BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0528400 Os11g0528400|AK069554
(503 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19340.1 | chr3:6701387-6704071 REVERSE LENGTH=488 723 0.0
AT5G13940.1 | chr5:4490263-4495585 REVERSE LENGTH=810 535 e-152
AT2G46915.1 | chr2:19274018-19277707 REVERSE LENGTH=709 103 3e-22
>AT3G19340.1 | chr3:6701387-6704071 REVERSE LENGTH=488
Length = 487
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/481 (70%), Positives = 409/481 (85%)
Query: 23 KEVIRLERESVIPILKPKLIMKLAYLVEQDKDRGEFLKLCRRVEYTIRAWYLLQFEDLMQ 82
KEVIRLE ESVIPILKPKLIM LA L+E DR EFLKLC+R+EYT+RAWYLLQFEDLMQ
Sbjct: 7 KEVIRLEPESVIPILKPKLIMTLANLIEHSNDRQEFLKLCKRIEYTVRAWYLLQFEDLMQ 66
Query: 83 LYALFDPVNGVKSLEQQSLTPDEIETLELNFLTYMFQIMEKSNFKLLSDEEYDVAQSGQY 142
LY+LFDPV+G + ++QQ+LT EI+ LE NFL Y+FQ+MEKSNFK+ S+EE +VA SGQY
Sbjct: 67 LYSLFDPVHGAQKIQQQNLTSQEIDVLEQNFLAYLFQVMEKSNFKITSNEEMEVAHSGQY 126
Query: 143 LLNLPIKVDESKVDKKLLTRYFKAHPHDNLPASVDKYIIFRRGIGIDRTTDYFFMEKVDV 202
LLNLPIKVDESK+DKKLL RYF+ HPH+N+P DKY+IFRRGIG+D+TTDYFFMEK+DV
Sbjct: 127 LLNLPIKVDESKLDKKLLKRYFEEHPHENIPDFSDKYVIFRRGIGLDKTTDYFFMEKLDV 186
Query: 203 IISRVWRSLLRVTKIDRLFSKKKQLRAKKDPKKTDXXXXXXXXXXXXXXRIRLEKMELSI 262
IISR W L+R+T++++L +K+ KKDPKK D RIRLE +LS
Sbjct: 187 IISRFWSFLMRITRLEKLRAKRSSSLNKKDPKKDDEPNPDTDNDELYVERIRLENSKLSF 246
Query: 263 KNLLSQMTIQEPTFERMIVVYRKSSTEAKPDRGIFVKHFKNIPMADMELVLPEKKNPSLT 322
K+ LS++TIQEPTF+RMIVVYR++S++ +RGI+VKHFKNIPMADME+VLPEK+NP LT
Sbjct: 247 KSFLSKLTIQEPTFDRMIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLT 306
Query: 323 PMDWVKFLISAVLGLVTLIGSLEMPKADIWVVIAILSGLIGYCAKIYFTFQANMVSYQNL 382
PMDWVKFLISAV+GLV ++ S+EMPK+D WV+IAILS ++GYCAK YFTFQ NM +YQNL
Sbjct: 307 PMDWVKFLISAVVGLVAVLTSVEMPKSDPWVIIAILSTVLGYCAKTYFTFQQNMATYQNL 366
Query: 383 ITKSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSYYILMEQGKATVQDLDLRCEQLIKE 442
IT+SMYDKQLDSG+GTLLHLCDDVIQQEVKEV++ +YILMEQGKAT++DLDLRCE+LIKE
Sbjct: 367 ITQSMYDKQLDSGRGTLLHLCDDVIQQEVKEVMICFYILMEQGKATLEDLDLRCEELIKE 426
Query: 443 EFGVECNFDVVDAVKKLEKLGIVSRDSIGRIVCVPLKRANDIIGQTTEEMVMRAQQASTG 502
EFG CNFDV DAV+KLEKLGIV+RD+IGR C+ LKRAN+IIG TTEE+V++A+Q T
Sbjct: 427 EFGARCNFDVEDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTP 486
Query: 503 S 503
S
Sbjct: 487 S 487
>AT5G13940.1 | chr5:4490263-4495585 REVERSE LENGTH=810
Length = 809
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/462 (56%), Positives = 342/462 (74%), Gaps = 10/462 (2%)
Query: 43 MKLAYLVEQDKDRGEFLKLCRRVEYTIRAWYLLQFEDLMQLYALFDPVNGVKSLEQQSLT 102
+K Y ++ +R EFL+ C+RVE TIRAWY L FEDLMQLY+LF+PV G L QQ+L+
Sbjct: 315 IKREYNIKDKWEREEFLRFCQRVECTIRAWYHLHFEDLMQLYSLFEPVRGAHRLNQQNLS 374
Query: 103 PDEIETLELNFLTYMFQIMEKSNFKLLSDEEYDVAQSGQYLLNLPIKVDESKVDKKLLTR 162
EI+ LE FL ++FQ+MEKSNFK++++EE VA S QY LNLPI V+E+K+D KLLTR
