVTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFA 650
H TC F WR+ + N L+ + E +++ + + + +
Sbjct: 210 INHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLP---V 266
Query: 651 LTCWLLWKERNARVFEQKFRSMEQLVQDIKEEAIVWKTA 689
W +WK RN VF + S + V K E W A
Sbjct: 267 WLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNA 305
>AT2G02650.1 | chr2:735411-736546 FORWARD LENGTH=366
Length = 365
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 6/160 (3%)
Query: 541 ELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCSLCQSEAEDCLHLFVTCAF 600
+ IW + +++ FLW G T L R + C C E E H+ C +
Sbjct: 35 QAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPY 94
Query: 601 TRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFAL-TCWLLWKE 659
T+ VWR IG + P+ E L + +T + D W LWK
Sbjct: 95 TQSVWRSANIIIGNQWGPPSSFEDNLN----RLIQLSKTQTTNSLDRFLPFWIMWRLWKS 150
Query: 660 RNARVFEQKFRSMEQLVQDIKEEAIVWKTAGVFTTCNSEI 699
RN +F+QK +S + + ++A W A TT N+ +
Sbjct: 151 RNVFLFQQKCQSPDYEARKGIQDATEWLNANE-TTENTNV 189
>AT5G18880.1 | chr5:6300535-6301422 REVERSE LENGTH=296
Length = 295
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 97/250 (38%), Gaps = 31/250 (12%)
Query: 430 VGNGKDTKFWTANWLNGGSIAWRWPVLSTYVG---------RSQLTVAQALTNNRWVRDL 480
+GNG+ FW W + G L T++G R V +A N W L
Sbjct: 16 MGNGESASFWYDAWTDFGQ-------LLTFLGAAGPRQLRIRQDARVVEASRNGDWF--L 66
Query: 481 QGALSNEAMAQFFQLWDEVHTVELNLEEDTIRWKLSSDGL---FTVSSAYSLFFMAREIC 537
A S+ + F + +D+ W+ ++ F+ + +
Sbjct: 67 PAARSDNSQL-FLAALTMAPVPHESRGQDSFLWRNAAGSYLPSFSSRDTWEQIRVHSPTV 125
Query: 538 PFSELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCS--LCQSEAEDCLHLF 595
P+++++W + R W++ R T D L RGW S LC + E HLF
Sbjct: 126 PWAKVVWFKEYIPRFSLITWMSFLERLPTRDRL--RGWGMNIPSSWVLCSNGDETHAHLF 183
Query: 596 VTCAFTRRVWRMMQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFALTCWL 655
C+F+ +W + P PA + W ++ + R+ +I + +
Sbjct: 184 FECSFSLAIWEFFASKFRPS---PPFGLPAASSWILQ--LPLRSHSTTILKLLLQSAVYH 238
Query: 656 LWKERNARVF 665
+WKERNAR+F
Sbjct: 239 VWKERNARIF 248
>AT1G43730.1 | chr1:16508723-16509784 REVERSE LENGTH=321
Length = 320
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 86/254 (33%), Gaps = 40/254 (15%)
Query: 430 VGNGKDTKFWTANWLNGGSIAWRWPVLSTYVGRSQLTVAQALTNNRWVRDLQGALSNEAM 489
VG+G KFW NW G + DL G L + +
Sbjct: 71 VGSGVTAKFWHDNWTGHGPLI----------------------------DLVGPLGPQTV 102
Query: 490 AQFFQLWDEVHTVELNLEEDTIRWKL---SSDGLFTVSSAYSLFFMAREICPFSELIWHI 546
D V ++ +D+ WK + +F+ + I P+ + +W
Sbjct: 103 GLPI---DAVGLIDCQ-HDDSFIWKTDLHAPSNIFSTAKTSLALHPQNHIVPWYKAVWFK 158
Query: 547 KAPSRVRFFLWLAAKGRCLTADNLGKRGWQHEDCCSLCQSEAEDCLHLFVTCAFTRRVWR 606
+ F W+ A R T D L G C LC S E HLF C F VWR
Sbjct: 159 NHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLLCNSHDESRAHLFFECPFCGAVWR 218
Query: 607 MMQGWIGINFLLPTENEPALADWWMKARMAFRTGYRSIFDSVFALTCWLLWKERNARVFE 666
G N P + L W + T I F + +W+ERN +
Sbjct: 219 FFTG--RANLFPPAQLMYCLI-WLLNPSRDKNTTL--IIRLAFQAYVYAIWRERNLCLHT 273
Query: 667 QKFRSMEQLVQDIK 680
R + +++DI+
Sbjct: 274 GVARVFDSVLKDIQ 287
>AT4G20520.1 | chr4:11045912-11047716 FORWARD LENGTH=377
Length = 376
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 52 MARRLATRLDDLVPHTQTAFIKGRSIHENFIFVKGMAQQFHRQK--KEVLLLKLDISKAF 109
M RL + +L+ Q +FI GR +N +FV+ R+K K +LLKLD+ KA+
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 110 DMVSWSFLLNMLKYRGFGPRW 130
D + W +L + L GF W
Sbjct: 61 DRIRWDYLEDTLISAGFPEVW 81
>ATMG01250.1 | chrM:310514-310882 FORWARD LENGTH=123
Length = 122
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 147 INGDDSRAIKPARGLWQGDPLSPLLFVLVMDTLQATLLQAKRQGILSELNTRKRLPNIS- 205
ING + P+RGL QGDPLSP LF+L + L +A+ QG L + P I+
Sbjct: 14 INGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRINH 73
Query: 206 -AYADD 210
+ADD
Sbjct: 74 LLFADD 79
>AT1G60720.1 | chr1:22357072-22357941 FORWARD LENGTH=290
Length = 289
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 23/190 (12%)
Query: 430 VGNGKDTKFWTANWLNGGSIAWRWPVLSTYVGRS-----QLTVAQALTNNRWVRDLQGAL 484
+GNG+ FW +W + G + V+ Y RS V +AL N W + L
Sbjct: 17 LGNGRIAHFWHDSWTSLGPLI---KVMGDYGSRSLRIPLNARVVEALGVNGW----KLPL 69
Query: 485 SNEAMAQFFQLWDEVHTVELNLE---EDTIRWKLSSDGLFTVSSAYSLFFMAREICP--- 538
S A AQ D + T+ ED+ W + SSA + + R P
Sbjct: 70 SRSAPAQAIH--DHISTITTPSPATIEDSFDWVVGGVVCQGFSSART-WDAIRPRAPELD 126
Query: 539 FSELIWHIKAPSRVRFFLWLAAKGRCLTADNLGKRGW-QHEDCCSLCQSEAEDCLHLFVT 597
+++ +W A + F +W++ R T L G Q DCC LC E E HL +
Sbjct: 127 WAKAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCC-LCTIETESRDHLLFS 185
Query: 598 CAFTRRVWRM 607
C F +VWR+
Sbjct: 186 CEFAAQVWRL 195
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.434
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 15,408,564
Number of extensions: 647437
Number of successful extensions: 1904
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 1885
Number of HSP's successfully gapped: 14
Length of query: 700
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 594
Effective length of database: 8,200,473
Effective search space: 4871080962
Effective search space used: 4871080962
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 115 (48.9 bits)