BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0529800 Os11g0529800|Os11g0529800
(401 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396 246 1e-65
AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393 192 3e-49
AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386 182 3e-46
AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396 157 9e-39
>AT5G13930.1 | chr5:4488762-4490035 FORWARD LENGTH=396
Length = 395
Score = 246 bits (628), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/379 (37%), Positives = 188/379 (49%), Gaps = 9/379 (2%)
Query: 8 AAVLAIGTANPAKCVVAQEEFVDWYFRVTQSDHLPDLKAKMKRMCDKSAIKKRHFYHSEE 67
A +LAIGTANP V+ Q E+ D+YFR+T S+H+ DLK K KRMCDKS I+KRH + +EE
Sbjct: 22 AGILAIGTANPENHVL-QAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEE 80
Query: 68 TIAGHPEFINRALPSLDARLGIAKDXXXXXXXXXXXXXXXXXXXXXXDVTHLVVSTNXXX 127
+ +P PSLD R I +TH+V T
Sbjct: 81 FLKENPHMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGV 140
Query: 128 XXXXXXXXXXXXXXXXXTVQRAVLYMHGCNAGCTALRLAKDIAENNRGARVLVACAEVTL 187
+V+R ++Y GC AG T LR+AKD+AENNRGARVLV C+E+T
Sbjct: 141 DMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITA 200
Query: 188 PLFAAPYEARLDALVAMALFXXXXXXXXXXXXPTTPV-EHPIFHVVSASQATIPGTEEGV 246
F P + LD+LV ALF P T V E PIF +VSA+Q +P ++ +
Sbjct: 201 VTFRGPSDTHLDSLVGQALFSDGAAALIVGSDPDTSVGEKPIFEMVSAAQTILPDSDGAI 260
Query: 247 SLLLGERGLDCRISGEVAALVRGGVERCXXXXXXXXXXXXXXXXWNHLFWAMHPGGRAIL 306
L E GL + +V L+ + + WN LFW HPGG AIL
Sbjct: 261 DGHLREVGLTFHLLKDVPGLISKNIVKS----LDEAFKPLGISDWNSLFWIAHPGGPAIL 316
Query: 307 DAYEAALRLEPGKLAASRRVLSEYGNMSCAAIIFVXXXXXXXXXXXXXXXXXXXXXXXXW 366
D E L L+ K+ A+R VLSEYGNMS A ++F+ W
Sbjct: 317 DQVEIKLGLKEEKMRATRHVLSEYGNMSSACVLFI---LDEMRRKSAKDGVATTGEGLEW 373
Query: 367 GAMVGLGPGLTIETIVLRA 385
G + G GPGLT+ET+VL +
Sbjct: 374 GVLFGFGPGLTVETVVLHS 392
>AT4G34850.1 | chr4:16608349-16609720 FORWARD LENGTH=393
Length = 392
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 174/377 (46%), Gaps = 8/377 (2%)
Query: 8 AAVLAIGTANPAKCVVAQEEFVDWYFRVTQSDHLPDLKAKMKRMCDKSAIKKRHFYHSEE 67
A +LA+G A P + V+ QE VD YF+ T+ D P+LK K+ R+C + +K R+ SEE
Sbjct: 20 ATILALGKAFPHQLVM-QEYLVDGYFKTTKCDD-PELKQKLTRLCKTTTVKTRYVVMSEE 77
Query: 68 TIAGHPEFINRALPSLDARLGIAKDXXXXXXXXXXXXXXXXXXXXXXDVTHLVVSTNXXX 127
+ +PE ++ RL I D D+TH+V ++
Sbjct: 78 ILKKYPELAIEGGSTVTQRLDICNDAVTEMAVEASRACIKNWGRSISDITHVVYVSSSEA 137
Query: 128 XXXXXXXXXXXXXXXXXTVQRAVLYMHGCNAGCTALRLAKDIAENNRGARVLVACAEVTL 187
R +LY GC+ G LR+AKDIAENN G+RVL+A +E T+
Sbjct: 138 RLPGGDLYLAKGLGLSPDTHRVLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETTI 197
Query: 188 PLFAAPYEARLDALVAMALFXXXXXXXXXXXXPTTPVEHPIFHVVSASQATIPGTEEGVS 247
F P R LV +ALF P E P+F + +A Q +P TE+ +
Sbjct: 198 IGFKPPSVDRPYDLVGVALFGDGAGAMIIGSDPDPICEKPLFELHTAIQNFLPETEKTID 257
Query: 248 LLLGERGLDCRISGEVAALVRGGVERCXXXXXXXXXXXXXXXXWNHLFWAMHPGGRAILD 307
L E+G++ ++S E+ ++ VE +N +FWA+HPGG AIL+
Sbjct: 258 GRLTEQGINFKLSRELPQIIEDNVEN--FCKKLIGKAGLAHKNYNQMFWAVHPGGPAILN 315
Query: 308 AYEAALRLEPGKLAASRRVLSEYGNMSCAAIIFVXXXXXXXXXXXXXXXXXXXXXXXXWG 367
E L L P KL+ SRR L +YGN S +I++V WG
Sbjct: 316 RIEKRLNLSPEKLSPSRRALMDYGNASSNSIVYV----LEYMLEESKKVRNMNEEENEWG 371
Query: 368 AMVGLGPGLTIETIVLR 384
++ GPG+T E I+ R
Sbjct: 372 LILAFGPGVTFEGIIAR 388
>AT4G00040.1 | chr4:14653-15897 FORWARD LENGTH=386
