BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0496500 Os11g0496500|AK062973
(69 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G63500.1 | chr5:25423460-25423669 FORWARD LENGTH=70 86 3e-18
AT3G48660.1 | chr3:18029659-18030133 FORWARD LENGTH=90 86 5e-18
AT5G08391.1 | chr5:2699357-2699566 FORWARD LENGTH=70 81 1e-16
AT3G27030.1 | chr3:9972508-9974225 REVERSE LENGTH=143 81 1e-16
AT5G40980.1 | chr5:16414877-16415086 REVERSE LENGTH=70 75 9e-15
AT3G27027.1 | chr3:9971921-9972130 FORWARD LENGTH=70 75 9e-15
AT3G01950.1 | chr3:324026-324238 FORWARD LENGTH=71 71 9e-14
AT5G14110.1 | chr5:4553964-4554176 REVERSE LENGTH=71 71 1e-13
AT5G40970.1 | chr5:16414081-16414290 FORWARD LENGTH=70 66 4e-12
AT3G01940.1 | chr3:322841-323053 REVERSE LENGTH=71 59 5e-10
AT5G50660.1 | chr5:20612575-20612778 FORWARD LENGTH=68 50 2e-07
AT5G50560.1 | chr5:20579233-20579436 FORWARD LENGTH=68 50 2e-07
AT5G40960.1 | chr5:16412745-16412951 REVERSE LENGTH=69 50 3e-07
>AT5G63500.1 | chr5:25423460-25423669 FORWARD LENGTH=70
Length = 69
Score = 86.3 bits (212), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXX 60
MADWGPV I ++LF++LSPGLLFQIP GR+VEFGN QTSG SILVH+
Sbjct: 1 MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60
Query: 61 XVNVHMYLG 69
+NVH+Y G
Sbjct: 61 AINVHIYSG 69
>AT3G48660.1 | chr3:18029659-18030133 FORWARD LENGTH=90
Length = 89
Score = 85.5 bits (210), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXX 60
MADWGPV + ++LF+LL+PGLLFQIP +GR+VEFGN QTSG SILVH+
Sbjct: 1 MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60
Query: 61 XVNVHMYLG 69
+ +H+Y G
Sbjct: 61 AIRLHIYTG 69
>AT5G08391.1 | chr5:2699357-2699566 FORWARD LENGTH=70
Length = 69
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 50/69 (72%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXX 60
M+DWGPV + ++LF++L+PGLLFQ+PG+ + VEFGNFQTS +S++VHS
Sbjct: 1 MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60
Query: 61 XVNVHMYLG 69
+ +H+Y+G
Sbjct: 61 ALKIHIYIG 69
>AT3G27030.1 | chr3:9972508-9974225 REVERSE LENGTH=143
Length = 142
Score = 80.9 bits (198), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXX 60
M DWGPVF+ + LF+LL+PGLL Q+PG+GR+VEFG FQTSGLS++VH+
Sbjct: 1 MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60
Query: 61 XVNVHM 66
+ +H+
Sbjct: 61 ALQIHI 66
Score = 72.0 bits (175), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXX 60
MADW PV +G+VLF++LSPGLLF +PG R V+FG +T+G +I VH+
Sbjct: 74 MADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTILIL 133
Query: 61 XVNVHMYLG 69
+N+H+Y G
Sbjct: 134 ALNLHIYTG 142
>AT5G40980.1 | chr5:16414877-16415086 REVERSE LENGTH=70
Length = 69
Score = 74.7 bits (182), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 2 ADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHS 48
ADWGPV + + LFILLSPGLLFQ+P + R++EFGN TSG+SILVH+
Sbjct: 3 ADWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHA 49
>AT3G27027.1 | chr3:9971921-9972130 FORWARD LENGTH=70
Length = 69
Score = 74.7 bits (182), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 2 ADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXXX 61
