BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0530600 Os11g0530600|AB000801
(398 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396 677 0.0
AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393 297 6e-81
AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386 288 4e-78
AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396 279 2e-75
>AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396
Length = 395
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/376 (84%), Positives = 352/376 (93%), Gaps = 1/376 (0%)
Query: 18 GPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTE 77
GPA +LAIGTA P N V QA+YPDYYFRIT SEHM +LKEKFKRMCDKS IRKR+MHLTE
Sbjct: 20 GPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTE 79
Query: 78 EILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSG 137
E L+ENP+MCAYMAPSLD RQDIVVVEVPKLGK AA KAIKEWGQP+S+ITH+VFCTTSG
Sbjct: 80 EFLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSG 139
Query: 138 VDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEIT 197
VDMPGADYQL K+LGLRP+V RLMMYQQGCFAGGTVLR+AKDLAENNRGARVL VCSEIT
Sbjct: 140 VDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEIT 199
Query: 198 AVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPDEAV-ERPLFQMVSASQTILPDSEGA 256
AVTFRGPS++HLDS+VGQALF DGAAA+IVGSDPD +V E+P+F+MVSA+QTILPDS+GA
Sbjct: 200 AVTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGA 259
Query: 257 IDGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGISDWNSIFWVAHPGGPAILDQV 316
IDGHLREVGLTFHLLKDVPGLISKNI ++L +AF PLGISDWNS+FW+AHPGGPAILDQV
Sbjct: 260 IDGHLREVGLTFHLLKDVPGLISKNIVKSLDEAFKPLGISDWNSLFWIAHPGGPAILDQV 319
Query: 317 EAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFGF 376
E K+GL +E+MRATRHVLSEYGNMSSACVLFILDEMR++SA+DG ATTGEG++WGVLFGF
Sbjct: 320 EIKLGLKEEKMRATRHVLSEYGNMSSACVLFILDEMRRKSAKDGVATTGEGLEWGVLFGF 379
Query: 377 GPGLTVETVVLHSVPI 392
GPGLTVETVVLHSVP+
Sbjct: 380 GPGLTVETVVLHSVPL 395
>AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393
Length = 392
Score = 297 bits (761), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 231/377 (61%), Gaps = 4/377 (1%)
Query: 18 GPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTE 77
G AT+LA+G A P V Q D YF+ TK + ELK+K R+C + ++ RY+ ++E
Sbjct: 18 GKATILALGKAFPHQLVMQEYLVDGYFKTTKCDD-PELKQKLTRLCKTTTVKTRYVVMSE 76
Query: 78 EILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSG 137
EIL++ P + ++ R DI V ++ A++ IK WG+ S ITH+V+ ++S
Sbjct: 77 EILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISDITHVVYVSSSE 136
Query: 138 VDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEIT 197
+PG D LAK LGL P+ +R+++Y GC G LRVAKD+AENN G+RVL SE T
Sbjct: 137 ARLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETT 196
Query: 198 AVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPDEAVERPLFQMVSASQTILPDSEGAI 257
+ F+ PS +VG ALFGDGA A+I+GSDPD E+PLF++ +A Q LP++E I
Sbjct: 197 IIGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPICEKPLFELHTAIQNFLPETEKTI 256
Query: 258 DGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGIS--DWNSIFWVAHPGGPAILDQ 315
DG L E G+ F L +++P +I N+E G++ ++N +FW HPGGPAIL++
Sbjct: 257 DGRLTEQGINFKLSRELPQIIEDNVENFCKKLIGKAGLAHKNYNQMFWAVHPGGPAILNR 316
Query: 316 VEAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFG 375
+E ++ L E++ +R L +YGN SS ++++L+ M + S + + E +WG++
Sbjct: 317 IEKRLNLSPEKLSPSRRALMDYGNASSNSIVYVLEYMLEESKKVRNMNEEEN-EWGLILA 375
Query: 376 FGPGLTVETVVLHSVPI 392
FGPG+T E ++ ++ +
Sbjct: 376 FGPGVTFEGIIARNLDV 392
>AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386