Length = 385
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 169/382 (44%), Gaps = 12/382 (3%)
Query: 3 ARQQHAAVLAIGTANPAKCVVAQEEFVDWYFRVTQSDHLPDLKAKMKRMCDKSAIKKRHF 62
A Q A VLA+G A P+ VV+QE V+ Y R + D+L +K K++ +C + +K R+
Sbjct: 14 AYQGKATVLALGKALPSN-VVSQENLVEEYLREIKCDNL-SIKDKLQHLCKSTTVKTRYT 71
Query: 63 YHSEETIAGHPEFINRALPSLDARLGIAKDXXXXXXXXXXXXXXXXXXXXXXDVTHLVVS 122
S ET+ +PE P++ RL IA D D+THLV
Sbjct: 72 VMSRETLHKYPELATEGSPTIKQRLEIANDAVVQMAYEASLVCIKEWGRAVEDITHLVYV 131
Query: 123 TNXXXXXXXXXXXXXXXXXXXXTVQRAVLYMHGCNAGCTALRLAKDIAENNRGARVLVAC 182
++ VQR +LY GC G + LR+AKDIAENN G+RVL+
Sbjct: 132 SSSEFRLPGGDLYLSAQLGLSNEVQRVMLYFLGCYGGLSGLRVAKDIAENNPGSRVLLTT 191
Query: 183 AEVTLPLFAAPYEARLDALVAMALFXXXXXXXXXXXXPTTPVEHPIFHVVSASQATIPGT 242
+E T+ F P +AR LV ALF PT E P + A Q +P T
Sbjct: 192 SETTVLGFRPPNKARPYNLVGAALFGDGAAALIIGADPTES-ESPFMELHCAMQQFLPQT 250
Query: 243 EEGVSLLLGERGLDCRISGEVAALVRGGVERCXXXXXXXXXXXXXXXXWNHLFWAMHPGG 302
+ + L E G+ ++ ++ + VE N LFWA+HPGG
Sbjct: 251 QGVIDGRLSEEGITFKLGRDLPQKIEDNVEE--FCKKLVAKAGSGALELNDLFWAVHPGG 308
Query: 303 RAILDAYEAALRLEPGKLAASRRVLSEYGNMSCAAIIFVXXXXXXXXXXXXXXXXXXXXX 362
AIL E L+L+P KL SRR L +YGN+S I ++
Sbjct: 309 PAILSGLETKLKLKPEKLECSRRALMDYGNVSSNTIFYI-------MDKVRDELEKKGTE 361
Query: 363 XXXWGAMVGLGPGLTIETIVLR 384
WG + GPG+T E ++R
Sbjct: 362 GEEWGLGLAFGPGITFEGFLMR 383
>AT1G02050.1 | chr1:359164-360441 REVERSE LENGTH=396
Length = 395
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 173/384 (45%), Gaps = 14/384 (3%)
Query: 3 ARQQHAAVLAIGTANPAKCVVAQEEFVDWYFRVTQSDHLPDLKAKMKRMCDKSAIKKRHF 62
A A +LA+G A P++ VV QE V+ + R T+ D +K K++ +C + +K R+
Sbjct: 21 ANAGKATLLALGKAFPSQ-VVPQENLVEGFLRDTKCDD-AFIKEKLEHLCKTTTVKTRYT 78
Query: 63 YHSEETIAGHPEFINRALPSLDARLGIAKDXXXXXXXXXXXXXXXXXXXXXXDVTHLVVS 122
+ E +A +PE P++ RL IA + D+TH+V
Sbjct: 79 VLTREILAKYPELTTEGSPTIKQRLEIANEAVVEMALEASLGCIKEWGRPVEDITHIVYV 138
Query: 123 TNXXXXXXXXXXXXXXXXXXXXTVQRAVLYMHGCNAGCTALRLAKDIAENNRGARVLVAC 182
++ V R +LY GC G T LR+AKDIAENN G+RVL+
Sbjct: 139 SSSEIRLPGGDLYLSAKLGLRNDVNRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTT 198
Query: 183 AEVTLPLFAAPYEARLDALVAMALFXXXXXXXXXXXXPTTPVEHPIFHVVSASQATIPGT 242
+E T+ F P +AR LV ALF P E P + A Q +PGT
Sbjct: 199 SETTILGFRPPNKARPYDLVGAALFGDGAAAVIIGADPRE-CEAPFMELHYAVQQFLPGT 257
Query: 243 EEGVSLLLGERGLDCRISGEVAALVRGGVER-CXXXXXXXXXXXXXXXXWNHLFWAMHPG 301
+ + L E G++ ++ ++ + +E C +N +FWA+HPG
Sbjct: 258 QNVIEGRLTEEGINFKLGRDLPQKIEENIEEFC---KKLMGKAGDESMEFNDMFWAVHPG 314
Query: 302 GRAILDAYEAALRLEPGKLAASRRVLSEYGNMSCAAIIFVXXXXXXXXXXXXXXXXXXXX 361
G AIL+ E L+LE KL +SRR L +YGN+S I++V
Sbjct: 315 GPAILNRLETKLKLEKEKLESSRRALVDYGNVSSNTILYV-------MEYMRDELKKKGD 367
Query: 362 XXXXWGAMVGLGPGLTIETIVLRA 385
WG + GPG+T E +++R+
Sbjct: 368 AAQEWGLGLAFGPGITFEGLLIRS 391
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,031,677
Number of extensions: 179615
Number of successful extensions: 396
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 379
Number of HSP's successfully gapped: 4
Length of query: 401
Length of database: 11,106,569
Length adjustment: 101
Effective length of query: 300
Effective length of database: 8,337,553
Effective search space: 2501265900
Effective search space used: 2501265900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 113 (48.1 bits)