BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0514000 Os11g0514000|Os11g0514000
(1757 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48770.1 | chr3:18079261-18086817 REVERSE LENGTH=1900 1496 0.0
AT3G28020.1 | chr3:10417906-10419149 REVERSE LENGTH=247 176 7e-44
AT4G13750.1 | chr4:7975191-7987558 FORWARD LENGTH=2730 120 6e-27
>AT3G48770.1 | chr3:18079261-18086817 REVERSE LENGTH=1900
Length = 1899
Score = 1496 bits (3872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 794/1674 (47%), Positives = 1088/1674 (64%), Gaps = 51/1674 (3%)
Query: 62 VPNAEDNEYPSGVAPSLDFLVTSNDITGSGASATLLIFNNEKGFSPANIESIIRVGKSTK 121
+ NAEDNEYP GV PSL+F++TS DIT +GA ATLLIFNNEKGFS NIESI VG+STK
Sbjct: 244 IQNAEDNEYPEGVDPSLEFVITSEDITNTGAPATLLIFNNEKGFSEKNIESICSVGRSTK 303
Query: 122 KGNRDKGYIGEKGIGFKSVFLISSQPHIFSNGYQIKFNGKPCAECGIGYIVPEWVESRPS 181
KGNR GYIGEKGIGFKSVFLI+SQP+IFSNGYQI+FN PC+ C +GYIVPEWV+ PS
Sbjct: 304 KGNRKCGYIGEKGIGFKSVFLITSQPYIFSNGYQIRFNEAPCSHCSLGYIVPEWVDQHPS 363
Query: 182 LSDIRTIYGSSKVLPTTTIILPLKSEKVDAVKKQLSSMHPEMLLFLSKIRQLSVKEENVN 241
L DI+ +YGS LPTTTIILPLKS+KV VK+QLS++HPE+LLFLSKI++LS++E ++
Sbjct: 364 LVDIQRMYGSGSALPTTTIILPLKSDKVKPVKEQLSNVHPEVLLFLSKIKRLSIREHCLD 423
Query: 242 HKCSPVSEISISSEKNFQERKNMHAESYTLHLSALENGKG-EEECGYYMWRQKFPVKPEN 300
K S V+ I I SE NF RK++ AESYT+HLSA E GK E+EC YYMWRQKFPVK EN
Sbjct: 424 PKLSTVNSIGIVSETNFVTRKSIDAESYTIHLSASEKGKNSEQECSYYMWRQKFPVKHEN 483
Query: 301 RVDKRAEIDEWVITLAFPYGQRLSRGKQMSPGVYAFLPTEMVTNFPFIIQADFLLASSRE 360
RVD+R+E++EWVITLAFP+G+RL G SPG+YAFLPTEMVTNFPFIIQADF+LASSRE
Sbjct: 484 RVDRRSEVEEWVITLAFPFGERLGHGNN-SPGIYAFLPTEMVTNFPFIIQADFILASSRE 542
Query: 361 AILFDSPWNKGILECVPSAFLNAFVALVKSGADVPAMSLPSMFNFLPVGSSLIPLLEPVR 420
IL D WN+GIL CVP AFLNAF +LVK+ D P SL F FLPV S L VR
Sbjct: 543 MILLDDIWNQGILNCVPLAFLNAFTSLVKT-TDAPVSSLLPAFRFLPVKESNYAKLNVVR 601
Query: 421 SGIKDKVLAEDIVPCESYTPQKIFCKPAVVGRLKPDFWDILSKAQKSGVDLKNLSTHGTY 480
I+ +V AE+IVP S+ QK F KP VGRL P FWDIL KA G L+N+S+HG Y
Sbjct: 602 ESIRARVCAEEIVPSISHQGQKFFYKPCEVGRLIPTFWDILEKAGSEGASLQNISSHGIY 661
Query: 481 ILSSHFDKSAYNSVLEFLGIKSVNPEWYAKCIEGSNLVKEVPEQLYLEIISFVADNWQIC 540
IL+S FD++ Y++VL FLG+K V+ EWY KCI+G +LV V E Y+E++ F+A+NWQ
Sbjct: 662 ILNSAFDRTEYDNVLNFLGLKQVSNEWYVKCIQGCDLVTSVSEATYVEVLLFIAENWQCR 721
Query: 541 FSGTNMSSIPLLKYVNRHDVLSFWSLSTASQHCDRLCIASEKYISWLISWNKEFPSSSR- 599