Length = 385
Score = 288 bits (736), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 224/375 (59%), Gaps = 8/375 (2%)
Query: 18 GPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTE 77
G ATVLA+G A P+N V Q + + Y R K +++ +K+K + +C + ++ RY ++
Sbjct: 17 GKATVLALGKALPSNVVSQENLVEEYLREIKCDNL-SIKDKLQHLCKSTTVKTRYTVMSR 75
Query: 78 EILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSG 137
E L + P + +P++ R +I V ++ A+ IKEWG+ ITHLV+ ++S
Sbjct: 76 ETLHKYPELATEGSPTIKQRLEIANDAVVQMAYEASLVCIKEWGRAVEDITHLVYVSSSE 135
Query: 138 VDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEIT 197
+PG D L+ LGL V R+M+Y GC+ G + LRVAKD+AENN G+RVL SE T
Sbjct: 136 FRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDIAENNPGSRVLLTTSETT 195
Query: 198 AVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPDEAVERPLFQMVSASQTILPDSEGAI 257
+ FR P+++ ++VG ALFGDGAAA+I+G+DP E+ E P ++ A Q LP ++G I
Sbjct: 196 VLGFRPPNKARPYNLVGAALFGDGAAALIIGADPTES-ESPFMELHCAMQQFLPQTQGVI 254
Query: 258 DGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGIS--DWNSIFWVAHPGGPAILDQ 315
DG L E G+TF L +D+P I N+E G + N +FW HPGGPAIL
Sbjct: 255 DGRLSEEGITFKLGRDLPQKIEDNVEEFCKKLVAKAGSGALELNDLFWAVHPGGPAILSG 314
Query: 316 VEAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFG 375
+E K+ L E++ +R L +YGN+SS + +I+D++R + G EG +WG+
Sbjct: 315 LETKLKLKPEKLECSRRALMDYGNVSSNTIFYIMDKVRDELEKKGT----EGEEWGLGLA 370
Query: 376 FGPGLTVETVVLHSV 390
FGPG+T E ++ ++
Sbjct: 371 FGPGITFEGFLMRNL 385
>AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396
Length = 395
Score = 279 bits (713), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 231/375 (61%), Gaps = 8/375 (2%)
Query: 18 GPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTE 77
G AT+LA+G A P+ V Q + + + R TK + +KEK + +C + ++ RY LT
Sbjct: 24 GKATLLALGKAFPSQVVPQENLVEGFLRDTKCDDAF-IKEKLEHLCKTTTVKTRYTVLTR 82
Query: 78 EILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSG 137
EIL + P + +P++ R +I V ++ A+ IKEWG+P ITH+V+ ++S
Sbjct: 83 EILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLGCIKEWGRPVEDITHIVYVSSSE 142
Query: 138 VDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLAVCSEIT 197
+ +PG D L+ LGLR +VNR+M+Y GC+ G T LRVAKD+AENN G+RVL SE T
Sbjct: 143 IRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
Query: 198 AVTFRGPSESHLDSMVGQALFGDGAAAVIVGSDPDEAVERPLFQMVSASQTILPDSEGAI 257
+ FR P+++ +VG ALFGDGAAAVI+G+DP E E P ++ A Q LP ++ I
Sbjct: 203 ILGFRPPNKARPYDLVGAALFGDGAAAVIIGADPREC-EAPFMELHYAVQQFLPGTQNVI 261
Query: 258 DGHLREVGLTFHLLKDVPGLISKNIERALGDAFTPLGIS--DWNSIFWVAHPGGPAILDQ 315
+G L E G+ F L +D+P I +NIE G ++N +FW HPGGPAIL++
Sbjct: 262 EGRLTEEGINFKLGRDLPQKIEENIEEFCKKLMGKAGDESMEFNDMFWAVHPGGPAILNR 321
Query: 316 VEAKVGLDKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGHATTGEGMDWGVLFG 375
+E K+ L+KE++ ++R L +YGN+SS +L++++ MR + G A +WG+
Sbjct: 322 LETKLKLEKEKLESSRRALVDYGNVSSNTILYVMEYMRDELKKKGDA----AQEWGLGLA 377
Query: 376 FGPGLTVETVVLHSV 390
FGPG+T E +++ S+
Sbjct: 378 FGPGITFEGLLIRSL 392
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.135 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,239,436
Number of extensions: 338653
Number of successful extensions: 802
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 792
Number of HSP's successfully gapped: 4
Length of query: 398
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 297
Effective length of database: 8,337,553
Effective search space: 2476253241
Effective search space used: 2476253241
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)