DWGPV + + LFILLSPGLLFQ+P + R+VEFGN TSG++ILVH+
Sbjct: 3 TDWGPVIVAVSLFILLSPGLLFQLPARTRVVEFGNMTTSGIAILVHAFIYFCILTILVIA 62
Query: 62 VNVHMY 67
+ +H++
Sbjct: 63 IQIHIH 68
>AT3G01950.1 | chr3:324026-324238 FORWARD LENGTH=71
Length = 70
Score = 71.2 bits (173), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 3 DWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXXXV 62
DWGPV + ++ FI+LSPG+LFQ+PGK + VEFG FQTSG SI++H+ +
Sbjct: 4 DWGPVLMSVIFFIVLSPGVLFQLPGKSKAVEFGGFQTSGPSIVIHTLLFFAFITISLIAL 63
Query: 63 NVHMY 67
++H+Y
Sbjct: 64 HIHIY 68
>AT5G14110.1 | chr5:4553964-4554176 REVERSE LENGTH=71
Length = 70
Score = 70.9 bits (172), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%)
Query: 3 DWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXXXV 62
+WGPV + + LFI+L+PG+LFQ+PGK ++VEFG FQTSG +I++H+ +
Sbjct: 4 NWGPVLMSVFLFIVLTPGVLFQLPGKTKVVEFGGFQTSGAAIVIHTLIFFACITVSIIAL 63
Query: 63 NVHMYLG 69
++H+Y+
Sbjct: 64 HIHIYVA 70
>AT5G40970.1 | chr5:16414081-16414290 FORWARD LENGTH=70
Length = 69
Score = 65.9 bits (159), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXX 60
MADW PV +G+VLF++LSPGLLF +PG ++FG +T+G +I VH+
Sbjct: 1 MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIFFAAYTILIL 60
Query: 61 XVNVHMYLG 69
VN+H+ G
Sbjct: 61 AVNLHITTG 69
>AT3G01940.1 | chr3:322841-323053 REVERSE LENGTH=71
Length = 70
Score = 58.9 bits (141), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 2 ADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXXX 61
ADWGPV + +VLF++LSPGLLFQ+P + R++E GN TSG+SILVH+
Sbjct: 4 ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63
Query: 62 VNVHMYL 68
+ +H+++
Sbjct: 64 IQIHIHI 70
>AT5G50660.1 | chr5:20612575-20612778 FORWARD LENGTH=68
Length = 67
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHS 48
M +W PV + VLF++LSPGLLFQ+PG V+FG +TSG SIL+H+
Sbjct: 1 MTEWLPVVVATVLFVVLSPGLLFQVPGNNNFVDFGKMETSGYSILLHA 48
>AT5G50560.1 | chr5:20579233-20579436 FORWARD LENGTH=68
Length = 67
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHS 48
M +W PV + VLF++LSPGLLFQ+PG V+FG +TSG SIL+H+
Sbjct: 1 MTEWLPVVVATVLFVVLSPGLLFQVPGNNNFVDFGKMETSGYSILLHA 48
>AT5G40960.1 | chr5:16412745-16412951 REVERSE LENGTH=69
Length = 68
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 33/67 (49%)
Query: 1 MADWGPVFIGLVLFILLSPGLLFQIPGKGRIVEFGNFQTSGLSILVHSXXXXXXXXXXXX 60
M DW I LF LSPGL+ Q PGK V F N +T+ SI VH+
Sbjct: 1 MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVHTVLYGLFLILFLV 60
Query: 61 XVNVHMY 67
+NVH+Y
Sbjct: 61 VLNVHVY 67
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.330 0.151 0.476
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,160,579
Number of extensions: 32121
Number of successful extensions: 61
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 14
Length of query: 69
Length of database: 11,106,569
Length adjustment: 41
Effective length of query: 28
Effective length of database: 9,982,513
Effective search space: 279510364
Effective search space used: 279510364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 104 (44.7 bits)