BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0538900 Os11g0538900|AK072950
(472 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G44350.2 | chr2:18316673-18320524 FORWARD LENGTH=475 794 0.0
AT3G60100.1 | chr3:22192888-22196246 FORWARD LENGTH=465 736 0.0
AT2G42790.1 | chr2:17803132-17805991 REVERSE LENGTH=510 113 2e-25
AT3G58750.1 | chr3:21724564-21727458 REVERSE LENGTH=515 107 2e-23
AT3G58740.1 | chr3:21721066-21723726 REVERSE LENGTH=481 82 5e-16
AT2G11270.1 | chr2:4484720-4485308 FORWARD LENGTH=84 60 2e-09
>AT2G44350.2 | chr2:18316673-18320524 FORWARD LENGTH=475
Length = 474
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/473 (78%), Positives = 421/473 (89%), Gaps = 1/473 (0%)
Query: 1 MAFFRGLTAVSRIRSRM-AQEATTLGGVRWLQMQSPSDLDLKSQLQELIPEQQDRLKKLK 59
M FFR ++A +R+RSR+ Q+++ VRW+QMQS +DLDLKSQLQELIPEQQDRLKKLK
Sbjct: 1 MVFFRSVSAFTRLRSRVQGQQSSLSNSVRWIQMQSSTDLDLKSQLQELIPEQQDRLKKLK 60
Query: 60 SEHGKVQLGNITVDMVLGGMRGMIGMLWETSLLDPEEGIRFRGLSIPECQKVLPTAIKXX 119
SEHGKVQLGNITVDMV+GGMRGM G+LWETSLLDPEEGIRFRGLSIPECQKVLPTA
Sbjct: 61 SEHGKVQLGNITVDMVIGGMRGMTGLLWETSLLDPEEGIRFRGLSIPECQKVLPTAQSGA 120
Query: 120 XXXXXXXXXXXXTGKVPTKEQVDALSKELVTRSSVPGHVYKAIDALPVTAHPMTQFTTGV 179
TGKVP+KEQV+ALSK+L R++VP +VY AIDALP TAHPMTQF +GV
Sbjct: 121 EPLPEGLLWLLLTGKVPSKEQVEALSKDLANRAAVPDYVYNAIDALPSTAHPMTQFASGV 180
Query: 180 MALQVESEFQKAYDKGMPKSKFWEPTYEDCLNLIARLPPVASYVYRRIFKDGKTIAADNA 239
MALQV+SEFQKAY+ G+ KSKFWEPTYEDCLNLIAR+P VA+YVYRR++K+G +I +D +
Sbjct: 181 MALQVQSEFQKAYENGIHKSKFWEPTYEDCLNLIARVPVVAAYVYRRMYKNGDSIPSDKS 240
Query: 240 LDYAANFSHMLGFDDPKMLELMRLYVTIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAAL 299
LDY ANFSHMLGFDD K+ ELMRLY+TIH+DHEGGNVSAHTGHLVGSALSDPYLSFAAAL
Sbjct: 241 LDYGANFSHMLGFDDEKVKELMRLYITIHSDHEGGNVSAHTGHLVGSALSDPYLSFAAAL 300
Query: 300 NGLAGPLHGLANQEVLLWIKSVIGETGSDVTTDQLKEYVWKTLKSGKVVPGFGHGVLRKT 359
NGLAGPLHGLANQEVLLWIKSV+ E G D++ +QLKEYVWKTL SGKV+PG+GHGVLR T
Sbjct: 301 NGLAGPLHGLANQEVLLWIKSVVEECGEDISKEQLKEYVWKTLNSGKVIPGYGHGVLRNT 360
Query: 360 DPRYTCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFG 419
DPRY CQREFALK+LP+DPLFQLVSKLYEVVPP+LTELGKVKNPWPNVDAHSGVLLNH+G
Sbjct: 361 DPRYVCQREFALKHLPDDPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYG 420
Query: 420 LSEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCKKAAA 472
L+EARYYTVLFGVSRS+GI SQLIWDRALGL LERPKSVTM+WLE HCKKA++
Sbjct: 421 LTEARYYTVLFGVSRSLGICSQLIWDRALGLALERPKSVTMDWLEAHCKKASS 473
