BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0525700 Os11g0525700|AK073354
(644 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G61910.1 | chr5:24861091-24863729 REVERSE LENGTH=739 139 4e-33
AT2G32910.1 | chr2:13959685-13961989 FORWARD LENGTH=692 126 4e-29
AT2G35140.1 | chr2:14813990-14816808 FORWARD LENGTH=880 99 7e-21
AT3G11000.2 | chr3:3447847-3450283 FORWARD LENGTH=608 83 5e-16
AT5G01660.1 | chr5:244504-248442 REVERSE LENGTH=657 73 5e-13
AT5G42050.1 | chr5:16815630-16816932 FORWARD LENGTH=350 72 1e-12
AT3G27090.1 | chr3:9990020-9991407 FORWARD LENGTH=297 59 6e-09
>AT5G61910.1 | chr5:24861091-24863729 REVERSE LENGTH=739
Length = 738
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 103/180 (57%), Gaps = 5/180 (2%)
Query: 227 GYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNGG 286
GYIFMCNG TK +CYR+RV G+P G DVV I+ G LFLYDF+ + LYG Y A G
Sbjct: 63 GYIFMCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGVYEATVGGR 122
Query: 287 LTLVPDAFRGRFPAQVKFTVDGDFMPIPESSLRTAIKENYSNGKFSPELTLVQVEKLRAL 346
L + P+AF G++PAQV F + + +P+ E++ ++AI ENY KF EL+ QV L +L
Sbjct: 123 LDIEPEAFEGKYPAQVGFRIVMNCLPLTENTFKSAIYENYKGSKFKQELSPHQVMSLLSL 182
Query: 347 FRPIIVMPESALFHNDSDRHPVPPAVYLPPASHPSQPAAYVHQQHQTSYIPPLTAHPMPP 406
FR L H + R P + S + A H ++ +S + PL+A + P
Sbjct: 183 FRSFTSPELDLLPHRLASRASAPRTL-----SFEERFIAATHLRNASSVLDPLSARHVEP 237
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 83/142 (58%)
Query: 47 GYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDGG 106
GYIFMC+G TK +CY V G PRG V I+ G LFLYDF+ R L+G Y A G
Sbjct: 63 GYIFMCNGRTKTDCYRYRVFGIPRGGKDVVESIKPGMKLFLYDFEKRLLYGVYEATVGGR 122
Query: 107 LDLAPAAFGGRFPAQVKFTIDGDFMPIPESSLRSAIKENYSNGKFSSELTLAQVENLRTL 166
LD+ P AF G++PAQV F I + +P+ E++ +SAI ENY KF EL+ QV +L +L
Sbjct: 123 LDIEPEAFEGKYPAQVGFRIVMNCLPLTENTFKSAIYENYKGSKFKQELSPHQVMSLLSL 182
Query: 167 FRPIIVQPEPGLPNNFDDRQPA 188
FR LP+ R A
Sbjct: 183 FRSFTSPELDLLPHRLASRASA 204
>AT2G32910.1 | chr2:13959685-13961989 FORWARD LENGTH=692
Length = 691
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 226 AGYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNG 285
G IFMCN T+ +C+R VMG+ D V I+ G LFLYD+D K LYG + A S G
Sbjct: 320 GGLIFMCNTKTRPDCFRFSVMGVQEKRKDFVKGIKPGLKLFLYDYDLKLLYGIFEASSAG 379
Query: 286 GLTLVPDAFRGRFPAQVKFTVDGDFMPIPESSLRTAIKENYSN-GKFSPELTLVQVEKLR 344
G+ L +AF G FPAQV+F V D +P+ ES + AI ENY+N KF ELT QV KL+
Sbjct: 380 GMKLERNAFGGSFPAQVRFKVFSDCIPLAESQFKKAIIENYNNKNKFKTELTHKQVFKLK 439
Query: 345 ALFRPIIV 352
LFRP +
Sbjct: 440 KLFRPAAI 447
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
Query: 46 AGYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDG 105
G IFMC+ T+P+C+ VMG R V I+ G LFLYD+D + L+G + A+S G
Sbjct: 320 GGLIFMCNTKTRPDCFRFSVMGVQEKRKDFVKGIKPGLKLFLYDYDLKLLYGIFEASSAG 379
Query: 106 GLDLAPAAFGGRFPAQVKFTIDGDFMPIPESSLRSAIKENYSN-GKFSSELTLAQVENLR 164
G+ L AFGG FPAQV+F + D +P+ ES + AI ENY+N KF +ELT QV L+
Sbjct: 380 GMKLERNAFGGSFPAQVRFKVFSDCIPLAESQFKKAIIENYNNKNKFKTELTHKQVFKLK 439
Query: 165 TLFRPIIV 172
LFRP +
Sbjct: 440 KLFRPAAI 447