F TNM +PL+KYV + V S SL S LC+++EK +WL+ WN EF S
Sbjct: 722 FQNTNMGKVPLIKYVVQKGVSSLSSLGGFSPRT--LCLSTEKNQAWLLDWNDEFRCMSNF 779
Query: 600 LFLPPNTQGALNDFSQKTKVTNWLQNYAKVDFVSVYSYAQLIVNSLGSDRRSVIAFAHFL 659
+F+PP T+ AL S+K + WL+ KV +SV YA+ + +L D+R V+A+AHFL
Sbjct: 780 VFMPPTTRTALKVCSKKEIIHTWLKENVKVITLSVSDYAKHLRENLNGDKRLVVAYAHFL 839
Query: 660 YHSTQKKYIESYYLPDLLRAMPVIDNYGSAITARKGILVPAKGSKWVGLMGSNPWRNEKY 719
+HS K ++ + MP++DNYG+ +R G+LVPA KWV L+GSNPWR+ Y
Sbjct: 840 HHSISKDFLSKEEAGKCCKDMPLVDNYGNVNISRNGVLVPASAGKWVSLVGSNPWRHSGY 899
Query: 720 VELSSDYKSANYFAGQCTSEDQLMAFLKTQLQASDVPFINPPDASFPTVSSPLTMDNAIL 779
+ELS +Y +N FAG +++ L+ FLK+ ++A D+P I PP+ + P +S PLT +N +L
Sbjct: 900 IELSEEYLLSNRFAGLRSNKKDLLGFLKSSVEAGDIPDIEPPNVAIPALSGPLTKENVLL 959
Query: 780 LLEWIRNLNSKGSQLPARFLACIKQGSWLKTSVG----YKPPNESFLSGAEWGSLLQTGS 835
LLEWI N L + FL ++ GSWL+T++ Y+PP++SF + WGS+LQ GS
Sbjct: 960 LLEWINKCNRHS--LRSNFLNSVRGGSWLRTTMNGVSDYRPPSQSFYHTSSWGSILQNGS 1017
Query: 836 SFVDIPMIDQQFYGNKLQEYKKELQAIGVRFEFREASAYIGDRLMSMAENNMLTRENVYS 895
VDIP++D+ +YGN++++YK+EL+ GV FEF E ++G+ LMS+AE + + NV+S
Sbjct: 1018 ILVDIPLVDRSYYGNEIEKYKEELKIAGVMFEFSEVCRFVGNHLMSLAETSTQSSANVFS 1077
Query: 896 LLRLIRFMREKVLSPSELINSVKNGKWMKTDIGYRSPADCIIKDSGWEVASCISDQPFLD 955
+L+ IR++REK LSP++ I +VKNG W+KT GYRSP ++ W+ AS ISD PF+D
Sbjct: 1078 ILKFIRYLREKRLSPADFITAVKNGPWLKTISGYRSPDGAVLFSEEWKAASLISDIPFID 1137
Query: 956 VKFYGEAILS-YKQELELLGVVAGFKDNYNLVINNFKFSS-TAITPEATILILKCIRHV- 1012
FYG L+ YK+ELELLGVV F DNY+L++++ + T +TP+A L+L C+R +
Sbjct: 1138 RGFYGVVSLNGYKEELELLGVVVKFPDNYSLIVSHLNTAKLTYLTPDAMFLVLDCMRQLS 1197
Query: 1013 --RSCDDFVNKLRGLKWVRTNMGFCAPNKSFFVDPEWECLIKVFDGIPVIDFGFYGSKIS 1070
R + N + K + G+ +P + F DPEW CL+ VFD P+ID FYGS+I
Sbjct: 1198 PHRLINALWNSSQCFKTKKN--GYKSPAECFIPDPEWTCLLSVFDCFPLIDDDFYGSRIF 1255
Query: 1071 SYKEELKKTGLITRFEEASKAIADIFKQMVSKSALTKANILALLASYRQLR-THSPMPVE 1129
+YK ELK+ G+ + EEA K FKQ S LT+ +LL+ Y++L + P E
Sbjct: 1256 AYKGELKQIGVKLQLEEAVKMFVSTFKQKAISSGLTRCTASSLLSCYKKLMGSLYKYPEE 1315
Query: 1130 LFNCMRTEKWLSTSIGS-KAPKDAILFNEEWQSLSPIANLPFIDGSDSQHGLGKEIHGYK 1188
L + +WL T +G +APKD ILF+ EW+ L IANLPFID D + GK IH ++
Sbjct: 1316 LMKSFKQFQWLHTKLGDFRAPKDCILFDSEWEPLRLIANLPFID--DGPNWYGKSIHEFR 1373
Query: 1189 DVLKELGAIVEVKFGSRFVITGLNIPNDP--LSKATVLALLKCIRIYLAST-AALPKGFC 1245
L+ LG VE++ G VI+ L++P DP ++ ++ L+L +CI+ LPK
Sbjct: 1374 KELESLGVTVELRKGMSHVISSLSLP-DPSRIAPSSALSLFRCIKFLREDRFQQLPKELL 1432