>AT3G60100.1 | chr3:22192888-22196246 FORWARD LENGTH=465
Length = 464
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/469 (75%), Positives = 401/469 (85%), Gaps = 9/469 (1%)
Query: 1 MAFFRGLTAVSRIRSRMAQEATTLGGVRWLQMQSPSDLDLKSQLQELIPEQQDRLKKLKS 60
M FFR ++A+SR+RSR Q+++ VRWL S+LDLKSQ+QE+IPEQQDRLKKLKS
Sbjct: 1 MVFFRSVSAISRLRSRAVQQSSLSNSVRWLH---SSELDLKSQMQEIIPEQQDRLKKLKS 57
Query: 61 EHGKVQLGNITVDMVLGGMRGMIGMLWETSLLDPEEGIRFRGLSIPECQKVLPTAIKXXX 120
E GKV +GNITVDMVLGGMRGM G+LWETSLLD +EGIRFRG+SIPECQK+LP+A
Sbjct: 58 EQGKVPVGNITVDMVLGGMRGMTGLLWETSLLDADEGIRFRGMSIPECQKILPSAESGEE 117
Query: 121 XXXXXXXXXXXTGKVPTKEQVDALSKELVTRSSVPGHVYKAIDALPVTAHPMTQFTTGVM 180
TGKVPTKEQ +ALS EL R++VP AIDALP TAHPMTQF +GVM
Sbjct: 118 PLPESLLWLLLTGKVPTKEQANALSTELAHRAAVP-----AIDALPSTAHPMTQFASGVM 172
Query: 181 ALQVESEFQKAYDKG-MPKSKFWEPTYEDCLNLIARLPPVASYVYRRIFKDGKTIAADNA 239
ALQV+SEFQKAY++G + KSK+WEPT+ED LNLIAR+P VASYVYRR++KDG I D++
Sbjct: 173 ALQVQSEFQKAYEQGDISKSKYWEPTFEDALNLIARVPVVASYVYRRMYKDGSIIPLDDS 232
Query: 240 LDYAANFSHMLGFDDPKMLELMRLYVTIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAAL 299
LDY ANFSHMLGFD P+M ELMRLYVTIH+DHEGGNVSAH GHLVGSALSDPYLSFAAAL
Sbjct: 233 LDYGANFSHMLGFDSPQMKELMRLYVTIHSDHEGGNVSAHAGHLVGSALSDPYLSFAAAL 292
Query: 300 NGLAGPLHGLANQEVLLWIKSVIGETGSDVTTDQLKEYVWKTLKSGKVVPGFGHGVLRKT 359
NGLAGPLHGLANQEVLLWIK V+ E G ++ +QLK+YVWKTL SGKVVPG+GHGVLRKT
Sbjct: 293 NGLAGPLHGLANQEVLLWIKLVVEECGESISKEQLKDYVWKTLNSGKVVPGYGHGVLRKT 352
Query: 360 DPRYTCQREFALKYLPEDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFG 419
DPRY CQREFALK+LP+DPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLN++G
Sbjct: 353 DPRYICQREFALKHLPDDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNYYG 412
Query: 420 LSEARYYTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMEWLENHCK 468
L+EARYYTVLFGVSRS+GI SQLIWDRALGLPLERPKSV M+WL+N +
Sbjct: 413 LTEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVNMDWLDNFTR 461
>AT2G42790.1 | chr2:17803132-17805991 REVERSE LENGTH=510
Length = 509
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 174/401 (43%), Gaps = 54/401 (13%)
Query: 90 SLLDPEEGI-RFRGLSIPECQKVLPTAIKXXXXXXXXXXXXXXTGKVPTKEQVDALSKEL 148
S +D +EGI R+RG I E + G +P++ Q+ +
Sbjct: 105 SYIDGDEGILRYRGYPIEEMAE---------NSTFLEVAYLLMYGNLPSESQLSDWEFAV 155
Query: 149 VTRSSVPGHVYKAIDALPVTAHPMTQFTTGVMALQV-------ESEFQKAYDKGMPKSKF 201
