BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0498600 Os11g0498600|AK071051
(152 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50720.1 | chr5:20633442-20634502 REVERSE LENGTH=117 167 2e-42
AT4G24960.1 | chr4:12828060-12828982 FORWARD LENGTH=136 164 2e-41
AT2G42820.1 | chr2:17817460-17818301 REVERSE LENGTH=159 115 1e-26
AT1G74520.1 | chr1:28008109-28009156 REVERSE LENGTH=178 110 4e-25
AT1G69700.1 | chr1:26220337-26221663 FORWARD LENGTH=185 94 3e-20
AT5G62490.1 | chr5:25090206-25091345 FORWARD LENGTH=168 94 3e-20
AT4G36720.1 | chr4:17307769-17309668 FORWARD LENGTH=201 68 2e-12
AT5G42560.1 | chr5:17015573-17016969 FORWARD LENGTH=297 56 7e-09
AT1G19950.1 | chr1:6925043-6926527 FORWARD LENGTH=316 56 8e-09
AT1G75700.1 | chr1:28423956-28424931 FORWARD LENGTH=178 55 1e-08
AT2G36020.1 | chr2:15123424-15125140 REVERSE LENGTH=259 47 3e-06
>AT5G50720.1 | chr5:20633442-20634502 REVERSE LENGTH=117
Length = 116
Score = 167 bits (422), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/106 (73%), Positives = 93/106 (87%)
Query: 1 MGKLWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLL 60
M KLWT L+ +HSLAGP VMLLYPLYASV A+ESPSK+DDEQWLAYWILYSF+TL E++L
Sbjct: 1 MTKLWTSLSALHSLAGPVVMLLYPLYASVIAIESPSKVDDEQWLAYWILYSFLTLSELIL 60
Query: 61 ESLIYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQLRKHGL 106
+SL+ WIPIWY KL+F+AWL LP FRGAAFIYN+ VREQ +K+G+
Sbjct: 61 QSLLEWIPIWYTAKLVFVAWLVLPQFRGAAFIYNKVVREQFKKYGI 106
>AT4G24960.1 | chr4:12828060-12828982 FORWARD LENGTH=136
Length = 135
Score = 164 bits (415), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 76/106 (71%), Positives = 91/106 (85%)
Query: 1 MGKLWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLL 60
M K WT LT +HS AGP VMLLYPLYASV AMES +K+DDEQWLAYWI+YSF++L E++L
Sbjct: 1 MDKFWTFLTALHSGAGPIVMLLYPLYASVIAMESTTKVDDEQWLAYWIIYSFLSLTELIL 60
Query: 61 ESLIYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQLRKHGL 106
+SLI WIPIWY +KL+F+AWL LP F+GAAFIYNR VREQ +KHG+
Sbjct: 61 QSLIEWIPIWYTVKLVFVAWLVLPQFQGAAFIYNRVVREQFKKHGV 106
>AT2G42820.1 | chr2:17817460-17818301 REVERSE LENGTH=159
Length = 158
Score = 115 bits (287), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 73/102 (71%)
Query: 1 MGKLWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLL 60
MG + I +L GP VMLLYPLYAS +A+ESP+ LDD+QWL YWI+YS IT+ E+ +
Sbjct: 1 MGFIIAIAKRFDALVGPGVMLLYPLYASFRAIESPTMLDDQQWLTYWIIYSLITIFELSV 60
Query: 61 ESLIYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQLR 102
++ W+P W LKLLF WL LP F GAA+IY+ FVR+ ++
Sbjct: 61 WRVLAWLPFWPYLKLLFCMWLVLPMFSGAAYIYSNFVRQYVK 102
>AT1G74520.1 | chr1:28008109-28009156 REVERSE LENGTH=178
Length = 177
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 67/95 (70%)
Query: 4 LWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESL 63
L +L + LAGP V L+YPLYASVQA+E+ S DD+QWL YW+LYS +TL+E+ L
Sbjct: 9 LKVLLRNFDVLAGPVVSLVYPLYASVQAIETQSHADDKQWLTYWVLYSLLTLIELTFAKL 68
Query: 64 IYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVR 98
I W+PIW +KL+ WL +P F GAA++Y FVR
Sbjct: 69 IEWLPIWSYMKLILTCWLVIPYFSGAAYVYEHFVR 103
>AT1G69700.1 | chr1:26220337-26221663 FORWARD LENGTH=185
Length = 184
Score = 94.0 bits (232), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 4 LWTILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESL 63
L ++ + LA P V L+YPLYASV+A+E+ S +DEQWL YW+LY+ I+L E+
Sbjct: 11 LQVLIKNFDVLALPLVTLVYPLYASVKAIETRSLPEDEQWLTYWVLYALISLFELTFSKP 70