Query: 1246 ENIASKEWLKTTIGYRCPDECILFDPKCTCICKEDGPFIDEAFYGSEISSFKDVLMKIGV 1305
+ ++ K WLKT GYR P+EC+LFD + + DGPFIDE +YGS+I+SF++ L+ IGV
Sbjct: 1433 DKVSVK-WLKTHAGYRSPEECLLFD-RTWKLEPCDGPFIDEEYYGSDINSFREELIAIGV 1490
Query: 1306 IVDIKRGHDLVARHLRNHKDSATISRIYLYLKDCNWEPEN-KTSNWVWLPNGSGSGEWVS 1364
D + L+AR++ ++ ISR+Y +L + W+PE +S +W+P+ +W
Sbjct: 1491 GHDSDKACQLLARNVYKLSETDAISRVYRFLSEAEWKPEKGASSGRIWIPSDE---KWAD 1547
Query: 1365 APSCVLHDRDNLFTSHLHVXXXXXXXXXXXX----FSVFLGVRHGPSSEDYCKLWSTWES 1420
SCVL D+D LF S +V FS GVR PS EDYC+LW WE
Sbjct: 1548 ISSCVLFDKDKLFGSKFNVLENHYCSGKDHNLLGFFSSAFGVRINPSIEDYCELWKYWEK 1607
Query: 1421 SVSELSKADCSAFWKFVATNWGQ-NMNKLLSGC-----IKVPVCTDGK-IILSSKKDVFI 1473
+ + LS +C AFW FV + KLLS + P C + ++LSS DVFI
Sbjct: 1608 TKNRLSSHECCAFWSFVVRHGDTVKAEKLLSESFSRLPVHSPDCNNNDGVMLSSISDVFI 1667
Query: 1474 PXXXXXXXXXXXXXQQAVFIWYPSSSLPSMSRARLNNIYSSIGVGTISKAARKNDSFTLG 1533
VF+WYP+ S+P++SR RL IY +IGV +SK ++ G
Sbjct: 1668 ---ADDLLLKDMFIDSPVFVWYPTPSIPTLSRTRLIEIYRNIGVKEVSKCVEIAEADLTG 1724
Query: 1534 -SGSLKTV--GLNMVIKAGLLQLVLAFLADPALDISTKERHKMVSWLLNVTVLETDEPIT 1590
L+ V +I GL++L+LAFL+DP+L + T ER +++ L+++ V ET E IT
Sbjct: 1725 FKTELQEVVDPKKNLIGPGLVKLILAFLSDPSLKVETAERLRIIHSLVDIDVKETSETIT 1784
Query: 1591 VAYSVSL-SSGRALDVKASRMLRWERDNFKLYMQRSHDAAGYKEKIEFATYFSEEISGGL 1649
Y++SL S G L KA RM+RWER+ +Y ++ G ++ +E+AT F+E I+ G+
Sbjct: 1785 TEYTLSLPSKGEKLIAKAKRMIRWEREKGVVYAEKMEKTCGKRKLLEYATCFAEVIAKGV 1844
Query: 1650 LFEMADQIPSLAELVKVGSLLDFQDAAVDFLLKSKNLQLFPEDEAFLKASLQDI 1703
++E D I L+ELVK+ L++F + A++FL+KSKNLQ++ EDE + +
Sbjct: 1845 MWEREDLIGRLSELVKMAYLVEFDEEALEFLMKSKNLQVYEEDEKLISDEFSQV 1898
>AT3G28020.1 | chr3:10417906-10419149 REVERSE LENGTH=247
Length = 246
Score = 176 bits (447), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/269 (42%), Positives = 139/269 (51%), Gaps = 62/269 (23%)
Query: 166 CGIGYIVPEWVESRPSLSDIRTIYGSSKVLPTTTIILPLKSEKVDAVKKQLSSMHPEMLL 225
C +GYIVPEWVE RPSL DI+ I G +PTTTII+PLKS+KV VK+QLS++HPE+
Sbjct: 37 CNLGYIVPEWVEKRPSLVDIQKINGFGSAIPTTTIIMPLKSDKVKPVKEQLSNVHPEI-- 94
Query: 226 FLSKIRQLSVKEENVNHKCSPVSEISISSEKNFQERKNMHAESYTLHLSALENGKGEEEC 285
+ K S V+ I SE N RK++ AES
Sbjct: 95 -------------HYQDKVSIVNSHGIVSETNLVSRKSIDAES----------------- 124
Query: 286 GYYMWRQKFPVKPENRVDKRAEIDEWVITLAFPYGQRLSRGKQMSPGVYAFLPTEMVTNF 345
QK VK ENRV +R E++E + TL F G RL+ G P +YAFLPTEM