S+VP V I ++P AHPM + + AL + Q YD + K
Sbjct: 156 SQHSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALRGQDIYDSKQVRDK- 214
Query: 202 WEPTYEDCLNLIARLPPVASYVYRRIFKDGKTIAADNALDYAANFSHMLGF-------DD 254
+ +I + P +A+ Y R+ + + N L YA NF +ML +
Sbjct: 215 ------QIIRIIGKAPTIAAAAYLRMAGRPPVLPSGN-LPYADNFLYMLDSLGNRSYKPN 267
Query: 255 PKMLELMRLYVTIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEV 314
P++ ++ + +H +HE +A HL S + D Y + A A+ L GPLHG AN+ V
Sbjct: 268 PRLARVLDILFILHAEHEMNCSTAAARHLASSGV-DVYTAVAGAVGALYGPLHGGANEAV 326
Query: 315 LLWIKSVIGETGSDVTTDQLKEYVWKTLKSGKVVPGFGHGVLRKTDPRYTCQREFA---L 371
L ++ E G T + + E++ + + GFGH V + DPR + A
Sbjct: 327 L----KMLSEIG---TVENIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKNLADEVF 379
Query: 372 KYLPEDPLFQLVSKLYEVVPPILTELGKVKNP-WPNVDAHSGVLLNHFGLSEARYYTVLF 430
+ +DPL ++ L + L++ VK +PNVD +SG++ G ++TVLF
Sbjct: 380 SIVGKDPLIEVAVALEKAA---LSDDYFVKRKLYPNVDFYSGLIYRAMGFP-PEFFTVLF 435
Query: 431 GVSRSIGIGSQLIWDRALGLP---LERPKSV-TMEWLENHC 467
+ R G S W +L P + RP+ V T WL ++
Sbjct: 436 AIPRMAGYLSH--WKESLDDPDTKIMRPQQVYTGVWLRHYT 474
>AT3G58750.1 | chr3:21724564-21727458 REVERSE LENGTH=515
Length = 514
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 169/390 (43%), Gaps = 38/390 (9%)
Query: 92 LDPEEGI-RFRGLSIPECQKVLPTAIKXXXXXXXXXXXXXXTGKVPTKEQVDALSKELVT 150
+D +EGI R+RG I E + G +P++ Q+ +
Sbjct: 112 IDGDEGILRYRGYPIEELAE---------SSTFIEVAYLLMYGNLPSQSQLADWEFTVSQ 162
Query: 151 RSSVPGHVYKAIDALPVTAHPMTQFTTGVMALQVESEFQKAYDKGMPKSKFWEPTYEDCL 210
S+VP V I ++P AHPM + + AL + G K + + +
Sbjct: 163 HSAVPQGVLDIIQSMPHDAHPMGVLVSAMSALSIFHPDANPALSGQDIYKSKQVRDKQIV 222
Query: 211 NLIARLPPVASYVYRRIFKDGKTIAADNALDYAANFSHMLGF-------DDPKMLELMRL 263
++ + P +A+ Y R + + N L Y+ NF +ML +P++ ++ +
Sbjct: 223 RILGKAPTIAAAAYLRTAGRPPVLPSAN-LSYSENFLYMLDSMGNRSYKPNPRLARVLDI 281
Query: 264 YVTIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVIG 323
+H +HE +A HL S + D Y + A A+ L GPLHG AN+ VL ++
Sbjct: 282 LFILHAEHEMNCSTAAARHLASSGV-DVYTACAGAVGALYGPLHGGANEAVL----KMLA 336
Query: 324 ETGSDVTTDQLKEYVWKTLKSGKVVPGFGHGVLRKTDPRYTCQREFA---LKYLPEDPLF 380
E G T + + +++ + + GFGH V + DPR ++ A + DPL
Sbjct: 337 EIG---TAENIPDFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLADEVFSIVGRDPLI 393
Query: 381 QLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGLSEARYYTVLFGVSRSIGIGS 440
++ L + + E + +PNVD +SG++ G ++TVLF V R G S