>AT2G35140.1 | chr2:14813990-14816808 FORWARD LENGTH=880
Length = 879
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 76/125 (60%), Gaps = 4/125 (3%)
Query: 47 GYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDGG 106
G IFM + +T+ EC +R + G P G V ++ G LFL++F+ R LHG ++A SDG
Sbjct: 23 GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82
Query: 107 LDLAPAAF---GGRFPAQVKFTIDGDFMPIPESSLRSAIKENY-SNGKFSSELTLAQVEN 162
+++ P AF G +FPAQVKFT P+ ES +AI ENY + KF+ L+ AQV+
Sbjct: 83 INIEPNAFRSSGKQFPAQVKFTEKWRCRPLCESEFGNAIHENYFTPTKFNFGLSKAQVQR 142
Query: 163 LRTLF 167
L LF
Sbjct: 143 LLKLF 147
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 227 GYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNGG 286
G IFM N T+ EC ++ GLP+G V ++ G LFL++F+ + L+G + A S+G
Sbjct: 23 GAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLFEFEKRELHGVFQACSDGA 82
Query: 287 LTLVPDAFRG---RFPAQVKFTVDGDFMPIPESSLRTAIKENY-SNGKFSPELTLVQVEK 342
+ + P+AFR +FPAQVKFT P+ ES AI ENY + KF+ L+ QV++
Sbjct: 83 INIEPNAFRSSGKQFPAQVKFTEKWRCRPLCESEFGNAIHENYFTPTKFNFGLSKAQVQR 142
Query: 343 LRALF 347
L LF
Sbjct: 143 LLKLF 147
>AT3G11000.2 | chr3:3447847-3450283 FORWARD LENGTH=608
Length = 607
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 46 AGYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDG 105
G IF C +T ECYA+ + G P + + I G LFL+++ R LHG + AAS+G
Sbjct: 131 CGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDRTLHGIFEAASEG 190
Query: 106 GLDLAPAAFGGR------FPAQVKFTIDGDFMPIPESSLRSAIKENYSNGK-FSSELTLA 158
L++ A+ +PAQVK + P+PE I ENY++ K F EL
Sbjct: 191 KLNIDSKAWSPNGTDPSPYPAQVKVRVRVRCEPLPEEKFSPVIVENYNDDKMFWFELDRG 250
Query: 159 QVENLRTLFRP 169
Q L LF+P
Sbjct: 251 QTNKLLRLFKP 261
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 214 NGCXXXXXXXXPAGYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAK 273
N C G IF C T ECY + GLP + + I G LFL+++ +
Sbjct: 119 NMCVRNLKKGDLCGVIFGCKFSTIKECYAKNLFGLPAPHMAYIKNIDPGLTLFLFNYSDR 178
Query: 274 HLYGPYHADSNGGLTLVPDAFRGR------FPAQVKFTVDGDFMPIPESSLRTAIKENYS 327
L+G + A S G L + A+ +PAQVK V P+PE I ENY+
Sbjct: 179 TLHGIFEAASEGKLNIDSKAWSPNGTDPSPYPAQVKVRVRVRCEPLPEEKFSPVIVENYN 238
Query: 328 NGK-FSPELTLVQVEKLRALFRP 349
+ K F EL Q KL LF+P
Sbjct: 239 DDKMFWFELDRGQTNKLLRLFKP 261
>AT5G01660.1 | chr5:244504-248442 REVERSE LENGTH=657
Length = 656
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 46 AGYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDG 105
G +F C+ T EC ++ + G P P V +I G LFL+++ R LHG + AA G
Sbjct: 19 GGVVFGCTKNTIKECMSKQLFGLPSNHYPYVQKIDIGLPLFLFNYSDRTLHGIFEAAGCG 78
Query: 106 GLDLAPAAFGG------RFPAQVKFTIDGDFMPIPESSLRSAIKEN-YSNGKFSSELTLA 158
L+ P + +PAQV ++ P+ E + AI +N YS+ F EL
Sbjct: 79 QLNFDPYGWTSDGSERTSYPAQVPISVRLQCEPLSEEKFKPAIADNYYSSHHFWFELDHF 138
Query: 159 QVENLRTLFRPIIVQPEPGLPNNFDDRQPARPCSMS 194
Q L L V+P+P + N + RQ R S S
Sbjct: 139 QTRKLTCLLTSFAVKPKPPM-NTPNTRQIFRLISSS 173
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 7/137 (5%)
Query: 226 AGYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNG 285
G +F C T EC ++ GLP V +I G LFL+++ + L+G + A G