Sbjct: 125 ------QKLTVKNENRVGRRGEVEELLTTLVFLLGDRLALGDSFPPSIYAFLPTEME--- 175
Query: 346 PFIIQADFLLASSREAILFDSPWNKGILECVPSAFLNAFVALVKSGADVPAMSLPSMFNF 405
+L+ R D WN+GIL CVPSAF+NAF +LVK F+F
Sbjct: 176 --------ILSLHR----LDDMWNQGILSCVPSAFVNAFTSLVKKT---------DAFSF 214
Query: 406 LPVGSSLIPLLEPVRSGIKDKVLAEDIVP 434
LPV S L VR I +VLAE VP
Sbjct: 215 LPVKVSNYEELNDVRESIMARVLAEGNVP 243
>AT4G13750.1 | chr4:7975191-7987558 FORWARD LENGTH=2730
Length = 2729
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 173/376 (46%), Gaps = 67/376 (17%)
Query: 62 VPNAEDNEYPSGVAPSLDFLVTSNDITGSGASATLLIFNNEKGFSPANIESIIRVGKSTK 121
V NA+DN+YP V P+L F++ I ++ NNE GF P NI ++ VG+STK
Sbjct: 1214 VQNADDNKYPEHVEPTLTFILQKTGI---------VVLNNECGFMPENIRALCDVGQSTK 1264
Query: 122 KGNRDKGYIGEKGIGFKSVFLISSQPHIFSNGYQIKFNGKPCAECGIGYIVPEWV----- 176
KG+ KGIGFKSVF +S P I SNG+ KF+ +E IGYI+P V
Sbjct: 1265 KGSGGYIGK--KGIGFKSVFRVSDAPEIHSNGFHFKFD---ISEGQIGYILPTVVPPHDI 1319
Query: 177 ESRPSLSDIRTIYGSSKVLPTTTIILPLK---SEK--VDAVKKQLSSMHPEMLLFLSKIR 231
ES S+ R ++ T I LP + SE+ V+ ++ S +HP +LLFL +++
Sbjct: 1320 ESLSSMLSGRALHLKDAGW-NTCITLPFRAIDSERTTVNHIEPMFSDLHPSLLLFLHRLQ 1378
Query: 232 QLSVKEENVNHKCSPVSEISISSEKNFQERKNMHAESYTLHLSALENGKGEEECGYYMWR 291
+ + NV V + S KN+ ++ GE +++
Sbjct: 1379 CIVYR--NVLDDSLLVMRKEVVS-------KNI-----------VKVSCGENSMTWFVAS 1418
Query: 292 QKFPVKPENRVDKRAEIDEWVITLAFPYG---QRLSRGKQMSPGVYAFLPTEMVTNFPFI 348
+K + R ++ I++ F R + V+AFLP FI
Sbjct: 1419 EKLKA-----TNLRDDVQTTEISIGFTLDMLEDGTYRSCMIQEPVFAFLPLR-TYGLKFI 1472
Query: 349 IQADFLLASSREAILFDSPWNKGILECVPSAFLNAFVALVKSGADVPAMSLPSMFNFLPV 408
IQ DF+L SSRE + DSPWN+ +L P F++A + SLPS L
Sbjct: 1473 IQGDFILTSSREDVDEDSPWNQWLLSEFPGLFVDALRSFC---------SLPSFTQNLGK 1523
Query: 409 GSS----LIPLLEPVR 420
G S L+PL+ V
Sbjct: 1524 GVSSYMQLVPLVGEVH 1539
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 38,367,825
Number of extensions: 1663047
Number of successful extensions: 3968
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 3907
Number of HSP's successfully gapped: 3
Length of query: 1757
Length of database: 11,106,569
Length adjustment: 113
Effective length of query: 1644
Effective length of database: 8,008,561
Effective search space: 13166074284
Effective search space used: 13166074284
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 119 (50.4 bits)