Sbjct: 394 EVAVALEKAA--LSDEYFVKRKLYPNVDFYSGLIYRAMGFPP-EFFTVLFAVPRMAGYLS 450
Query: 441 QLIWDRALGLP---LERP-KSVTMEWLENH 466
W +L P + RP ++ T W+ ++
Sbjct: 451 H--WRESLDDPDTRIMRPQQAYTGVWMRHY 478
>AT3G58740.1 | chr3:21721066-21723726 REVERSE LENGTH=481
Length = 480
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 163/385 (42%), Gaps = 45/385 (11%)
Query: 90 SLLDPEEGI-RFRGLSIPE-CQKVLPTAIKXXXXXXXXXXXXXXTGKVPTKEQVDALSKE 147
S +D +EGI R+RG + E +K T + G +P++ Q+
Sbjct: 107 SYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIY----------GNLPSQRQLADWEFA 156
Query: 148 LVTRSSVPGHVYKAIDALPVTAHPMTQFTTGVMALQVESEFQKAYDKGMPKSKFWEPTYE 207
+ S+VP V I ++P HP+ T + AL + G+ K + +
Sbjct: 157 ISQNSAVPQGVLDMIQSMPNDVHPVGALVTAMSALSIFYPDANPSLMGLGVYKSKQVRDK 216
Query: 208 DCLNLIARLPPVASYVYRRIFKDGK-TIAADNALDYAANFSHMLGF-------DDPKMLE 259
+ ++ + P +A+ Y R K GK + + L Y+ NF +M+ +P++
Sbjct: 217 QIVRVLGQAPTIAAAAYLR--KAGKPPVQPLSNLSYSENFLYMVESMGDRSYKPNPRLAR 274
Query: 260 LMRLYVTIHTDHEGGNVSAHTGHLVGSALSDPYLSFAAALNGLAGPLHGLANQEVLLWIK 319
++ + + +HE +A HL S D Y + + + + GPLHG A + +
Sbjct: 275 VLDILFILQAEHEMNCSTAAARHLSSSG-GDVYTAVSGGVGAIYGPLHGGAVEATI---- 329
Query: 320 SVIGETGSDVTTDQLKEYVWKTLKSGKVVPGFGHGVLRKTDPRYTCQREFA---LKYLPE 376
+++ E G T + + E++ + + GFGH + + DPR ++ A L
Sbjct: 330 NMLSEIG---TVENIPEFIESVKNKKRRLSGFGHRIYKNYDPRGKVVKKLADEVFSILGR 386
Query: 377 DPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNHFGLSEARYYTVLFGVSRSI 436
DPL ++ L + + E + +PNVD +SG++ G+ + VSR
Sbjct: 387 DPLVEVGDALEKAA--LSDEYFVKRKLYPNVDFYSGLINRAMGIPSS-----FTAVSRIA 439
Query: 437 GIGSQLIWDRALGLP---LERPKSV 458
G S W +L P + RP+ V
Sbjct: 440 GYLSH--WRESLDDPDTKIMRPQQV 462
>AT2G11270.1 | chr2:4484720-4485308 FORWARD LENGTH=84
Length = 83
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 52 QDRLKKLKSEHGKVQLGNITVDMVLGGMRGMIGM 85
QDR KKLK +HGKV +GNITVDMVLGGMRGM G+
Sbjct: 43 QDRSKKLKLKHGKVPVGNITVDMVLGGMRGMTGL 76
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.136 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,058,289
Number of extensions: 414030
Number of successful extensions: 989
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 972
Number of HSP's successfully gapped: 6
Length of query: 472
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 370
Effective length of database: 8,310,137
Effective search space: 3074750690
Effective search space used: 3074750690
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)