Sbjct: 375 TREIDALEDQFLLHLFQVMEKSNFKVITNEEIQVALSAQYRLNLPIVVNEAKLDTKLLTR 434
Query: 163 YFKAHPHDNLPASVDKYIIFRRGIGIDRTTDYFFMEKVDVIISRVWRSLLRVTKIDRLFS 222
YF P D+LP DKYIIFRRG GID YFF+ K+D I+ R+W LL +T + RL
Sbjct: 435 YFSKFPRDDLPHFADKYIIFRRGFGIDHMKAYFFLAKIDTILVRIWHFLLTITCLKRLVY 494
Query: 223 KKKQ---LRAKKDPKKTDXXXXXXXXXXXXXXRIRLEKMELSIKNLLSQMTIQEPTFERM 279
KK L + D RIR+EK++LS+ NL+ ++TIQEPTFER+
Sbjct: 495 GKKNDVGLSEQID------ISIETEKDSLYIERIRIEKLKLSLSNLMKKITIQEPTFERI 548
Query: 280 IVVYRKSSTEAKPDRGIFVKHFKNIPMADMELVLPEKKNPSLTPMDWVKFLISAVLGLVT 339
IVVYR+ S + + +R I+VKHFK IPMADME+VLPEKKNP LTP+DWVKFL+SA +GLVT
Sbjct: 549 IVVYRRVSGKKESERNIYVKHFKTIPMADMEIVLPEKKNPGLTPLDWVKFLVSAAIGLVT 608
Query: 340 LIGSLEMPKADIWVVIAILSGLIGYCAKIYFTFQANMVSYQNLITKSMYDKQLDSGKGTL 399
++ S+ + KADI V+ AILS ++ YC K YFTFQ N+V YQ+LIT+S+YDKQLDSG+GTL
Sbjct: 609 VVSSVSLKKADIRVIAAILSTVVAYCVKTYFTFQRNLVDYQSLITRSVYDKQLDSGRGTL 668
Query: 400 LHLCDDVIQQEVKEVIVSYYILMEQGKATV-QDLDLRCEQLIKEEFGVECNFDVVDAVKK 458
LHLCD+VIQQEVKEVI+S+++L+++G T ++LD++ E IKEEF CNFDV DA+ K
Sbjct: 669 LHLCDEVIQQEVKEVIISFFMLIKKGCPTSKEELDMKSEAFIKEEFNESCNFDVDDAITK 728
Query: 459 LEKLGIVSRDSIGRIVCVPLKRANDIIGQTTEEMVMRAQQAS 500
LEKLG+VSRDS + CV +K AN+I+G TTEEMV++A+Q
Sbjct: 729 LEKLGLVSRDSEDKYRCVEMKEANEIMGTTTEEMVLKARQGG 770
>AT2G46915.1 | chr2:19274018-19277707 REVERSE LENGTH=709
Length = 708
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 133/245 (54%), Gaps = 22/245 (8%)
Query: 256 EKMELSIKNLLSQMTIQEPTFERMIVVYRKSSTEAKPDRG-------IFVKHFKNIPMAD 308
++++ SI LLS T+QEP FE +I++Y K ++E K D+ + ++ F+ IP+ D
Sbjct: 454 KRIKTSISILLSPSTLQEPAFEELILLYTKDASE-KDDKNKDETRSSLQLEIFERIPIPD 512
Query: 309 MELVLPEKKNPSLTPMDWVKFLISAVLGLVTLIGSLEM------PKADIWVVIAILSGLI 362
+ ++ P KK +D V+ I+++LGL + + P A VIA+ + L+
Sbjct: 513 LPVIFPHKK-LYFRIIDTVRLDIASILGLTAYFVNYKFENISSSPSAFFLDVIAV-TALV 570
Query: 363 GYCAKIYFTFQANMVSYQNLITKSMYDKQLDSGKGTLLHLCDDVIQQEVKEVIVSYYILM 422
Y ++ ++ YQ L+ K++Y+K L SG G++ L D QQ+ KE I++Y I++
Sbjct: 571 IYATRVVLGYKQTWDRYQLLVNKTLYEKTLASGFGSVHFLLDASEQQQYKEAILTYAIIL 630
Query: 423 EQGKA---TVQDLDLRCEQLIKEEFGVECNFDVVDAVKKLEKLGIVSR---DSIGRIVCV 476
+ GK + + + RCE+ + + F ++ V A+ L +LG+V+ DS ++ V
Sbjct: 631 QAGKNQNMSYKGVGDRCERFMYDTFKIKVEMRVEKAISTLVRLGLVTETLVDSNTKLQAV 690
Query: 477 PLKRA 481
P +A
Sbjct: 691 PCPQA 695
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.138 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,668,038
Number of extensions: 397873
Number of successful extensions: 967
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 962
Number of HSP's successfully gapped: 3
Length of query: 503
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 400
Effective length of database: 8,282,721
Effective search space: 3313088400
Effective search space used: 3313088400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)