Query: 64 IYWIPIWYELKLLFIAWLALPNFRGAAFIYNRFVR 98
+ W PIW +KL I WL LP F GA IY F+R
Sbjct: 71 LEWFPIWPYMKLFGICWLVLPQFNGAEHIYKHFIR 105
>AT5G62490.1 | chr5:25090206-25091345 FORWARD LENGTH=168
Length = 167
Score = 93.6 bits (231), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%)
Query: 7 ILTHVHSLAGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESLIYW 66
I + +AGP + L+YPLYASV+A+ES S DD+QWL YW LYS I L E+ L+ W
Sbjct: 12 IFKNFDVIAGPVISLVYPLYASVRAIESRSHGDDKQWLTYWALYSLIKLFELTFFRLLEW 71
Query: 67 IPIWYELKLLFIAWLALPNFRGAAFIYNRFVREQL 101
IP++ KL +WL LP GAA++Y +VR L
Sbjct: 72 IPLYPYAKLALTSWLVLPGMNGAAYLYEHYVRSFL 106
>AT4G36720.1 | chr4:17307769-17309668 FORWARD LENGTH=201
Length = 200
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%)
Query: 15 AGPTVMLLYPLYASVQAMESPSKLDDEQWLAYWILYSFITLVEMLLESLIYWIPIWYELK 74
A ++ + P+Y++ +A+ES + + ++ L YW Y +LVE+ + +I W P++Y +K
Sbjct: 40 ACCSIGIGLPVYSTFKAIESGDENEQQKMLIYWAAYGSFSLVEVFTDKIISWFPLYYHVK 99
Query: 75 LLFIAWLALPNFRGAAFIYNRFVREQLRKH 104
F+ WL LP G+ IYN +R L +H
Sbjct: 100 FAFLVWLQLPTVEGSKQIYNNQIRPFLLRH 129
>AT5G42560.1 | chr5:17015573-17016969 FORWARD LENGTH=297
Length = 296
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 19 VMLL---YPLYASVQAMESPSKLDDEQ---WLAYWILYSFITLVEMLLESLIYWIPIWYE 72
VM+L YP Y + +E ++ + EQ W YWIL + +T+ E + ++ + W+P++ E
Sbjct: 11 VMVLGYAYPAYECYKTVEK-NRPEIEQLRFWCQYWILVACLTVFERVGDAFVSWVPMYSE 69
Query: 73 LKLLFIAWLALPNFRGAAFIYNRFVREQLRKH 104
KL F +L P RG ++Y F R L +H
Sbjct: 70 AKLAFFIYLWYPKTRGTTYVYESFFRPYLSQH 101
>AT1G19950.1 | chr1:6925043-6926527 FORWARD LENGTH=316
Length = 315
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 23 YPLYASVQAMESPSKLDDEQ---WLAYWILYSFITLVEMLLESLIYWIPIWYELKLLFIA 79
YP Y +A+E +K + +Q W YWIL + +T+ E + ++L W+P++ E KL F
Sbjct: 18 YPAYECYKAVEK-NKPEMQQLRFWCQYWILVAALTIFERVGDALASWVPLYCEAKLAFFI 76
Query: 80 WLALPNFRGAAFIYNRFVREQLRKH 104
+L P RG ++Y+ F + + KH
Sbjct: 77 YLWFPKTRGTTYVYDSFFQPYVAKH 101
>AT1G75700.1 | chr1:28423956-28424931 FORWARD LENGTH=178
Length = 177
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 23 YPLYASVQAME--SPSKLDDEQWLAYWILYSFITLVEMLLESLIYWIPIWYELKLLFIAW 80
YP Y + +E P + W YWI+ + +T+ E + ++L+ W+P++ E KL F +
Sbjct: 18 YPAYECFKTVELNKPEIQQLQFWCQYWIIVAALTIFERIGDALVSWLPMYSEAKLAFFIY 77
Query: 81 LALPNFRGAAFIYNRFVREQLRKH 104
L P +G ++Y+ F R + KH
Sbjct: 78 LWFPKTKGTTYVYDSFFRPYIAKH 101
>AT2G36020.1 | chr2:15123424-15125140 REVERSE LENGTH=259
Length = 258
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 23 YPLYASVQAMESPSKLDDEQ---WLAYWILYSFITLVEMLLESLIYWIPIWYELKLLFIA 79
YP + + +E +K+D E+ W YWIL + I+ E + + I W+P++ E+K++F
Sbjct: 18 YPAFECFKTVEK-NKVDIEELRFWCQYWILLALISSFERVGDFFISWLPLYGEMKVVFFV 76
Query: 80 WLALPNFRGAAFIYNRFVREQLRKH 104
+L P +G +Y ++ + +H
Sbjct: 77 YLWYPKTKGTRHVYETLLKPYMAQH 101
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.327 0.141 0.463
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,786,610
Number of extensions: 88560
Number of successful extensions: 244
Number of sequences better than 1.0e-05: 11
Number of HSP's gapped: 244
Number of HSP's successfully gapped: 11
Length of query: 152
Length of database: 11,106,569
Length adjustment: 90
Effective length of query: 62
Effective length of database: 8,639,129
Effective search space: 535625998
Effective search space used: 535625998
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 107 (45.8 bits)