Sbjct: 19 GGVVFGCTKNTIKECMSKQLFGLPSNHYPYVQKIDIGLPLFLFNYSDRTLHGIFEAAGCG 78
Query: 286 GLTLVPDAF------RGRFPAQVKFTVDGDFMPIPESSLRTAIKEN-YSNGKFSPELTLV 338
L P + R +PAQV +V P+ E + AI +N YS+ F EL
Sbjct: 79 QLNFDPYGWTSDGSERTSYPAQVPISVRLQCEPLSEEKFKPAIADNYYSSHHFWFELDHF 138
Query: 339 QVEKLRALFRPIIVMPE 355
Q KL L V P+
Sbjct: 139 QTRKLTCLLTSFAVKPK 155
>AT5G42050.1 | chr5:16815630-16816932 FORWARD LENGTH=350
Length = 349
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 46 AGYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDG 105
GYIF+C+ T E R + G P +V I G LFLY++ + LHG Y AAS G
Sbjct: 217 GGYIFVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEAASFG 276
Query: 106 GLDLAPAAF-------GGRFPAQVKFTIDGDFMPIPESSLRSAIKENYSNGKFSSELTLA 158
G ++ AF RFPAQV+ +P+ E S R I +Y KF EL++
Sbjct: 277 GTNIELNAFEDKKCPGESRFPAQVRAITRKVCLPLEEDSFR-PILHHYDGPKFRLELSVP 335
Query: 159 QVENLRTLF 167
+V +L +F
Sbjct: 336 EVLSLLDIF 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 226 AGYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNG 285
GYIF+CN T E + ++ GLP D V I G LFLY++ L+G Y A S G
Sbjct: 217 GGYIFVCNNDTMEENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIYEAASFG 276
Query: 286 GLTLVPDAF-------RGRFPAQVKFTVDGDFMPIPESSLRTAIKENYSNGKFSPELTLV 338
G + +AF RFPAQV+ +P+ E S R I +Y KF EL++
Sbjct: 277 GTNIELNAFEDKKCPGESRFPAQVRAITRKVCLPLEEDSFR-PILHHYDGPKFRLELSVP 335
Query: 339 QVEKLRALF 347
+V L +F
Sbjct: 336 EVLSLLDIF 344
>AT3G27090.1 | chr3:9990020-9991407 FORWARD LENGTH=297
Length = 296
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 46 AGYIFMCSGATKPECYARGVMGQPRGRLPAVSRIRRGAALFLYDFDSRHLHGPYRAASDG 105
GYIF+C+ T E R + G P +V I G LFLY++ + LHG + A + G
Sbjct: 163 GGYIFVCNNDTMQEDMKRHLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEATTFG 222
Query: 106 GLDLAPAAF-------GGRFPAQVKFTIDGDFMPIPESSLRSAIKENYSNGKFSSELTLA 158
G ++ A+ RFPAQV+ + + E S R + +Y KF EL++
Sbjct: 223 GTNIDATAWEDKKCKGESRFPAQVRIRVRKICKALEEDSFRPVL-HHYDGPKFRLELSVP 281
Query: 159 QVENLRTL 166
+ +L L
Sbjct: 282 ETLDLLDL 289
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 226 AGYIFMCNGVTKAECYRHRVMGLPLGSLDVVSRIRRGTALFLYDFDAKHLYGPYHADSNG 285
GYIF+CN T E + + GLP D V I G LFLY++ L+G + A + G
Sbjct: 163 GGYIFVCNNDTMQEDMKRHLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEATTFG 222
Query: 286 GLTLVPDAF-------RGRFPAQVKFTVDGDFMPIPESSLRTAIKENYSNGKFSPELTL 337
G + A+ RFPAQV+ V + E S R + +Y KF EL++
Sbjct: 223 GTNIDATAWEDKKCKGESRFPAQVRIRVRKICKALEEDSFRPVL-HHYDGPKFRLELSV 280
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.133 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,165,680
Number of extensions: 574391
Number of successful extensions: 2711
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 2800
Number of HSP's successfully gapped: 14
Length of query: 644
Length of database: 11,106,569
Length adjustment: 105
Effective length of query: 539
Effective length of database: 8,227,889
Effective search space: 4434832171
Effective search space used: 4434832171
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 115 (48.9 bits)